RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 CCNE1P24864 410 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 RHDQ02161 417 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 TMEM62Q0P6H9 643 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 AP3B2Q13367 1082 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 MTX1Q13505 466 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 SCARA3Q6AZY7 606 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 KCNV1Q6PIU1 500 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 NFXL1Q6ZNB6 911 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 TAS1R1Q7RTX1 841 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 GRASPQ7Z6J2 395 aaPredicted RBP6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 TICAM1Q8IUC6 712 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 CHMP4CQ96CF2 233 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 RPS6KC1Q96S38 1066 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 RMDN3Q96TC7 470 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 SPOCK3Q9BQ16 436 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 PLEKHA4Q9H4M7 779 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 ARMT1Q9H993 441 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 PIDD1Q9HB75 910 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 ZNF334Q9HCZ1 680 aaPredicted RBP6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 DPP7Q9UHL4 492 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 TUBE1Q9UJT0 475 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 PIAS3Q9Y6X2 628 aa6.08□□□□□ -1.44
SBDSP1-204ENST00000453858 SVILO95425 2214 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 ZNF532Q9HCE3 1301 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 DENND3A2RUS2 1198 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 SUV39H1O43463 412 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 GAS2O43903 313 aaKnown RBP6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 SH3BP5O60239 455 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 GJB3O75712 270 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 GLUD1P00367 558 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 PROCP04070 461 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 CYP11A1P05108 521 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 SPATA31C1P0DKV0 1188 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 MYF5P13349 255 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 SLC16A2P36021 539 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 IKQ13123 557 aaPredicted RBP6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 PWP1Q13610 501 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 ELF2Q15723 593 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 GRIK4Q16099 956 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 TNNI3KQ59H18 835 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 SLC9C2Q5TAH2 1124 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 PMS2CLQ68D20 193 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 ZNF746Q6NUN9 644 aaPredicted RBP6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 TXNDC11Q6PKC3 985 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 IGF2-ASQ6U949 168 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 AGMOQ6ZNB7 445 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 VSIG10LQ86VR7 867 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 FMR1NBQ8N0W7 255 aaPredicted RBP6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 SNRNP27Q8WVK2 155 aaKnown RBP6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 ELSPBP1Q96BH3 223 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 NACC1Q96RE7 527 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 BACH2Q9BYV9 841 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 TMEM74BQ9NUR3 256 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 POLR3BQ9NW08 1133 aaPredicted RBP6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 DBNLQ9UJU6 430 aaKnown RBP6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 FPGT-TNNI3KV9GXZ4 949 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 CCDC168Q8NDH2 2452 aa6.07□□□□□ -1.44
SBDSP1-204ENST00000453858 ZNF469Q96JG9 3925 aaPredicted RBP6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 MED13LQ71F56 2210 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 COL6A5A8TX70 2615 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 E9PAM4 449 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 SCAMP3O14828 347 aaKnown RBP6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 TGM5O43548 720 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 ADAM23O75077 832 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 RPLP2P05387 115 aaKnown RBP6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 C8AP07357 584 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 TNFRSF8P28908 595 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 CD68P34810 354 aaPredicted RBP6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 NOVP48745 357 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 CXADRP78310 365 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 PPFIA1Q13136 1202 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 LRRC32Q14392 662 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 SETDB1Q15047 1291 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 WDR43Q15061 677 aaKnown RBP eCLIP6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 SBK1Q52WX2 424 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 TRIM61Q5EBN2 209 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 DGKKQ5KSL6 1271 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 SLC23A3Q6PIS1 610 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 ADAMTSL4Q6UY14 1074 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 ECHDC2Q86YB7 292 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 RNF168Q8IYW5 571 aaPredicted RBP6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 SYNPOQ8N3V7 929 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 CAMKK1Q8N5S9 505 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 DAGLBQ8NCG7 672 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 PI4K2AQ9BTU6 479 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 FAM49AQ9H0Q0 323 aaPredicted RBP6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 NRDE2Q9H7Z3 1164 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 MLXIPQ9HAP2 919 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 PXMP2Q9NR77 195 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 CHST12Q9NRB3 414 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 MRPL17Q9NRX2 175 aaKnown RBP6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 EBF1Q9UH73 591 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 GPN3Q9UHW5 284 aaPredicted RBP6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 PCDHA2Q9Y5H9 948 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 MED13Q9UHV7 2174 aa6.06□□□□□ -1.44
SBDSP1-204ENST00000453858 KNL1Q8NG31 2342 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 RP1L1Q8IWN7 2480 aaPredicted RBP6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 WDR19Q8NEZ3 1342 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 B4E1Z4 1266 aa6.05□□□□□ -1.44
SBDSP1-204ENST00000453858 SRGAP3O43295 1099 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms