RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 STAU1O95793 577 aaKnown RBP15.27■□□□□ 0.04
HDAC4-205ENST00000454542 TNNC2P02585 160 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 DLATP10515 647 aaKnown RBP15.27■□□□□ 0.04
HDAC4-205ENST00000454542 PPP1R2P41236 205 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 MTHFRP42898 656 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 RBP5P82980 135 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 CTXN3Q4LDR2 81 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 C1orf220Q5T0J3 134 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 OVOS1Q6IE37 1185 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 RTL10Q7L3V2 364 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 SPATA18Q8TC71 538 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 TMC2Q8TDI7 906 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 ZNF516Q92618 1163 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 GBP4Q96PP9 640 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 RTP3Q9BQQ7 232 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 MKNK1Q9BUB5 465 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 PHF7Q9BWX1 381 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-205ENST00000454542 DSEQ9UL01 958 aa15.27■□□□□ 0.04
HDAC4-205ENST00000454542 TIMM13Q9Y5L4 95 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-205ENST00000454542 OR6C75A6NL08 312 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 CYB561D2O14569 222 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 RFPL2O75678 378 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 VNN2O95498 520 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 C8AP07357 584 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 CD44P16070 742 aaKnown RBP15.26■□□□□ 0.03
HDAC4-205ENST00000454542 AP3M2P53677 418 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 PMS1P54277 932 aaKnown RBP15.26■□□□□ 0.03
HDAC4-205ENST00000454542 LRRC63Q05C16 580 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 TPGS2Q68CL5 300 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 CES5AQ6NT32 575 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 CSGALNACT2Q8N6G5 542 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 TRIML1Q8N9V2 468 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 OR10T2Q8NGX3 314 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 ZNF461Q8TAF7 563 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 CCDC127Q96BQ5 260 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 RIPOR3Q96MK2 946 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 POP1Q99575 1024 aaKnown RBP15.26■□□□□ 0.03
HDAC4-205ENST00000454542 APOL5Q9BWW9 433 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 CLSTN2Q9H4D0 955 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 POMKQ9H5K3 350 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 VRTNQ9H8Y1 702 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 MAFFQ9ULX9 164 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 L1RE1Q9UN81 338 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 FRMD4BQ9Y2L6 1034 aa15.26■□□□□ 0.03
HDAC4-205ENST00000454542 LOC730098B7Z3J9 87 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 HNRNPA1P09651 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
HDAC4-205ENST00000454542 ATF2P15336 505 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 TNNI1P19237 187 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 CCNE1P24864 410 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 RPL13P26373 211 aaKnown RBP15.25■□□□□ 0.03
HDAC4-205ENST00000454542 DLG4P78352 724 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 BFSP1Q12934 665 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 UVSSAQ2YD98 709 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 LIN9Q5TKA1 542 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 TDRD10Q5VZ19 366 aaKnown RBP15.25■□□□□ 0.03
HDAC4-205ENST00000454542 CEP135Q66GS9 1140 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 TMC5Q6UXY8 1006 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 INTS8Q75QN2 995 aaKnown RBP15.25■□□□□ 0.03
HDAC4-205ENST00000454542 USP37Q86T82 979 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 TCEAL8Q8IYN2 117 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 TOP6BLQ8N6T0 577 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 XYLT2Q9H1B5 865 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 CD320Q9NPF0 282 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 KIAA1468Q9P260 1216 aa15.25■□□□□ 0.03
HDAC4-205ENST00000454542 AFF4Q9UHB7 1163 aaKnown RBP15.25■□□□□ 0.03
HDAC4-205ENST00000454542 NCOR1O75376 2440 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 TRIM49BA6NDI0 452 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 PPP1R3GB7ZBB8 358 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 PSMA7O14818 248 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 SLC16A3O15427 465 aaKnown RBP15.24■□□□□ 0.03
HDAC4-205ENST00000454542 C4BPAP04003 597 aaKnown RBP15.24■□□□□ 0.03
HDAC4-205ENST00000454542 KRT19P08727 400 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 SPATA31D3P0C874 917 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 PSMC2P35998 433 aaKnown RBP15.24■□□□□ 0.03
HDAC4-205ENST00000454542 ADAM9Q13443 819 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 ZACNQ401N2 412 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 WSCD1Q658N2 575 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 SPATA31D4Q6ZUB0 917 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 FAM186BQ8IYM0 893 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 TMEM86AQ8N2M4 240 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 PDCL2Q8N4E4 241 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 SLC7A14Q8TBB6 771 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 DHTKD1Q96HY7 919 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-205ENST00000454542 HPDLQ96IR7 371 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 PRKD2Q9BZL6 878 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 ZCWPW1Q9H0M4 648 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 NOTCH4Q99466 2003 aa15.24■□□□□ 0.03
HDAC4-205ENST00000454542 CLUHO75153 1309 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 CCDC195A0A1B0GUA6 201 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 MTMR11A4FU01 709 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 GABRDO14764 452 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 IKBKBO14920 756 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 VNN1O95497 513 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 CST3P01034 146 aaPredicted RBP15.23■□□□□ 0.03
HDAC4-205ENST00000454542 WEE2P0C1S8 567 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 CPB1P15086 417 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 ATICP31939 592 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 FKBP3Q00688 224 aaKnown RBP15.23■□□□□ 0.03
HDAC4-205ENST00000454542 MYO1EQ12965 1108 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 GPR17Q13304 367 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms