RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ALG6Q9Y672 507 aa15.24■□□□□ 0.03
CALD1-207ENST00000430085 RECQL4O94761 1208 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 HMGCRP04035 888 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 ASGR1P07306 291 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 CFHP08603 1231 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 BRD2P25440 801 aaKnown RBP15.23■□□□□ 0.03
CALD1-207ENST00000430085 GRK4P32298 578 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 TNNC1P63316 161 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 MYO1EQ12965 1108 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 BRD3Q15059 726 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 TMEM130Q8N3G9 435 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 PXYLP1Q8TE99 480 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 SH3TC2Q8TF17 1288 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 CYP3A43Q9HB55 503 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 AVENQ9NQS1 362 aaPredicted RBP15.23■□□□□ 0.03
CALD1-207ENST00000430085 ADAM22Q9P0K1 906 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 CEP83Q9Y592 693 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 TRPV2Q9Y5S1 764 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 RALGAPA2Q2PPJ7 1873 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 SCN10AQ9Y5Y9 1956 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 MIF4GDA9UHW6 222 aaKnown RBP15.23■□□□□ 0.03
CALD1-207ENST00000430085 MED7O43513 233 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 LSM8O95777 96 aaKnown RBP15.23■□□□□ 0.03
CALD1-207ENST00000430085 RPLP2P05387 115 aaKnown RBP15.23■□□□□ 0.03
CALD1-207ENST00000430085 CDH8P55286 799 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 RNASE9P60153 205 aaKnown RBP15.23■□□□□ 0.03
CALD1-207ENST00000430085 KCNA10Q16322 511 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 PKN2Q16513 984 aaKnown RBP15.23■□□□□ 0.03
CALD1-207ENST00000430085 MON1BQ7L1V2 547 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 PHF13Q86YI8 300 aaPredicted RBP15.23■□□□□ 0.03
CALD1-207ENST00000430085 UBL4BQ8N7F7 174 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 PCSK9Q8NBP7 692 aaKnown RBP15.23■□□□□ 0.03
CALD1-207ENST00000430085 SLAIN1Q8ND83 568 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 BEST2Q8NFU1 509 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 ACTRT1Q8TDG2 376 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 UBE2Q2Q8WVN8 375 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 VCPIP1Q96JH7 1222 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 RPS6KC1Q96S38 1066 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 PNKPQ96T60 521 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 C11orf70Q9BRQ4 267 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 SMYD3Q9H7B4 428 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 RAB21Q9UL25 225 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 CDY2AQ9Y6F7 541 aa15.23■□□□□ 0.03
CALD1-207ENST00000430085 TARSL2A2RTX5 802 aaKnown RBP15.22■□□□□ 0.03
CALD1-207ENST00000430085 CCDC151A5D8V7 595 aa15.22■□□□□ 0.03
CALD1-207ENST00000430085 PGRMC1O00264 195 aaKnown RBP15.22■□□□□ 0.03
CALD1-207ENST00000430085 ERLIN1O75477 346 aa15.22■□□□□ 0.03
CALD1-207ENST00000430085 STAU1O95793 577 aaKnown RBP15.22■□□□□ 0.03
CALD1-207ENST00000430085 CD19P15391 556 aa15.22■□□□□ 0.03
CALD1-207ENST00000430085 RRM1P23921 792 aa15.22■□□□□ 0.03
CALD1-207ENST00000430085 AKAP5P24588 427 aa15.22■□□□□ 0.03
CALD1-207ENST00000430085 MCM3P25205 808 aa15.22■□□□□ 0.03
CALD1-207ENST00000430085 TWF2Q6IBS0 349 aaKnown RBP15.22■□□□□ 0.03
CALD1-207ENST00000430085 TMEM35BQ8NCS4 154 aa15.22■□□□□ 0.03
CALD1-207ENST00000430085 MCOLN1Q9GZU1 580 aa15.22■□□□□ 0.03
CALD1-207ENST00000430085 RBM12Q9NTZ6 932 aaKnown RBP15.22■□□□□ 0.03
CALD1-207ENST00000430085 CNTN3Q9P232 1028 aa15.22■□□□□ 0.03
CALD1-207ENST00000430085 PARP2Q9UGN5 583 aa15.22■□□□□ 0.03
CALD1-207ENST00000430085 TLR3O15455 904 aaKnown RBP15.21■□□□□ 0.03
CALD1-207ENST00000430085 DDX3YO15523 660 aaKnown RBP15.21■□□□□ 0.03
CALD1-207ENST00000430085 SPOPO43791 374 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 PAEPP09466 180 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 COMTP21964 271 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 CST5P28325 142 aaPredicted RBP15.21■□□□□ 0.03
CALD1-207ENST00000430085 C1QBPQ07021 282 aaKnown RBP15.21■□□□□ 0.03
CALD1-207ENST00000430085 MMS22LQ6ZRQ5 1243 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 SERINC5Q86VE9 423 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 FAM228AQ86W67 206 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 TTC39CQ8N584 583 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 USP38Q8NB14 1042 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 KLHDC9Q8NEP7 349 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 BTBD6Q96KE9 485 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 ZMAT2Q96NC0 199 aaKnown RBP15.21■□□□□ 0.03
CALD1-207ENST00000430085 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.21■□□□□ 0.032e-7■□□□□ 11.1
CALD1-207ENST00000430085 ZNF518BQ9C0D4 1074 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 SDCBP2Q9H190 292 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 MRPL47Q9HD33 250 aaKnown RBP15.21■□□□□ 0.03
CALD1-207ENST00000430085 ARFGAP3Q9NP61 516 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 ANAPC7Q9UJX3 599 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 PCDHGC3Q9UN70 934 aa15.21■□□□□ 0.03
CALD1-207ENST00000430085 NOC2LQ9Y3T9 749 aaKnown RBP15.21■□□□□ 0.03
CALD1-207ENST00000430085 XPOTO43592 962 aaKnown RBP15.21■□□□□ 0.02
CALD1-207ENST00000430085 INHAP05111 366 aa15.21■□□□□ 0.02
CALD1-207ENST00000430085 C2CD6Q53TS8 623 aa15.21■□□□□ 0.02
CALD1-207ENST00000430085 GLRA4Q5JXX5 417 aa15.21■□□□□ 0.02
CALD1-207ENST00000430085 UBXN11Q5T124 520 aa15.21■□□□□ 0.02
CALD1-207ENST00000430085 COL13A1Q5TAT6 717 aaPredicted RBP15.21■□□□□ 0.02
CALD1-207ENST00000430085 ALKAL1Q6UXT8 129 aa15.21■□□□□ 0.02
CALD1-207ENST00000430085 PHLDB2Q86SQ0 1253 aa15.21■□□□□ 0.02
CALD1-207ENST00000430085 SESTD1Q86VW0 696 aa15.21■□□□□ 0.02
CALD1-207ENST00000430085 WNT8AQ9H1J5 351 aa15.21■□□□□ 0.02
CALD1-207ENST00000430085 CARD9Q9H257 536 aa15.21■□□□□ 0.02
CALD1-207ENST00000430085 CXCL16Q9H2A7 254 aa15.21■□□□□ 0.02
CALD1-207ENST00000430085 FAM124BQ9H5Z6 455 aaPredicted RBP15.21■□□□□ 0.02
CALD1-207ENST00000430085 DDX20Q9UHI6 824 aaKnown RBP15.21■□□□□ 0.02
CALD1-207ENST00000430085 UBQLN1Q9UMX0 589 aaKnown RBP15.21■□□□□ 0.02
CALD1-207ENST00000430085 SCINQ9Y6U3 715 aa15.21■□□□□ 0.02
CALD1-207ENST00000430085 CILPO75339 1184 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 RPS6KA5O75582 802 aa15.2■□□□□ 0.02
CALD1-207ENST00000430085 CALB1P05937 261 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms