RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 CDR1P51861 262 aa17.23■□□□□ 0.35
CDKN1A-203ENST00000405375 ITGA8P53708 1063 aa17.23■□□□□ 0.35
CDKN1A-203ENST00000405375 ZNF252P-AS1Q0IIN9 211 aa17.23■□□□□ 0.35
CDKN1A-203ENST00000405375 TRIP13Q15645 432 aaPredicted RBP17.23■□□□□ 0.35
CDKN1A-203ENST00000405375 QPCTQ16769 361 aa17.23■□□□□ 0.35
CDKN1A-203ENST00000405375 DUOXA2Q1HG44 320 aa17.23■□□□□ 0.35
CDKN1A-203ENST00000405375 SGSM1Q2NKQ1 1148 aa17.23■□□□□ 0.35
CDKN1A-203ENST00000405375 PLPPR4Q7Z2D5 763 aa17.23■□□□□ 0.35
CDKN1A-203ENST00000405375 ZBTB8OSQ8IWT0 167 aa17.23■□□□□ 0.35
CDKN1A-203ENST00000405375 PTPRHQ9HD43 1115 aa17.23■□□□□ 0.35
CDKN1A-203ENST00000405375 CISHQ9NSE2 258 aa17.23■□□□□ 0.35
CDKN1A-203ENST00000405375 DDX20Q9UHI6 824 aaKnown RBP17.23■□□□□ 0.35
CDKN1A-203ENST00000405375 CHN1P15882 459 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 CD58P19256 250 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 SLCO1A2P46721 670 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 CAV1Q03135 178 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 ATXN2LQ8WWM7 1075 aaKnown RBP17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 CCDC114Q96M63 670 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 TRAIPQ9BWF2 469 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 TXNRD2Q9NNW7 524 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 USTQ9Y2C2 406 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 SLC25A27O95847 323 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 CALB1P05937 261 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 ATF2P15336 505 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 TCF4P15884 667 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 BRD2P25440 801 aaKnown RBP17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 CDH5P33151 784 aaPredicted RBP17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 NF2P35240 595 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 PLCB4Q15147 1175 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 SURF1Q15526 300 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 KCNV1Q6PIU1 500 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 TSHZ1Q6ZSZ6 1077 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 ARMC9Q7Z3E5 817 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 EXOC8Q8IYI6 725 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 XYLT2Q9H1B5 865 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 C2orf40Q9H1Z8 148 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 ELP3Q9H9T3 547 aa17.22■□□□□ 0.35
CDKN1A-203ENST00000405375 DNAJC25-GNG10A0A024R161 153 aa17.21■□□□□ 0.35
CDKN1A-203ENST00000405375 LIG3P49916 1009 aa17.21■□□□□ 0.35
CDKN1A-203ENST00000405375 NFX1Q12986 1120 aaKnown RBP17.21■□□□□ 0.35
CDKN1A-203ENST00000405375 WDTC1Q8N5D0 677 aa17.21■□□□□ 0.35
CDKN1A-203ENST00000405375 FAM212AQ96EL1 285 aa17.21■□□□□ 0.35
CDKN1A-203ENST00000405375 FAM118BQ9BPY3 351 aa17.21■□□□□ 0.35
CDKN1A-203ENST00000405375 ZNF518BQ9C0D4 1074 aa17.21■□□□□ 0.35
CDKN1A-203ENST00000405375 STMN4Q9H169 189 aaPredicted RBP17.21■□□□□ 0.35
CDKN1A-203ENST00000405375 FZD8Q9H461 694 aa17.21■□□□□ 0.35
CDKN1A-203ENST00000405375 NOP56O00567 594 aaKnown RBP17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 DDNO94850 711 aaPredicted RBP17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 KIAA0754O94854 1291 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 ACSL3O95573 720 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 TTC4O95801 387 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 DRD4P21917 467 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 GJC1P36383 396 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 ADCY8P40145 1251 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 ASPAP45381 313 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 ATP13A4Q4VNC1 1196 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 PPP1R15BQ5SWA1 713 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 LRRC38Q5VT99 294 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 SMYD5Q6GMV2 418 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 CCDC62Q6P9F0 684 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 MPZL3Q6UWV2 235 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 SULF1Q8IWU6 871 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 TMEM35BQ8NCS4 154 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 TFAP2BQ92481 460 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 UPF1Q92900 1129 aaKnown RBP eCLIP17.21■□□□□ 0.344e-7■■□□□ 11.4
CDKN1A-203ENST00000405375 CLMNQ96JQ2 1002 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 SCLT1Q96NL6 688 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 ZNF317Q96PQ6 595 aaPredicted RBP17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 PCDHGC3Q9UN70 934 aa17.21■□□□□ 0.34
CDKN1A-203ENST00000405375 ACKR2O00590 384 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 CXCL11O14625 94 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 B4GALT4O60513 344 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 KLRC2P26717 231 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 SSR1P43307 286 aaKnown RBP17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 IREB2P48200 963 aaKnown RBP17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 TFAMQ00059 246 aaKnown RBP17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 OGDHQ02218 1023 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 Q3C1V9 767 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 ZNF394Q53GI3 561 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 GPAT2Q6NUI2 795 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 PACS2Q86VP3 889 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 ERO1BQ86YB8 467 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 RHPN2Q8IUC4 686 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 RCOR2Q8IZ40 523 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 OTUD6BQ8N6M0 293 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 CCDC89Q8N998 374 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 CHMP6Q96FZ7 201 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 SLITRK1Q96PX8 696 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 MPHOSPH6Q99547 160 aaKnown RBP17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 SELENOSQ9BQE4 189 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 ADARB2Q9NS39 739 aaKnown RBP17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 RBPJLQ9UBG7 517 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 ANAPC5Q9UJX4 755 aa17.2■□□□□ 0.34
CDKN1A-203ENST00000405375 GJB1P08034 283 aa17.19■□□□□ 0.34
CDKN1A-203ENST00000405375 WEE2P0C1S8 567 aa17.19■□□□□ 0.34
CDKN1A-203ENST00000405375 EIF4BP23588 611 aaKnown RBP17.19■□□□□ 0.34
CDKN1A-203ENST00000405375 IFT88Q13099 833 aa17.19■□□□□ 0.34
CDKN1A-203ENST00000405375 TRPC3Q13507 836 aa17.19■□□□□ 0.34
CDKN1A-203ENST00000405375 LONRF1Q17RB8 773 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms