RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 HDAC7Q8WUI4 952 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 EEF2KMTQ96G04 330 aa22.61■■□□□ 1.21
MAP1LC3A-202ENST00000374837 PSMA7O14818 248 aa22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 CETN3O15182 167 aa22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 CST3P01034 146 aaPredicted RBP22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 CYP11A1P05108 521 aa22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 HOXD11P31277 338 aaPredicted RBP22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 BFSP1Q12934 665 aa22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 KLHL10Q6JEL2 608 aa22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 ZC3H3Q8IXZ2 948 aaKnown RBP22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 FAM186BQ8IYM0 893 aa22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 NUP62CLQ9H1M0 184 aa22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 ADAM7Q9H2U9 754 aa22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 PLEKHA4Q9H4M7 779 aa22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 DPP7Q9UHL4 492 aa22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 R3HCC1Q9Y3T6 440 aaKnown RBP22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 USP15Q9Y4E8 981 aaPredicted RBP22.6■■□□□ 1.21
MAP1LC3A-202ENST00000374837 BRWD1Q9NSI6 2320 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 ARHGEF37A1IGU5 675 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 C4BPAP04003 597 aaKnown RBP22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 VAMP7P51809 220 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 AP3M2P53677 418 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 ARPP19P56211 112 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 FKBP3Q00688 224 aaKnown RBP22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 ROR1Q01973 937 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 LRRC63Q05C16 580 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 SMAD2Q15796 467 aaKnown RBP22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 C1orf220Q5T0J3 134 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 WSCD1Q658N2 575 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 OVOS1Q6IE37 1185 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 FEZF2Q8TBJ5 459 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 SUSD6Q92537 303 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 HPDLQ96IR7 371 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 SFXN1Q9H9B4 322 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 FBXW11Q9UKB1 542 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 DSEQ9UL01 958 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 FAM50BQ9Y247 325 aa22.59■■□□□ 1.21
MAP1LC3A-202ENST00000374837 SPDYE4A6NLX3 237 aa22.58■■□□□ 1.21
MAP1LC3A-202ENST00000374837 ITIH3Q06033 890 aa22.58■■□□□ 1.21
MAP1LC3A-202ENST00000374837 MYO1EQ12965 1108 aa22.58■■□□□ 1.21
MAP1LC3A-202ENST00000374837 ELMSAN1Q6PJG2 1045 aa22.58■■□□□ 1.21
MAP1LC3A-202ENST00000374837 TMC5Q6UXY8 1006 aa22.58■■□□□ 1.21
MAP1LC3A-202ENST00000374837 INTS8Q75QN2 995 aaKnown RBP22.58■■□□□ 1.21
MAP1LC3A-202ENST00000374837 METTL23Q86XA0 190 aa22.58■■□□□ 1.21
MAP1LC3A-202ENST00000374837 NELFBQ8WX92 580 aa22.58■■□□□ 1.21
MAP1LC3A-202ENST00000374837 MKNK1Q9BUB5 465 aa22.58■■□□□ 1.21
MAP1LC3A-202ENST00000374837 GDAP2Q9NXN4 497 aa22.58■■□□□ 1.21
MAP1LC3A-202ENST00000374837 CDH22Q9UJ99 828 aa22.58■■□□□ 1.21
MAP1LC3A-202ENST00000374837 SNX9Q9Y5X1 595 aa22.58■■□□□ 1.21
MAP1LC3A-202ENST00000374837 VWA8A3KMH1 1905 aa22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 WDR27A2RRH5 827 aa22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 IKBKBO14920 756 aa22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 PHACTR2O75167 634 aa22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 RFPL2O75678 378 aa22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ABLIM3O94929 683 aa22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 WEE2P0C1S8 567 aa22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 KRT13P13646 458 aa22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 MCCD1P59942 119 aaPredicted RBP22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 TRPC3Q13507 836 aa22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 TDRD10Q5VZ19 366 aaKnown RBP22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 CES5AQ6NT32 575 aa22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 CMASQ8NFW8 434 aaPredicted RBP22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ZNF461Q8TAF7 563 aa22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 DUSP9Q99956 384 aaKnown RBP22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 OXCT2Q9BYC2 517 aaPredicted RBP22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 CTNND2Q9UQB3 1225 aa22.57■■□□□ 1.2
MAP1LC3A-202ENST00000374837 OR6C75A6NL08 312 aa22.56■■□□□ 1.2
MAP1LC3A-202ENST00000374837 HUS1O60921 280 aa22.56■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ZMYND10O75800 440 aa22.56■■□□□ 1.2
MAP1LC3A-202ENST00000374837 EPB41P11171 864 aaKnown RBP22.56■■□□□ 1.2
MAP1LC3A-202ENST00000374837 STX17P56962 302 aa22.56■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ENPEPQ07075 957 aa22.56■■□□□ 1.2
MAP1LC3A-202ENST00000374837 BIRC3Q13489 604 aa22.56■■□□□ 1.2
MAP1LC3A-202ENST00000374837 TTI2Q6NXR4 508 aa22.56■■□□□ 1.2
MAP1LC3A-202ENST00000374837 GPR149Q86SP6 731 aa22.56■■□□□ 1.2
MAP1LC3A-202ENST00000374837 PDCL2Q8N4E4 241 aa22.56■■□□□ 1.2
MAP1LC3A-202ENST00000374837 RTP3Q9BQQ7 232 aa22.56■■□□□ 1.2
MAP1LC3A-202ENST00000374837 L1RE1Q9UN81 338 aa22.56■■□□□ 1.2
MAP1LC3A-202ENST00000374837 CCDC195A0A1B0GUA6 201 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 VNN1O95497 513 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 OR4Q2P0C623 313 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 TRIM49P0CI25 452 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 TRIM49CP0CI26 452 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 MYL6P60660 151 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ZACNQ401N2 412 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ATAT1Q5SQI0 421 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 TPGS2Q68CL5 300 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 FOXR2Q6PJQ5 311 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 SV2AQ7L0J3 742 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 TOP6BLQ8N6T0 577 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 TMEM209Q96SK2 561 aa22.55■■□□□ 1.2
MAP1LC3A-202ENST00000374837 BICDL2A1A5D9 508 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 SLC16A3O15427 465 aaKnown RBP22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 PAPLNO95428 1278 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 C8AP07357 584 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 CPB1P15086 417 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ATF2P15336 505 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 ATICP31939 592 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 PPP3CAQ08209 521 aa22.54■■□□□ 1.2
MAP1LC3A-202ENST00000374837 PAK1Q13153 545 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms