RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 SCOCQ9UIL1 159 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 LRCH1Q9Y2L9 728 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 PTPRFP10586 1907 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 DNAH12Q6ZR08 3092 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 VHLP40337 213 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 HADHBP55084 474 aaKnown RBP13.69□□□□□ -0.22
MSH5-204ENST00000375755 GHRHRQ02643 423 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 C9orf131Q5VYM1 1079 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 C1orf54Q8WWF1 131 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 NACC1Q96RE7 527 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 RIT2Q99578 217 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 LBHD1Q9BQE6 289 aaPredicted RBP13.69□□□□□ -0.22
MSH5-204ENST00000375755 ELP3Q9H9T3 547 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 WHRNQ9P202 907 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 MTUS1Q9ULD2 1270 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 FRMPD4Q14CM0 1322 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 MROH7Q68CQ1 1323 aa13.69□□□□□ -0.22
MSH5-204ENST00000375755 BRCA2P51587 3418 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 THAP12O43422 761 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 TCEA3O75764 348 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 CNTN2Q02246 1040 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 RPUSD2Q8IZ73 545 aaKnown RBP13.68□□□□□ -0.22
MSH5-204ENST00000375755 TRAPPC9Q96Q05 1148 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 PPP1R12CQ9BZL4 782 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 ASIC3Q9UHC3 531 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 ADAMTS5Q9UNA0 930 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 WDR81Q562E7 1941 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 SLC26A4O43511 780 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 LRRN2O75325 713 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 SPAG7O75391 227 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 FTLP02792 175 aaPredicted RBP13.68□□□□□ -0.22
MSH5-204ENST00000375755 DLATP10515 647 aaKnown RBP13.68□□□□□ -0.22
MSH5-204ENST00000375755 RPL13P26373 211 aaKnown RBP13.68□□□□□ -0.22
MSH5-204ENST00000375755 SNX30Q5VWJ9 437 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 PADI6Q6TGC4 694 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 ZSWIM2Q8NEG5 633 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 FAM210AQ96ND0 272 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 MIPEPQ99797 713 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 GINM1Q9NU53 330 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 STOML1Q9UBI4 398 aa13.68□□□□□ -0.22
MSH5-204ENST00000375755 TRAFD1O14545 582 aaPredicted RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 MAGEB2O15479 319 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 DCTN3O75935 186 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 ASMTLO95671 621 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 NR3C2P08235 984 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 BCRP11274 1271 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 FMO5P49326 533 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 CACNA2D1P54289 1103 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 USP4Q13107 963 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 TRIP13Q15645 432 aaPredicted RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 CBWD6Q4V339 395 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 CBWD3Q5JTY5 395 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 CBWD5Q5RIA9 395 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 DSTYKQ6XUX3 929 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 C4orf50Q6ZRC1 276 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 C10orf82Q8WW14 230 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 SCG3Q8WXD2 468 aaKnown RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 CD101Q93033 1021 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 BICD1Q96G01 975 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 OTUD5Q96G74 571 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 RBM41Q96IZ5 413 aaKnown RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 C12orf42Q96LP6 360 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 AGPAT1Q99943 283 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 TLE6Q9H808 572 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 PARVGQ9HBI0 331 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 METTL5Q9NRN9 209 aaKnown RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 ARHGEF35A5YM69 484 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 FAM47DPA6NHR8 397 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 ATMINO43313 823 aaPredicted RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 POTEJP0CG39 1038 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 IVDP26440 423 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 MARK3P27448 753 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 PTPN4P29074 926 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 RANBP1P43487 201 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 ITGA8P53708 1063 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 CCDC6Q16204 474 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 SUPT20HL1Q3ZLR7 823 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 TAF1BQ53T94 588 aaPredicted RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 ODR4Q5SWX8 454 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 CCNJLQ8IV13 435 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 FAM186BQ8IYM0 893 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 C12orf50Q8NA57 414 aaPredicted RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 BTBD6Q96KE9 485 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 ADARB2Q9NS39 739 aaKnown RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 BTBD7Q9P203 1132 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 GRID1Q9ULK0 1009 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 PAPPA2Q9BXP8 1791 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 RASA4BC9J798 803 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 FOXN3O00409 490 aaPredicted RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 RASA4O43374 803 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 CDH16O75309 829 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 LMNAP02545 664 aaKnown RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 LMNB2Q03252 620 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 RCN1Q15293 331 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 ZNF746Q6NUN9 644 aaPredicted RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 ZC3H18Q86VM9 953 aaKnown RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 ZNF513Q8N8E2 541 aaPredicted RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 INTS2Q9H0H0 1204 aaKnown RBP13.67□□□□□ -0.22
MSH5-204ENST00000375755 LRRC19Q9H756 370 aa13.67□□□□□ -0.22
MSH5-204ENST00000375755 NUMBLQ9Y6R0 609 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms