RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 RASGEF1CQ8N431 466 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
TRAK1-202ENST00000341421 LNX1Q8TBB1 728 aaPredicted RBP12.36□□□□□ -0.43
TRAK1-202ENST00000341421 PRCCQ92733 491 aaPredicted RBP12.36□□□□□ -0.43
TRAK1-202ENST00000341421 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.36□□□□□ -0.43
TRAK1-202ENST00000341421 PHKA2P46019 1235 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 STAT5BP51692 787 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 OSTNP61366 133 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 IGBP1P78318 339 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 CLEC16AQ2KHT3 1053 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 ATG16L1Q676U5 607 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 PDCD2LQ9BRP1 358 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 NEU2Q9Y3R4 380 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 BAZ2AQ9UIF9 1905 aaKnown RBP12.36□□□□□ -0.43
TRAK1-202ENST00000341421 KCNA3P22001 575 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 MAGEA4P43358 317 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 CCNA1P78396 465 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 IRX4P78413 519 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 CUL2Q13617 745 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 MXD4Q14582 209 aaPredicted RBP12.36□□□□□ -0.43
TRAK1-202ENST00000341421 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 SV2AQ7L0J3 742 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 TAS1R2Q8TE23 839 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 ALKBH8Q96BT7 664 aaKnown RBP12.36□□□□□ -0.43
TRAK1-202ENST00000341421 ARHGEF26Q96DR7 871 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 FGFBP2Q9BYJ0 223 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 TRABDQ9H4I3 376 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 AVENQ9NQS1 362 aaPredicted RBP12.36□□□□□ -0.43
TRAK1-202ENST00000341421 BCAP29Q9UHQ4 241 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 SLC12A6Q9UHW9 1150 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 ANGPTL2Q9UKU9 493 aa12.36□□□□□ -0.43
TRAK1-202ENST00000341421 C4AP0C0L4 1744 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 C4BP0C0L5 1744 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 E7ENQ6 273 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 NFIBO00712 420 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 HNRNPCL1O60812 293 aaKnown RBP12.35□□□□□ -0.43
TRAK1-202ENST00000341421 PAEPP09466 180 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 RALAP11233 206 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 OSBPP22059 807 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 RPS6KA3P51812 740 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 EMC10Q5UCC4 262 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 SLC47A2Q86VL8 602 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 ARHGEF19Q8IW93 802 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 ST13P4Q8IZP2 240 aaPredicted RBP12.35□□□□□ -0.43
TRAK1-202ENST00000341421 C9orf72Q96LT7 481 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 WDR18Q9BV38 432 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 RXFP1Q9HBX9 757 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 PLA2G6O60733 806 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 PPFIA2O75334 1257 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 PROSCO94903 275 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 RPS12P25398 132 aaKnown RBP12.35□□□□□ -0.43
TRAK1-202ENST00000341421 HMGCS2P54868 508 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 MAP3K21Q5TCX8 1036 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 C12orf56Q8IXR9 622 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 HACE1Q8IYU2 909 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 RBM46Q8TBY0 533 aaKnown RBP12.35□□□□□ -0.43
TRAK1-202ENST00000341421 SALL4Q9UJQ4 1053 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 KRT3P12035 628 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 ARL4AP40617 200 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 KYAT1Q16773 422 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 HSPH1Q92598 858 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 TMEM143Q96AN5 459 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 FAF2Q96CS3 445 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 PI4K2AQ9BTU6 479 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 MYOZ2Q9NPC6 264 aa12.35□□□□□ -0.43
TRAK1-202ENST00000341421 KRT38O76015 456 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 BAG2O95816 211 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 CCNG2Q16589 344 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 MAP4K3Q8IVH8 894 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 CFAP61Q8NHU2 1237 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 KIFC3Q9BVG8 833 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 KIAA1683Q9H0B3 1180 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 CDC42EP4Q9H3Q1 356 aaKnown RBP12.34□□□□□ -0.43
TRAK1-202ENST00000341421 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRAK1-202ENST00000341421 CHORDC1Q9UHD1 332 aaPredicted RBP12.34□□□□□ -0.43
TRAK1-202ENST00000341421 PCYOX1Q9UHG3 505 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 SMNDC1O75940 238 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRAK1-202ENST00000341421 FESP07332 822 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 MARK3P27448 753 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 GTF2BQ00403 316 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 MCL1Q07820 350 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 ZNF268Q14587 947 aaPredicted RBP12.34□□□□□ -0.43
TRAK1-202ENST00000341421 CWF19L1Q69YN2 538 aaKnown RBP12.34□□□□□ -0.43
TRAK1-202ENST00000341421 EEPD1Q7L9B9 569 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 AFAP1L2Q8N4X5 818 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 EXD1Q8NHP7 514 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 ERP27Q96DN0 273 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 ATG4CQ96DT6 458 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 VCPIP1Q96JH7 1222 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 FRMD8P1Q9BZ68 369 aaPredicted RBP12.34□□□□□ -0.43
TRAK1-202ENST00000341421 NIF3L1Q9GZT8 377 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 UBN1Q9NPG3 1134 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 PXMP2Q9NR77 195 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 PSMC3IPQ9P2W1 217 aaPredicted RBP12.34□□□□□ -0.43
TRAK1-202ENST00000341421 COPEO14579 308 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 SNX3O60493 162 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 PRKCBP05771 671 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 NAMPTP43490 491 aa12.34□□□□□ -0.43
TRAK1-202ENST00000341421 SERPINB4P48594 390 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms