RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 RHOT2Q8IXI1 618 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 EXOC8Q8IYI6 725 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 CAGE1Q8TC20 777 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 SEC14L1Q92503 715 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 WNT8BQ93098 351 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 GDAP1L1Q96MZ0 367 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 RPS6KC1Q96S38 1066 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 KRT12Q99456 494 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 EIF2AQ9BY44 585 aaKnown RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 ARFGAP3Q9NP61 516 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 CISHQ9NSE2 258 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 C1orf112Q9NSG2 853 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 RNF19AQ9NV58 838 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 PRMT7Q9NVM4 692 aaPredicted RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 RNF14Q9UBS8 474 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 HPCAL4Q9UM19 191 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 GABRQQ9UN88 632 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 PCDHB4Q9Y5E5 795 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 IVNS1ABPQ9Y6Y0 642 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 REV3LO60673 3130 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 MANSC4A6NHS7 340 aaPredicted RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 TMEM110-MUSTN1A8MSY1 372 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 TULP1O00294 542 aaPredicted RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 TP73O15350 636 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 TREHO43280 583 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 NPTXRO95502 500 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 IGFBP6P24592 240 aaPredicted RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 BRD2P25440 801 aaKnown RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 CDH5P33151 784 aaPredicted RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 CTNNA1P35221 906 aaKnown RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 FLT3P36888 993 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 PHKA2P46019 1235 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 TM4SF4P48230 202 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 PDE6CP51160 858 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 RAD23BP54727 409 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 CDH8P55286 799 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 TFAMQ00059 246 aaKnown RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 TMEM62Q0P6H9 643 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 TRIM32Q13049 653 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 IRF5Q13568 498 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 MESDQ14696 234 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 TAF1CQ15572 869 aaPredicted RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 KIZQ2M2Z5 673 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 WDR44Q5JSH3 913 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 PLEKHA7Q6IQ23 1121 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 DENND1BQ6P3S1 775 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 CTU1Q7Z7A3 348 aaKnown RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 TLK2Q86UE8 772 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 ZNF677Q86XU0 584 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 ARFGAP1Q8N6T3 406 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 PRELID2Q8N945 189 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 ZNF564Q8TBZ8 553 aaPredicted RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 ZNF606Q8WXB4 792 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 ZNF653Q96CK0 615 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 FAM212AQ96EL1 285 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 JPH2Q9BR39 696 aaPredicted RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 SELENOOQ9BVL4 669 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 CELF4Q9BZC1 486 aaKnown RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 ELOVL4Q9GZR5 314 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 NIF3L1Q9GZT8 377 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 SMYD3Q9H7B4 428 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 LRRC4CQ9HCJ2 640 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 AVENQ9NQS1 362 aaPredicted RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 STIM2Q9P246 746 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 CTTNBP2NLQ9P2B4 639 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 CNOT8Q9UFF9 292 aaKnown RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 AMFRQ9UKV5 643 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 COLQQ9Y215 455 aaPredicted RBP4.03□□□□□ -1.76
CCDC110-202ENST00000393540 AKT3Q9Y243 479 aa4.03□□□□□ -1.76
CCDC110-202ENST00000393540 PGRMC1O00264 195 aaKnown RBP4.02□□□□□ -1.77
CCDC110-202ENST00000393540 FGGP02679 453 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 PFKMP08237 780 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 CYP2B6P20813 491 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 MMP8P22894 467 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 TBXAS1P24557 533 aaPredicted RBP4.02□□□□□ -1.77
CCDC110-202ENST00000393540 GNA15P30679 374 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 AARSP49588 968 aaKnown RBP eCLIP4.02□□□□□ -1.77
CCDC110-202ENST00000393540 PSEN2P49810 448 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 AP3M2P53677 418 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 TAS2R40P59535 323 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 PURAQ00577 322 aaKnown RBP4.02□□□□□ -1.77
CCDC110-202ENST00000393540 ORC1Q13415 861 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 MFSD10Q14728 455 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 IFI16Q16666 785 aaKnown RBP4.02□□□□□ -1.77
CCDC110-202ENST00000393540 SGSM1Q2NKQ1 1148 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 GLE1Q53GS7 698 aaKnown RBP4.02□□□□□ -1.77
CCDC110-202ENST00000393540 UBAP2Q5T6F2 1119 aaKnown RBP4.02□□□□□ -1.77
CCDC110-202ENST00000393540 SCARA5Q6ZMJ2 495 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 MMS22LQ6ZRQ5 1243 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 USP37Q86T82 979 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 DDX42Q86XP3 938 aaKnown RBP eCLIP4.02□□□□□ -1.77
CCDC110-202ENST00000393540 KLHL7Q8IXQ5 586 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 SYCE1Q8N0S2 351 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 KRT222Q8N1A0 295 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 SLC4A11Q8NBS3 891 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 ARRDC4Q8NCT1 418 aa4.02□□□□□ -1.77
CCDC110-202ENST00000393540 DDX27Q96GQ7 796 aaKnown RBP4.02□□□□□ -1.77
CCDC110-202ENST00000393540 RNPC3Q96LT9 517 aaKnown RBP4.02□□□□□ -1.77
CCDC110-202ENST00000393540 TCHPQ9BT92 498 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms