RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 CLEC10AQ8IUN9 316 aa12.65□□□□□ -0.39
CACNA1C-213ENST00000399629 SNF8Q96H20 258 aa12.65□□□□□ -0.39
CACNA1C-213ENST00000399629 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.65□□□□□ -0.39
CACNA1C-213ENST00000399629 SNX5Q9Y5X3 404 aa12.65□□□□□ -0.39
CACNA1C-213ENST00000399629 ADGRA2Q96PE1 1338 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 USP42Q9H9J4 1324 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 PP2D1A8MPX8 630 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 EXTL3O43909 919 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 LUC7L3O95232 432 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 VTNP04004 478 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 UGT3A1Q6NUS8 523 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 CEP68Q76N32 757 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 RCOR2Q8IZ40 523 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 RBBP8NLQ8NC74 664 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 RPRD1AQ96P16 312 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 MYRIPQ8NFW9 859 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 FBXO41Q8TF61 875 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 GPRASP2Q96D09 838 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 MCEEQ96PE7 176 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 ZFATQ9P243 1243 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 TET3O43151 1660 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 SLC16A3O15427 465 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 ABCE1P61221 599 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 TRADDQ15628 312 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 SNRNP35Q16560 246 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 KRT35Q92764 455 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 THOC1Q96FV9 657 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 WDCPQ9H6R7 721 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 CASP1P29466 404 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 SLC8A1P32418 973 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 ARSEP51690 589 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 SNCBQ16143 134 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 PTGISQ16647 500 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 DEFB115Q30KQ5 88 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 SYCP2LQ5T4T6 812 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 CPB2Q96IY4 423 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 PDE11AQ9HCR9 933 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 CYB561D2O14569 222 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 AP1G2O75843 785 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 GRK3P35626 688 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 MAPRE2Q15555 327 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 LRRC8EQ6NSJ5 796 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 AGR3Q8TD06 166 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 FHOD1Q9Y613 1164 aa12.64□□□□□ -0.39
CACNA1C-213ENST00000399629 CLTCQ00610 1675 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 PSMA3P25788 255 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 SLC1A1P43005 524 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 RASIP1Q5U651 963 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 ALS2CLQ60I27 953 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 PRR23CQ6ZRP0 262 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 VSTM4Q8IW00 320 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 SPASTQ9UBP0 616 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 ADCY10Q96PN6 1610 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 IGSF9BQ9UPX0 1349 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 LGALS16A8MUM7 142 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 FKTNO75072 461 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 THP07101 528 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 SCP2P22307 547 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 NUDCD3Q8IVD9 361 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 BRD8Q9H0E9 1235 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 NMRK2Q9NPI5 230 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 TPX2Q9ULW0 747 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 ADGRB3O60242 1522 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 PSMD12O00232 456 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 DCTN3O75935 186 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 RHOBTB1O94844 696 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 HPGDP15428 266 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 TCF3P15923 654 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 GRAMD1BQ3KR37 738 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 SGO1Q5FBB7 561 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 ZNF34Q8IZ26 560 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 CALML6Q8TD86 181 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 NLNQ9BYT8 704 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 CCDC90BQ9GZT6 254 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 KCND2Q9NZV8 630 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 APPL1Q9UKG1 709 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 ALKQ9UM73 1620 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 FRMD3A2A2Y4 597 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 ICAM1P05362 532 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 GPD1P21695 349 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 CAP2P40123 477 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 BACE1P56817 501 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 IFT88Q13099 833 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 PPP1R36Q96LQ0 422 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 CDK5RAP1Q96SZ6 601 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 GLIS2Q9BZE0 524 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 YY1AP1Q9H869 796 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 NFKBIL1Q9UBC1 381 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 C2orf81A6NN90 581 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 ZNF286BP0CG31 522 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 VCAM1P19320 739 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 FNDC3BQ53EP0 1204 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 SLC45A4Q5BKX6 768 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 USP50Q70EL3 339 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 PLEKHA8Q96JA3 519 aa12.63□□□□□ -0.39
CACNA1C-213ENST00000399629 SPAG7O75391 227 aa12.62□□□□□ -0.39
CACNA1C-213ENST00000399629 OXCT1P55809 520 aa12.62□□□□□ -0.39
CACNA1C-213ENST00000399629 TJAP1Q5JTD0 557 aa12.62□□□□□ -0.39
CACNA1C-213ENST00000399629 SRBD1Q8N5C6 995 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-213ENST00000399629 TDRD7Q8NHU6 1098 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms