RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 DEPDC1Q5TB30 811 aa6.87□□□□□ -1.31
VPS13B-202ENST00000357162 UCHL3P15374 230 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 CNDP1Q96KN2 507 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 MED15Q96RN5 788 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 MOV10Q9HCE1 1003 aaKnown RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 CPSF3Q9UKF6 684 aaKnown RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 MROH2AA6NES4 1674 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 CCND2P30279 289 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 VAMP7P51809 220 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 CERKLQ49MI3 558 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 DPH6Q7L8W6 267 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 AMER2Q8N7J2 671 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 USP33Q8TEY7 942 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 STARD8Q92502 1023 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 SH3GLB1Q9Y371 365 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 LRRN2O75325 713 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 TALDO1P37837 337 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 KRT17Q04695 432 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 TRIP13Q15645 432 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 TBC1D19Q8N5T2 526 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 KCNF1Q9H3M0 494 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 TMBIM4Q9HC24 238 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 SLC24A3Q9HC58 644 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 DCTN4Q9UJW0 460 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 STX11O75558 287 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 CFBP00751 764 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 METP08581 1390 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 SLC7A5Q01650 507 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 SLC34A1Q06495 639 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 MARK2Q7KZI7 788 aaKnown RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 MAGEB10Q96LZ2 347 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 CLEC4MQ9H2X3 399 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ANKHQ9HCJ1 492 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 INO80Q9ULG1 1556 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 TARBP1Q13395 1621 aaKnown RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF18P17022 549 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 NR2C2P49116 596 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 CHRNB3Q05901 458 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF699Q32M78 642 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 EAPPQ56P03 285 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 B3GNT6Q6ZMB0 384 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 PLEKHM3Q6ZWE6 761 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 CCDC103Q8IW40 242 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 EXD1Q8NHP7 514 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 SMYD3Q9H7B4 428 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 SYNPO2Q9UMS6 1093 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 TBC1D12O60347 775 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ADRA2BP18089 450 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ACADSBP45954 432 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 CCT8P50990 548 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 MSLNQ13421 630 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 RC3H1Q5TC82 1133 aaKnown RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 CDKAL1Q5VV42 579 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ARHGEF26Q96DR7 871 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 PTPRUQ92729 1446 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 LRRIQ4A6NIV6 560 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 IL18RAPO95256 599 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 MYL2P10916 166 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 RCN1Q15293 331 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 RABL6Q3YEC7 729 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 KRT74Q7RTS7 529 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 SHCBP1Q8NEM2 672 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 TTLL11Q8NHH1 800 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 VPS11Q9H270 941 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 EFCAB1Q9HAE3 211 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 LRRC4Q9HBW1 653 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ZCCHC17Q9NP64 241 aaKnown RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 KIAA1257Q9ULG3 409 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF608Q9ULD9 1512 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 MROH7Q68CQ1 1323 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 KRT87PA6NCN2 255 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 KRT19P08727 400 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 STAT5AP42229 794 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 STAT5BP51692 787 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 YWHAHQ04917 246 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ABCB5Q2M3G0 1257 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ARMC3Q5W041 872 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 OSBPL11Q9BXB4 747 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 DDX47Q9H0S4 455 aaKnown RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 PNPLA3Q9NST1 481 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 DDX20Q9UHI6 824 aaKnown RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ZBBXA8MT70 800 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 DGAT1O75907 488 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ASNSP08243 561 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ERO1BQ86YB8 467 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 SLC26A7Q8TE54 656 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 E2F7Q96AV8 911 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 VPS33AQ96AX1 596 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 PHF11Q9UIL8 331 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ZNF804BA4D1E1 1349 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 VIL1P09327 827 aaKnown RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 CSNK2BP67870 215 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 SPATS1Q496A3 300 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 AP3S1Q92572 193 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 MRRFQ96E11 262 aaKnown RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 SLC10A4Q96EP9 437 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 MMS19Q96T76 1030 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 NRXN1Q9ULB1 1477 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 ADGRB3O60242 1522 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 C3orf70A6NLC5 250 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms