RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 GBA2Q9HCG7 927 aaPredicted RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 AGO2Q9UKV8 859 aaKnown RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 SMG5Q9UPR3 1016 aaKnown RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 STXBP5LQ9Y2K9 1186 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 TRIM17Q9Y577 477 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 SRRM3A6NNA2 597 aaPredicted RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 SPECC1L-ADORA2AF8WAN1 911 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 O00370 1275 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 NVLO15381 856 aaKnown RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 TRPA1O75762 1119 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 HLA-DRAP01903 254 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 ZSCAN5DPP0CG00 497 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 PPATQ06203 517 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 OR6B2Q6IFH4 312 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 ATP11CQ8NB49 1132 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 RBBP8NLQ8NC74 664 aaPredicted RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 ATXN2LQ8WWM7 1075 aaKnown RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 PCDHB18PQ96TA0 734 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 TUBB6Q9BUF5 446 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 LRRC4CQ9HCJ2 640 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 SUGT1Q9Y2Z0 365 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 ALDH1A1P00352 501 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 NCALDP61601 193 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 NFX1Q12986 1120 aaKnown RBP11.99□□□□□ -0.49
SMAD9-202ENST00000379826 PODNQ7Z5L7 613 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 PCGF5Q86SE9 256 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 THNSL1Q8IYQ7 743 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 TMEM121Q9BTD3 319 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 MANSC1Q9H8J5 431 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 DLGAP2Q9P1A6 1054 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 PCYOX1Q9UHG3 505 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 RPTORQ8N122 1335 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 PGM1P36871 562 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 PKN2Q16513 984 aaKnown RBP11.99□□□□□ -0.49
SMAD9-202ENST00000379826 MAP1SQ66K74 1059 aaPredicted RBP11.99□□□□□ -0.49
SMAD9-202ENST00000379826 RSPH3Q86UC2 560 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 HTATIP2Q9BUP3 242 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 VCX3BQ9H321 246 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 SLC9A2Q9UBY0 812 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 LLGL2Q6P1M3 1020 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 NLRP9Q7RTR0 991 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 HEXIM2Q96MH2 286 aaKnown RBP11.99□□□□□ -0.49
SMAD9-202ENST00000379826 CRAMP1Q96RY5 1269 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 WRNIP1Q96S55 665 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 ADPGKQ9BRR6 497 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 SLC12A6Q9UHW9 1150 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 P4HA2O15460 535 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 CREB1P16220 341 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 BRD2P25440 801 aaKnown RBP11.99□□□□□ -0.49
SMAD9-202ENST00000379826 YWHAEP62258 255 aaKnown RBP11.99□□□□□ -0.49
SMAD9-202ENST00000379826 RCN1Q15293 331 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 SPDYCQ5MJ68 293 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 CERS5Q8N5B7 392 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 ANKRD36BP1Q96IX9 119 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 ELP3Q9H9T3 547 aa11.99□□□□□ -0.49
SMAD9-202ENST00000379826 BCL9LQ86UU0 1499 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 CYP3A7-CYP3A51PA0A087WV96 503 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 H0YGN5 161 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 CALB1P05937 261 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 CYP3A7P24462 503 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 RPA3P35244 121 aaPredicted RBP11.98□□□□□ -0.49
SMAD9-202ENST00000379826 PSMD6Q15008 389 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 ZSWIM2Q8NEG5 633 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 ATP2A3Q93084 1043 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 NAF1Q96HR8 494 aaKnown RBP11.98□□□□□ -0.49
SMAD9-202ENST00000379826 CYP4F11Q9HBI6 524 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 TMEM59LQ9UK28 342 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 NFS1Q9Y697 457 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 E2F8A0AVK6 867 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 ADRB2P07550 413 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 EPHB1P54762 984 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 PDE1BQ01064 536 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 KCNT1Q5JUK3 1230 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 EPS8L1Q8TE68 723 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 TLCD1Q96CP7 247 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 TAAR1Q96RJ0 339 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 SNED1Q8TER0 1413 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 PKD1L3Q7Z443 1732 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 GEMIN4P57678 1058 aaKnown RBP11.98□□□□□ -0.49
SMAD9-202ENST00000379826 PSMC1P62191 440 aaKnown RBP11.98□□□□□ -0.49
SMAD9-202ENST00000379826 PTK7Q13308 1070 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 LACTB2Q53H82 288 aaPredicted RBP11.98□□□□□ -0.49
SMAD9-202ENST00000379826 CRLF3Q8IUI8 442 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 ZBTB8OSQ8IWT0 167 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 FGD4Q96M96 766 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 HEY2Q9UBP5 337 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 TTLL3Q9Y4R7 772 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 FRMPD4Q14CM0 1322 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 YARSP54577 528 aaKnown RBP11.98□□□□□ -0.49
SMAD9-202ENST00000379826 ORC1Q13415 861 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 THOC5Q13769 683 aaKnown RBP11.98□□□□□ -0.49
SMAD9-202ENST00000379826 ATG16L1Q676U5 607 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 AGAP1Q9UPQ3 857 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 ECM29Q5VYK3 1845 aa11.98□□□□□ -0.49
SMAD9-202ENST00000379826 INO80B-WBP1J3KQ70 363 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 GZMAP12544 262 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 KCNA3P22001 575 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 GTF2H1P32780 548 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 PSMC4P43686 418 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 CLK2P49760 499 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms