RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 NPTX2P47972 431 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 PXNP49023 591 aaPredicted RBP16.33■□□□□ 0.2
SEC13-206ENST00000397102 PEX3P56589 373 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 DUSP4Q13115 394 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 MPZL3Q6UWV2 235 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 GAREM2Q75VX8 874 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 TAS1R3Q7RTX0 852 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 BPIFB1Q8TDL5 484 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 ZC3H10Q96K80 434 aaKnown RBP16.33■□□□□ 0.2
SEC13-206ENST00000397102 TCHPQ9BT92 498 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 ATXN3LQ9H3M9 355 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 VPS45Q9NRW7 570 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 ARHGAP28Q9P2N2 729 aa16.33■□□□□ 0.2
SEC13-206ENST00000397102 OR6C75A6NL08 312 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 ATG13O75143 517 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 OR52Z1P0C646 297 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 WEE1P30291 646 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
SEC13-206ENST00000397102 TNK2Q07912 1038 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 GPR17Q13304 367 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 COL9A2Q14055 689 aaPredicted RBP16.32■□□□□ 0.2
SEC13-206ENST00000397102 TRIM29Q14134 588 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 PTPAQ15257 358 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 ITPRIPL2Q3MIP1 535 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 ARHGAP15Q53QZ3 475 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 GPR158Q5T848 1215 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 RNF43Q68DV7 783 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 PSAPL1Q6NUJ1 521 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 PKN3Q6P5Z2 889 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 UNQ6494/PRO21346Q6UXR6 183 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 PSMG2Q969U7 264 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 TMEM209Q96SK2 561 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 SMOC1Q9H4F8 434 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 TUBGCP4Q9UGJ1 667 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 SLC8A2Q9UPR5 921 aa16.32■□□□□ 0.2
SEC13-206ENST00000397102 C1QTNF9BB2RNN3 333 aa16.31■□□□□ 0.2
SEC13-206ENST00000397102 PRAMEF12O95522 483 aa16.31■□□□□ 0.2
SEC13-206ENST00000397102 C1QTNF9P0C862 333 aa16.31■□□□□ 0.2
SEC13-206ENST00000397102 HARSP12081 509 aaKnown RBP16.31■□□□□ 0.2
SEC13-206ENST00000397102 GABRR2P28476 465 aa16.31■□□□□ 0.2
SEC13-206ENST00000397102 LRPAP1P30533 357 aa16.31■□□□□ 0.2
SEC13-206ENST00000397102 AARSP49588 968 aaKnown RBP eCLIP16.31■□□□□ 0.2
SEC13-206ENST00000397102 MCM2P49736 904 aa16.31■□□□□ 0.2
SEC13-206ENST00000397102 DMP1Q13316 513 aaPredicted RBP16.31■□□□□ 0.2
SEC13-206ENST00000397102 ORC2Q13416 577 aaPredicted RBP16.31■□□□□ 0.2
SEC13-206ENST00000397102 ECM1Q16610 540 aa16.31■□□□□ 0.2
SEC13-206ENST00000397102 SLC10A6Q3KNW5 377 aa16.31■□□□□ 0.2
SEC13-206ENST00000397102 CENPPQ6IPU0 288 aa16.31■□□□□ 0.2
SEC13-206ENST00000397102 DNAJB7Q7Z6W7 309 aaPredicted RBP16.31■□□□□ 0.2
SEC13-206ENST00000397102 KMT5AQ9NQR1 393 aa16.31■□□□□ 0.2
SEC13-206ENST00000397102 ZMIZ1Q9ULJ6 1067 aa16.31■□□□□ 0.2
SEC13-206ENST00000397102 RBM19Q9Y4C8 960 aaKnown RBP16.31■□□□□ 0.2
SEC13-206ENST00000397102 TIMM13Q9Y5L4 95 aaPredicted RBP16.31■□□□□ 0.2
SEC13-206ENST00000397102 CEP295Q9C0D2 2601 aa16.31■□□□□ 0.2
SEC13-206ENST00000397102 ATRXP46100 2492 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 ATG2BQ96BY7 2078 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 MTMR11A4FU01 709 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 CCT6AP40227 531 aaKnown RBP16.3■□□□□ 0.2
SEC13-206ENST00000397102 NOVA1P51513 510 aaKnown RBP16.3■□□□□ 0.2
SEC13-206ENST00000397102 FOSBP53539 338 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 GRSF1Q12849 480 aaKnown RBP eCLIP16.3■□□□□ 0.2
SEC13-206ENST00000397102 MYBPC2Q14324 1141 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 ANKRD1Q15327 319 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 PLK5Q496M5 336 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 TMEM196Q5HYL7 178 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 USP37Q86T82 979 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 ITIH5Q86UX2 942 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 DAW1Q8N136 415 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 CAMKK1Q8N5S9 505 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 KDF1Q8NAX2 398 aaPredicted RBP16.3■□□□□ 0.2
SEC13-206ENST00000397102 NSUN7Q8NE18 718 aaKnown RBP16.3■□□□□ 0.2
SEC13-206ENST00000397102 TASP1Q9H6P5 420 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 THG1LQ9NWX6 298 aaKnown RBP16.3■□□□□ 0.2
SEC13-206ENST00000397102 HSFX1Q9UBD0 423 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 KIAA1024Q9UPX6 916 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 SLC27A5Q9Y2P5 690 aa16.3■□□□□ 0.2
SEC13-206ENST00000397102 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.3■□□□□ 0.2
SEC13-206ENST00000397102 DENND4CQ5VZ89 1909 aa16.29■□□□□ 0.2
SEC13-206ENST00000397102 TSC2P49815 1807 aa16.29■□□□□ 0.2
SEC13-206ENST00000397102 TOM1L1O75674 476 aa16.29■□□□□ 0.2
SEC13-206ENST00000397102 NOLC1Q14978 699 aaKnown RBP eCLIP16.29■□□□□ 0.2
SEC13-206ENST00000397102 TCEAL6Q6IPX3 200 aa16.29■□□□□ 0.2
SEC13-206ENST00000397102 FSTL4Q6MZW2 842 aa16.29■□□□□ 0.2
SEC13-206ENST00000397102 NECAB1Q8N987 351 aa16.29■□□□□ 0.2
SEC13-206ENST00000397102 ATAD1Q8NBU5 361 aa16.29■□□□□ 0.2
SEC13-206ENST00000397102 TCEAL3Q969E4 200 aa16.29■□□□□ 0.2
SEC13-206ENST00000397102 GTF3C6Q969F1 213 aa16.29■□□□□ 0.2
SEC13-206ENST00000397102 ZBTB45Q96K62 511 aaPredicted RBP16.29■□□□□ 0.2
SEC13-206ENST00000397102 DRC1Q96MC2 740 aa16.29■□□□□ 0.2
SEC13-206ENST00000397102 EDEM2Q9BV94 578 aa16.29■□□□□ 0.2
SEC13-206ENST00000397102 PLEKHA5Q9HAU0 1116 aa16.29■□□□□ 0.2
SEC13-206ENST00000397102 MYH11P35749 1972 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 TRDMT1O14717 391 aaKnown RBP16.28■□□□□ 0.2
SEC13-206ENST00000397102 HIP1RO75146 1068 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 TYMPP19971 482 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 CYP3A5P20815 502 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 CDC25CP30307 473 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 CYP4F8P98187 520 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 ZNF174Q15697 407 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 ELF2Q15723 593 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms