RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 CCND3P30281 292 aaPredicted RBP22.74■■□□□ 1.23
SPHK1-202ENST00000392496 MRPS6P82932 125 aaKnown RBP22.74■■□□□ 1.23
SPHK1-202ENST00000392496 C1QBPQ07021 282 aaKnown RBP22.74■■□□□ 1.23
SPHK1-202ENST00000392496 MESDQ14696 234 aa22.74■■□□□ 1.23
SPHK1-202ENST00000392496 ZBTB6Q15916 424 aa22.74■■□□□ 1.23
SPHK1-202ENST00000392496 PASD1Q8IV76 773 aa22.74■■□□□ 1.23
SPHK1-202ENST00000392496 HNRNPLLQ8WVV9 542 aaKnown RBP22.74■■□□□ 1.23
SPHK1-202ENST00000392496 TSPAN18Q96SJ8 248 aa22.74■■□□□ 1.23
SPHK1-202ENST00000392496 ZNF518BQ9C0D4 1074 aa22.74■■□□□ 1.23
SPHK1-202ENST00000392496 SDCBP2Q9H190 292 aa22.74■■□□□ 1.23
SPHK1-202ENST00000392496 CARD9Q9H257 536 aa22.74■■□□□ 1.23
SPHK1-202ENST00000392496 RBM12Q9NTZ6 932 aaKnown RBP22.74■■□□□ 1.23
SPHK1-202ENST00000392496 CNTN3Q9P232 1028 aa22.74■■□□□ 1.23
SPHK1-202ENST00000392496 TTC7AQ9ULT0 858 aaPredicted RBP22.74■■□□□ 1.23
SPHK1-202ENST00000392496 TRIP11Q15643 1979 aa22.74■■□□□ 1.23
SPHK1-202ENST00000392496 M0QZ92 97 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 PGRMC1O00264 195 aaKnown RBP22.73■■□□□ 1.23
SPHK1-202ENST00000392496 GUCY2FP51841 1108 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 ZNF394Q53GI3 561 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 UBXN11Q5T124 520 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 GDF6Q6KF10 455 aaPredicted RBP22.73■■□□□ 1.23
SPHK1-202ENST00000392496 CC2D1AQ6P1N0 951 aaPredicted RBP22.73■■□□□ 1.23
SPHK1-202ENST00000392496 SESTD1Q86VW0 696 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 TMEM130Q8N3G9 435 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 TTC39CQ8N584 583 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 CD99L2Q8TCZ2 262 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 RUBCNQ92622 972 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.73■■□□□ 1.238e-10■■■□□ 14.6
SPHK1-202ENST00000392496 WNT8AQ9H1J5 351 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 NXF3Q9H4D5 531 aaKnown RBP22.73■■□□□ 1.23
SPHK1-202ENST00000392496 ADAM22Q9P0K1 906 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 TMEM59LQ9UK28 342 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 TRPV2Q9Y5S1 764 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 PDCD11Q14690 1871 aaKnown RBP22.73■■□□□ 1.23
SPHK1-202ENST00000392496 ERLIN1O75477 346 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 RECQL4O94761 1208 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 ELNP15502 786 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 COMTP21964 271 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 RRM1P23921 792 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 BRD2P25440 801 aaKnown RBP22.73■■□□□ 1.23
SPHK1-202ENST00000392496 CDH5P33151 784 aaPredicted RBP22.73■■□□□ 1.23
SPHK1-202ENST00000392496 RAP1GAPP47736 663 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 PRMT2P55345 433 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 VSNL1P62760 191 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 GLE1Q53GS7 698 aaKnown RBP22.73■■□□□ 1.23
SPHK1-202ENST00000392496 RPAINQ86UA6 219 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 UBL4BQ8N7F7 174 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 TMEM35BQ8NCS4 154 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 BEST2Q8NFU1 509 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 ZSWIM1Q9BR11 485 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 SMYD3Q9H7B4 428 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 ARFGAP3Q9NP61 516 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 ZNF446Q9NWS9 450 aa22.73■■□□□ 1.23
SPHK1-202ENST00000392496 TMEM110-MUSTN1A8MSY1 372 aa22.72■■□□□ 1.23
SPHK1-202ENST00000392496 CILPO75339 1184 aa22.72■■□□□ 1.23
SPHK1-202ENST00000392496 ZRANB2O95218 330 aaKnown RBP eCLIP22.72■■□□□ 1.23
SPHK1-202ENST00000392496 CDH8P55286 799 aa22.72■■□□□ 1.23
SPHK1-202ENST00000392496 PTP4A2Q12974 167 aa22.72■■□□□ 1.23
SPHK1-202ENST00000392496 CCSAPQ6IQ19 270 aaPredicted RBP22.72■■□□□ 1.23
SPHK1-202ENST00000392496 FAM228AQ86W67 206 aa22.72■■□□□ 1.23
SPHK1-202ENST00000392496 ZMAT2Q96NC0 199 aaKnown RBP22.72■■□□□ 1.23
SPHK1-202ENST00000392496 C11orf70Q9BRQ4 267 aa22.72■■□□□ 1.23
SPHK1-202ENST00000392496 RNF216Q9NWF9 866 aaPredicted RBP22.72■■□□□ 1.23
SPHK1-202ENST00000392496 HES2Q9Y543 173 aa22.72■■□□□ 1.23
SPHK1-202ENST00000392496 MED7O43513 233 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 HMGCRP04035 888 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 ASGR1P07306 291 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 RAD23BP54727 409 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 TNNC1P63316 161 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 MYO1EQ12965 1108 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 KCNA10Q16322 511 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 MAP3K21Q5TCX8 1036 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 SERINC5Q86VE9 423 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 TFAP2BQ92481 460 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 CD101Q93033 1021 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 MRPL47Q9HD33 250 aaKnown RBP22.71■■□□□ 1.23
SPHK1-202ENST00000392496 NOC2LQ9Y3T9 749 aaKnown RBP22.71■■□□□ 1.23
SPHK1-202ENST00000392496 CDY2AQ9Y6F7 541 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 SCINQ9Y6U3 715 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 MMP8P22894 467 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 CTNNA2P26232 953 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 SSTR3P32745 418 aaPredicted RBP22.71■■□□□ 1.23
SPHK1-202ENST00000392496 CLUL1Q15846 466 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 XKR4Q5GH76 650 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 FAM47CQ5HY64 1035 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 PLEKHA7Q6IQ23 1121 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 PCSK9Q8NBP7 692 aaKnown RBP22.71■■□□□ 1.23
SPHK1-202ENST00000392496 WHAMMQ8TF30 809 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 LRRC1Q9BTT6 524 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 CXCL16Q9H2A7 254 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 ANAPC7Q9UJX3 599 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 UBQLN1Q9UMX0 589 aaKnown RBP22.71■■□□□ 1.23
SPHK1-202ENST00000392496 CEP83Q9Y592 693 aa22.71■■□□□ 1.23
SPHK1-202ENST00000392496 ATP8B1O43520 1251 aa22.7■■□□□ 1.22
SPHK1-202ENST00000392496 RRP9O43818 475 aaKnown RBP22.7■■□□□ 1.22
SPHK1-202ENST00000392496 CALB1P05937 261 aa22.7■■□□□ 1.22
SPHK1-202ENST00000392496 RNASE9P60153 205 aaKnown RBP22.7■■□□□ 1.22
SPHK1-202ENST00000392496 INCA1Q0VD86 236 aa22.7■■□□□ 1.22
SPHK1-202ENST00000392496 DCAF12L1Q5VU92 463 aa22.7■■□□□ 1.22
SPHK1-202ENST00000392496 MMS22LQ6ZRQ5 1243 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms