RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SPDYE4A6NLX3 237 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 OAZ2O95190 189 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 C1RP00736 705 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 CYP11A1P05108 521 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 TYMPP19971 482 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 VAMP7P51809 220 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 ARPP19P56211 112 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 FKBP3Q00688 224 aaKnown RBP16.42■□□□□ 0.22
UBE3B-201ENST00000340074 ROR1Q01973 937 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 RARS2Q5T160 578 aaKnown RBP16.42■□□□□ 0.22
UBE3B-201ENST00000340074 OVOS1Q6IE37 1185 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 SLC8B1Q6J4K2 584 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 INTS8Q75QN2 995 aaKnown RBP16.42■□□□□ 0.22
UBE3B-201ENST00000340074 FEZF2Q8TBJ5 459 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 NELFBQ8WX92 580 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 HPDLQ96IR7 371 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 CDH22Q9UJ99 828 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 CTNND2Q9UQB3 1225 aa16.42■□□□□ 0.22
UBE3B-201ENST00000340074 ARHGEF37A1IGU5 675 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 C4BPAP04003 597 aaKnown RBP16.41■□□□□ 0.22
UBE3B-201ENST00000340074 AP3M2P53677 418 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 MYO1EQ12965 1108 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 C1orf220Q5T0J3 134 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 TDRD10Q5VZ19 366 aaKnown RBP16.41■□□□□ 0.22
UBE3B-201ENST00000340074 WSCD1Q658N2 575 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 ELMSAN1Q6PJG2 1045 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 TMC5Q6UXY8 1006 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 ZC3H3Q8IXZ2 948 aaKnown RBP16.41■□□□□ 0.22
UBE3B-201ENST00000340074 KREMEN2Q8NCW0 462 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 HDAC7Q8WUI4 952 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 MKNK1Q9BUB5 465 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 ADAM7Q9H2U9 754 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 PLEKHA4Q9H4M7 779 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 SFXN1Q9H9B4 322 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 GDAP2Q9NXN4 497 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 DPP7Q9UHL4 492 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 FBXW11Q9UKB1 542 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 DSEQ9UL01 958 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 FAM50BQ9Y247 325 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 USP15Q9Y4E8 981 aaPredicted RBP16.41■□□□□ 0.22
UBE3B-201ENST00000340074 SNX9Q9Y5X1 595 aa16.41■□□□□ 0.22
UBE3B-201ENST00000340074 WDR27A2RRH5 827 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 IKBKBO14920 756 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 PHACTR2O75167 634 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 RFPL2O75678 378 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 WEE2P0C1S8 567 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 TRIM49P0CI25 452 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 TRIM49CP0CI26 452 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 EPB41P11171 864 aaKnown RBP16.4■□□□□ 0.22
UBE3B-201ENST00000340074 KRT13P13646 458 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 ITIH3Q06033 890 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 PAK1Q13153 545 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 BIRC3Q13489 604 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 TRPC3Q13507 836 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 SMAD2Q15796 467 aaKnown RBP16.4■□□□□ 0.22
UBE3B-201ENST00000340074 CES5AQ6NT32 575 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 TTI2Q6NXR4 508 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 METTL23Q86XA0 190 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 ZNF461Q8TAF7 563 aa16.4■□□□□ 0.22
UBE3B-201ENST00000340074 DUSP9Q99956 384 aaKnown RBP16.4■□□□□ 0.22
UBE3B-201ENST00000340074 CCDC195A0A1B0GUA6 201 aa16.39■□□□□ 0.21
UBE3B-201ENST00000340074 BICDL2A1A5D9 508 aa16.39■□□□□ 0.21
UBE3B-201ENST00000340074 HUS1O60921 280 aa16.39■□□□□ 0.21
UBE3B-201ENST00000340074 ABLIM3O94929 683 aa16.39■□□□□ 0.21
UBE3B-201ENST00000340074 OR4Q2P0C623 313 aa16.39■□□□□ 0.21
UBE3B-201ENST00000340074 CPB1P15086 417 aa16.39■□□□□ 0.21
UBE3B-201ENST00000340074 STX17P56962 302 aa16.39■□□□□ 0.21
UBE3B-201ENST00000340074 PDCL2Q8N4E4 241 aa16.39■□□□□ 0.21
UBE3B-201ENST00000340074 ADAMTS19Q8TE59 1207 aa16.39■□□□□ 0.21
UBE3B-201ENST00000340074 SUSD6Q92537 303 aa16.39■□□□□ 0.21
UBE3B-201ENST00000340074 OXCT2Q9BYC2 517 aaPredicted RBP16.39■□□□□ 0.21
UBE3B-201ENST00000340074 L1RE1Q9UN81 338 aa16.39■□□□□ 0.21
UBE3B-201ENST00000340074 OR6C75A6NL08 312 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 VNN1O95497 513 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 C8AP07357 584 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 MYL6P60660 151 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 ENPEPQ07075 957 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 PPP3CAQ08209 521 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 ZACNQ401N2 412 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 LIN9Q5TKA1 542 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 SV2AQ7L0J3 742 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 OR10T2Q8NGX3 314 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 SLC7A14Q8TBB6 771 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 NECAB3Q96P71 396 aaPredicted RBP16.38■□□□□ 0.21
UBE3B-201ENST00000340074 TMEM209Q96SK2 561 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 RTP3Q9BQQ7 232 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 XYLT2Q9H1B5 865 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 MMRN2Q9H8L6 949 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 NOTCH4Q99466 2003 aa16.38■□□□□ 0.21
UBE3B-201ENST00000340074 SLC16A3O15427 465 aaKnown RBP16.37■□□□□ 0.21
UBE3B-201ENST00000340074 ZMYND10O75800 440 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 MBD3O95983 291 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 ATF2P15336 505 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 GCLMP48507 274 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 MCCD1P59942 119 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-201ENST00000340074 ADCY1Q08828 1119 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 NCOA4Q13772 614 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 CBX2Q14781 532 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-201ENST00000340074 SOWAHAQ2M3V2 549 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 WDR72Q3MJ13 1102 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms