RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 XPO7Q9UIA9 1087 aaKnown RBP10.65□□□□□ -0.7
PTCH1-204ENST00000375290 PDE9AO76083 593 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 RAD23AP54725 363 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 MTF1Q14872 753 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 MEA1Q16626 185 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 CHAMP1Q96JM3 812 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 DCP1AQ9NPI6 582 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-204ENST00000375290 ALG6Q9Y672 507 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 ZNF197O14709 1029 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 IL18RAPO95256 599 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 TMEM245Q9H330 911 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 SLC4A7Q9Y6M7 1214 aa10.65□□□□□ -0.7
PTCH1-204ENST00000375290 XRCC4Q13426 336 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 TRIP13Q15645 432 aaPredicted RBP10.65□□□□□ -0.71
PTCH1-204ENST00000375290 TRAF7Q6Q0C0 670 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 KRT73Q86Y46 540 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 GSPT2Q8IYD1 628 aaKnown RBP10.65□□□□□ -0.71
PTCH1-204ENST00000375290 SH2D3CQ8N5H7 860 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 MBD2Q9UBB5 411 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 INO80B-WBP1J3KQ70 363 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 DNAJC6O75061 913 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 ALAS1P13196 640 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 RPA1P27694 616 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 ITGA1P56199 1179 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 FMR1Q06787 632 aaKnown RBP eCLIP10.65□□□□□ -0.712e-7■■■■■ 26.8
PTCH1-204ENST00000375290 IMPG1Q17R60 797 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 RNF43Q68DV7 783 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 CCDC90BQ9GZT6 254 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 TFCP2L1Q9NZI6 479 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 PCDHGC5Q9Y5F6 944 aa10.65□□□□□ -0.71
PTCH1-204ENST00000375290 STX7O15400 261 aaKnown RBP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 ST13P50502 369 aaKnown RBP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 P3H2Q8IVL5 708 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 CHP1Q99653 195 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 DDX50Q9BQ39 737 aaKnown RBP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 FANCEQ9HB96 536 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 TBX2Q13207 712 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 UGT3A1Q6NUS8 523 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 ELMSAN1Q6PJG2 1045 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 NET1Q7Z628 596 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 RFWD2Q8NHY2 731 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 KRCC1Q9NPI7 259 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 CYP39A1Q9NYL5 469 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 PCDHB8Q9UN66 801 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 PCDHA6Q9UN73 950 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 PCDHA8Q9Y5H6 950 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 EIF3EP60228 445 aaKnown RBP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 COBLL1Q53SF7 1204 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 SLC26A11Q86WA9 606 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 ANKRD26Q9UPS8 1709 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 GOLGA8RI6L899 631 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 SNAPC5O75971 98 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 S100A1P23297 94 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 OLFML2BQ68BL8 750 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 KCNK10P57789 538 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 C3orf62Q6ZUJ4 267 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 B4GALNT2Q8NHY0 566 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 RIT2Q99578 217 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 FAM32AQ9Y421 112 aaKnown RBP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 EMSYQ7Z589 1322 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 UNC5CO95185 931 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 MED26O95402 600 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 KLHDC7AQ5VTJ3 777 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 SLC22A9Q8IVM8 553 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 NCKIPSDQ9NZQ3 722 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 HUS1O60921 280 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 KYAT3Q6YP21 454 aaKnown RBP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 TMC3Q7Z5M5 1100 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 RGL2O15211 777 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 SF3A3Q12874 501 aaKnown RBP eCLIP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 GRAPQ13588 217 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 LONRF1Q17RB8 773 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 BNC2Q6ZN30 1099 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 ERO1BQ86YB8 467 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 GRAPLQ8TC17 118 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 ULK4Q96C45 1275 aa10.64□□□□□ -0.71
PTCH1-204ENST00000375290 UBE2OQ9C0C9 1292 aaKnown RBP10.64□□□□□ -0.71
PTCH1-204ENST00000375290 TRIM24O15164 1050 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 PLEKHA8P1O95397 391 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 GTF2IP78347 998 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 AAGABQ6PD74 315 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 LRRC74BQ6ZQY2 392 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 IKBIPQ70UQ0 350 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 HIPK4Q8NE63 616 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 C11orf70Q9BRQ4 267 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 CYP4F11Q9HBI6 524 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 UTP6Q9NYH9 597 aaKnown RBP10.63□□□□□ -0.71
PTCH1-204ENST00000375290 DIP2AQ14689 1571 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 KIF28PB7ZC32 967 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 PRR23D1E9PI22 279 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-204ENST00000375290 PRR23D2P0DMB1 279 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-204ENST00000375290 CYP2C9P11712 490 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 MAPK1P28482 360 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 GPC3P51654 580 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 ACAP1Q15027 740 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 LRRC14Q15048 493 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 THEM5Q8N1Q8 247 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 TRPC7Q9HCX4 862 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 NMRK1Q9NWW6 199 aa10.63□□□□□ -0.71
PTCH1-204ENST00000375290 POTEMA6NI47 508 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms