RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 ACO1P21399 889 aaKnown RBP7.52□□□□□ -1.21
UPF2-203ENST00000397053 NMT1P30419 496 aaKnown RBP7.52□□□□□ -1.21
UPF2-203ENST00000397053 PNPLA4P41247 253 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 POU4F1Q01851 419 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 PTK6Q13882 451 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 P3H2Q8IVL5 708 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 CHST13Q8NET6 341 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 CERKQ8TCT0 537 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 PPP1R36Q96LQ0 422 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 DDX47Q9H0S4 455 aaKnown RBP7.52□□□□□ -1.21
UPF2-203ENST00000397053 EPN3Q9H201 632 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 ZNF70Q9UC06 446 aaPredicted RBP7.52□□□□□ -1.21
UPF2-203ENST00000397053 NDOR1Q9UHB4 597 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 ADGRA2Q96PE1 1338 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 AATKQ6ZMQ8 1374 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 SPTLC1O15269 473 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 MTSS1O43312 755 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 IL18RAPO95256 599 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 MAPK9P45984 424 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 SERPINB4P48594 390 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 MRPS15P82914 257 aaKnown RBP7.52□□□□□ -1.21
UPF2-203ENST00000397053 EMC2Q15006 297 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 HLA-DQA1Q5Y7H0 255 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 CCDC137Q6PK04 289 aaKnown RBP7.52□□□□□ -1.21
UPF2-203ENST00000397053 SAMD7Q7Z3H4 446 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 C1orf131Q8NDD1 294 aaKnown RBP7.52□□□□□ -1.21
UPF2-203ENST00000397053 ZNF555Q8NEP9 628 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 EXD1Q8NHP7 514 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 FBXO32Q969P5 355 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 TASP1Q9H6P5 420 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 VCPKMTQ9H867 229 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 TUFT1Q9NNX1 390 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 EVA1BQ9NVM1 165 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 THG1LQ9NWX6 298 aaKnown RBP7.52□□□□□ -1.21
UPF2-203ENST00000397053 SPATA31A3Q5VYP0 1347 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 F5H5T6 163 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 DAB1O75553 588 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 CYP7B1O75881 506 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 PTPN7P35236 360 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 HIRAP54198 1017 aaPredicted RBP7.52□□□□□ -1.21
UPF2-203ENST00000397053 EPHB3P54753 998 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 TGM3Q08188 693 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 MRPL28Q13084 256 aaKnown RBP7.52□□□□□ -1.21
UPF2-203ENST00000397053 SHROOM1Q2M3G4 852 aaPredicted RBP7.52□□□□□ -1.21
UPF2-203ENST00000397053 FBXW10Q5XX13 1052 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 SYTL1Q8IYJ3 562 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 PCYOX1LQ8NBM8 494 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 FAM151AQ8WW52 585 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 DEPDC7Q96QD5 511 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 CRAMP1Q96RY5 1269 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 MPP6Q9NZW5 540 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 RPS6KB2Q9UBS0 482 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 ZC3H7BQ9UGR2 993 aaKnown RBP7.52□□□□□ -1.21
UPF2-203ENST00000397053 PTCH1Q13635 1447 aa7.52□□□□□ -1.21
UPF2-203ENST00000397053 SEC24DO94855 1032 aaPredicted RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 MYL4P12829 197 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 RPS12P25398 132 aaKnown RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 YWHAQP27348 245 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 SERPINB10P48595 397 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 PMS2P54278 862 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 SGCGQ13326 291 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 PKP1Q13835 747 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 PTPAQ15257 358 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 RARS2Q5T160 578 aaKnown RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 SYCP2LQ5T4T6 812 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 DDX42Q86XP3 938 aaKnown RBP eCLIP7.51□□□□□ -1.21
UPF2-203ENST00000397053 ICA1LQ8NDH6 482 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 TBC1D16Q8TBP0 767 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 SPATA18Q8TC71 538 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 RFFLQ8WZ73 363 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 SNF8Q96H20 258 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 OSBPL5Q9H0X9 879 aaPredicted RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 GBA2Q9HCG7 927 aaPredicted RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 UBQLN1Q9UMX0 589 aaKnown RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 ENDOD1O94919 500 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 NPTXRO95502 500 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 ATP1A3P13637 1013 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 SPRP35270 261 aaPredicted RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 AP2B1P63010 937 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 PRKCEQ02156 737 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 ALDH6A1Q02252 535 aaKnown RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 GFPT1Q06210 699 aaPredicted RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 NOL9Q5SY16 702 aaKnown RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 EFL1Q7Z2Z2 1120 aaKnown RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 FGD2Q7Z6J4 655 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 RBBP8NLQ8NC74 664 aaPredicted RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 C20orf96Q9NUD7 363 aaPredicted RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 DDIT4Q9NX09 232 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 EIF2AK4Q9P2K8 1649 aaKnown RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 C2orf81A6NN90 581 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 GOLGA8TH3BQL2 631 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 CASP1P29466 404 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 YWHAZP63104 245 aaKnown RBP7.51□□□□□ -1.21
UPF2-203ENST00000397053 PDIA6Q15084 440 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 CTXN3Q4LDR2 81 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 SNX30Q5VWJ9 437 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 NAPEPLDQ6IQ20 393 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 ZNF544Q6NX49 715 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 HDDC2Q7Z4H3 204 aa7.51□□□□□ -1.21
UPF2-203ENST00000397053 PLEKHH3Q7Z736 793 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms