RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 CAMKK2Q96RR4 588 aa20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 EBF2Q9HAK2 575 aa20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 RNF146Q9NTX7 359 aa20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 ZNF148Q9UQR1 794 aa20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 PTPRJQ12913 1337 aa20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 MAFGO15525 162 aa20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 ATF7P17544 494 aaPredicted RBP20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 FOXN2P32314 431 aa20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 FAM47EQ6ZV65 393 aa20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 RCOR2Q8IZ40 523 aa20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 FBF1Q8TES7 1133 aa20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 APOBEC3GQ9HC16 384 aaKnown RBP20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 UBN1Q9NPG3 1134 aa20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 STK38LQ9Y2H1 464 aa20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.12■□□□□ 0.81
TNFRSF8-202ENST00000413146 FER1L6Q2WGJ9 1857 aa20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 PI4K2BG5E9Z4 385 aa20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 KCNA2P16389 499 aa20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 TBXAS1P24557 533 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 CCDC15Q0P6D6 951 aa20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 ACCSLQ4AC99 568 aa20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 ASRGL1Q7L266 308 aa20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 TRABD2AQ86V40 505 aa20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 RPAP3Q9H6T3 665 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 JPH1Q9HDC5 661 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 ZNF277Q9NRM2 450 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 RBAKQ9NYW8 714 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 DNPEPQ9ULA0 475 aa20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 L3MBTL1Q9Y468 752 aa20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 NFASCO94856 1347 aa20.11■□□□□ 0.81
TNFRSF8-202ENST00000413146 TJP3O95049 919 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 KRT1P04264 644 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 KRT10P13645 584 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 WDR4P57081 412 aaKnown RBP20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 MGAT5Q09328 741 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 MYO1EQ12965 1108 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 MTERF2Q49AM1 385 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 EAPPQ56P03 285 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 TLDC1Q6P9B6 456 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 ECHDC2Q86YB7 292 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 CCDC60Q8IWA6 550 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 RSRC1Q96IZ7 334 aaKnown RBP20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 FHDC1Q9C0D6 1143 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 SCAF8Q9UPN6 1271 aaKnown RBP20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 POC1B-GALNT4F8VUJ3 575 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 SPAG7O75391 227 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 RPSAP08865 295 aaKnown RBP20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 SKIV2L2P42285 1042 aaKnown RBP20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 MSH2P43246 934 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 ARSEP51690 589 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 EN1Q05925 392 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 MTMR2Q13614 643 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 SLITRK1Q96PX8 696 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 KCNG1Q9UIX4 513 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 COL4A5P29400 1685 aa20.1■□□□□ 0.81
TNFRSF8-202ENST00000413146 MYH9P35579 1960 aaKnown RBP20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 CCNB1P14635 433 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 NOP14P78316 857 aaKnown RBP20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 LACTBP83111 547 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 ATP13A4Q4VNC1 1196 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 DRICH1Q6PGQ1 229 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 TDRPQ86YL5 185 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 RTKN2Q8IZC4 609 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 GLIS1Q8NBF1 620 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 PRCCQ92733 491 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 L3MBTL3Q96JM7 780 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 TRABDQ9H4I3 376 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 NOP53Q9NZM5 478 aaKnown RBP20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 SLC9A2Q9UBY0 812 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 STYXL1Q9Y6J8 313 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 VWA5AO00534 786 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 WNT10BO00744 389 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 ANP32DO95626 131 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 ASMTLO95671 621 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 PECAM1P16284 738 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 KRT15P19012 456 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 CCND1P24385 295 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 POLGP54098 1239 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 RPL7AP62424 266 aaKnown RBP20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 GPS1Q13098 491 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 SPARCL1Q14515 664 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 EMC2Q15006 297 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 ALLCQ8N6M5 410 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 AGBL3Q8NEM8 1001 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 TRIM33Q9UPN9 1127 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 C15orf41Q9Y2V0 281 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 STARD13Q9Y3M8 1113 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 TELO2Q9Y4R8 837 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 RIPK3Q9Y572 518 aa20.09■□□□□ 0.81
TNFRSF8-202ENST00000413146 PRPF4O43172 522 aaKnown RBP eCLIP20.08■□□□□ 0.81
TNFRSF8-202ENST00000413146 UNC5CO95185 931 aa20.08■□□□□ 0.81
TNFRSF8-202ENST00000413146 ZSCAN5DPP0CG00 497 aa20.08■□□□□ 0.81
TNFRSF8-202ENST00000413146 GCAP28676 217 aa20.08■□□□□ 0.81
TNFRSF8-202ENST00000413146 CLNS1AP54105 237 aaKnown RBP20.08■□□□□ 0.81
TNFRSF8-202ENST00000413146 MCL1Q07820 350 aa20.08■□□□□ 0.81
TNFRSF8-202ENST00000413146 SETDB1Q15047 1291 aa20.08■□□□□ 0.81
TNFRSF8-202ENST00000413146 MFSD7Q6UXD7 560 aa20.08■□□□□ 0.81
TNFRSF8-202ENST00000413146 NSMCE1Q8WV22 266 aa20.08■□□□□ 0.81
TNFRSF8-202ENST00000413146 ATG4CQ96DT6 458 aa20.08■□□□□ 0.81
TNFRSF8-202ENST00000413146 SMC6Q96SB8 1091 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms