RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 PABPC3Q9H361 631 aaKnown RBP12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 SMARCAD1Q9H4L7 1026 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 C17orf75Q9HAS0 396 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 TMBIM4Q9HC24 238 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 CST3P01034 146 aaPredicted RBP12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 ACTN3Q08043 901 aaPredicted RBP12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 BYSLQ13895 437 aaKnown RBP12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 CAPSQ13938 189 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 LRRC8CQ8TDW0 803 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 SCFD2Q8WU76 684 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 FAF2Q96CS3 445 aa12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 CDC42EP4Q9H3Q1 356 aaKnown RBP12.48□□□□□ -0.41
PACSIN1-202ENST00000374043 INHBAP08476 426 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 CFHP08603 1231 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 KCNA2P16389 499 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 GBP1P32455 592 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 AARSP49588 968 aaKnown RBP eCLIP12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 IER5Q5VY09 327 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 EEF1DP3Q658K8 133 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 CROCCP2Q86T23 111 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 RDM1Q8NG50 284 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 RAPGEF5Q92565 580 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 DHX35Q9H5Z1 703 aaKnown RBP12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 DMAC2Q9NW81 257 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 DCTN4Q9UJW0 460 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 HES2Q9Y543 173 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 ZBED1O96006 694 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 CYP2B6P20813 491 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 MSH2P43246 934 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 LMNB2Q03252 620 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 PDIK1LQ8N165 341 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 MYCBPAPQ8TBZ2 947 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 CHMP6Q96FZ7 201 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 ACAP3Q96P50 834 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 C2orf40Q9H1Z8 148 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 BTBD7Q9P203 1132 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 ZNF214Q9UL59 606 aaPredicted RBP12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 PIN4Q9Y237 131 aaKnown RBP12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 INPP5FQ9Y2H2 1132 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 NEU2Q9Y3R4 380 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 TMEM120BA0PK00 339 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 CCDC78A2IDD5 438 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 NPTXRO95502 500 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 HSPA9P38646 679 aaKnown RBP12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 MAGEA9P43362 315 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 ITIH3Q06033 890 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 CHD4Q14839 1912 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 XIRP1Q702N8 1843 aaKnown RBP12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 CENPUQ71F23 418 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 SLC9A9Q8IVB4 645 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 TIAM2Q8IVF5 1701 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 FAM71DQ8N9W8 422 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 CFAP57Q96MR6 1250 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 SPON1Q9HCB6 807 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 FGFR1OP2Q9NVK5 253 aa12.47□□□□□ -0.41
PACSIN1-202ENST00000374043 ANKRD36CQ5JPF3 1778 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 CCL15-CCL14A0A0B4J2E2 113 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 ALDH3A1P30838 453 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 PLCB4Q15147 1175 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 CCL15Q16663 113 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 METTL7BQ6UX53 244 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 MFSD7Q6UXD7 560 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 ACOT1Q86TX2 421 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 MAP7D3Q8IWC1 876 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 ABRAQ8N0Z2 381 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 BBOF1Q8ND07 529 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 OR6J1Q8NGC5 347 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 TTC17Q96AE7 1141 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 HPDLQ96IR7 371 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 BTAF1O14981 1849 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 CREB3O43889 395 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 ADCY3O60266 1144 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 CA8P35219 290 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 EIF3EP60228 445 aaKnown RBP12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 SURF1Q15526 300 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 P3H4Q92791 437 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 CDCA5Q96FF9 252 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 XPO6Q96QU8 1125 aaKnown RBP12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 RPS6KC1Q96S38 1066 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 CGRRF1Q99675 332 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 PORCNQ9H237 461 aa12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 CNOT10Q9H9A5 744 aaKnown RBP12.46□□□□□ -0.41
PACSIN1-202ENST00000374043 E2F8A0AVK6 867 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 O00370 1275 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 STAG3L1P0CL83 205 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 RFC5P40937 340 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 NCKAP1LP55160 1127 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 NME3Q13232 169 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 MYBPC2Q14324 1141 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 TMEM132DQ14C87 1099 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 ERO1BQ86YB8 467 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 PPM1NQ8N819 430 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 HELQQ8TDG4 1101 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 SETD4Q9NVD3 440 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 ERAP1Q9NZ08 941 aa12.46□□□□□ -0.42
PACSIN1-202ENST00000374043 SUN1O94901 812 aa12.45□□□□□ -0.42
PACSIN1-202ENST00000374043 PROSCO94903 275 aa12.45□□□□□ -0.42
PACSIN1-202ENST00000374043 RPSAP08865 295 aaKnown RBP12.45□□□□□ -0.42
PACSIN1-202ENST00000374043 MYBL1P10243 752 aa12.45□□□□□ -0.42
PACSIN1-202ENST00000374043 PHBP35232 272 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms