RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 MKRN3Q13064 507 aaKnown RBP12.24□□□□□ -0.45
ZNF648-201ENST00000339948 SIX1Q15475 284 aaPredicted RBP12.24□□□□□ -0.45
ZNF648-201ENST00000339948 HIF1AQ16665 826 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 C1orf146Q5VVC0 180 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 ZBTB33Q86T24 672 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 PPP1R36Q96LQ0 422 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 TUFT1Q9NNX1 390 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 NOCTQ9UK39 431 aaKnown RBP12.24□□□□□ -0.45
ZNF648-201ENST00000339948 FAM237BA0A1B0GVD1 139 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 TBX3O15119 743 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 NFX1Q12986 1120 aaKnown RBP12.24□□□□□ -0.45
ZNF648-201ENST00000339948 CDO1Q16878 200 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 BMT2Q1RMZ1 405 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 PPP1R15BQ5SWA1 713 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 ZCCHC23Q6ZST2 131 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 TMEM179Q6ZVK1 233 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 TRABD2AQ86V40 505 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 ALYREFQ86V81 257 aaKnown RBP12.24□□□□□ -0.45
ZNF648-201ENST00000339948 MAIP1Q8WWC4 291 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 USP6NLQ92738 828 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 EHMT1Q9H9B1 1298 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 IVNS1ABPQ9Y6Y0 642 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 BCORQ6W2J9 1755 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 CIB2O75838 187 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 NR1H3Q13133 447 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 BMPR2Q13873 1038 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 MTERF2Q49AM1 385 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 TXNRD3NBQ6F5E7 133 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 ARID3BQ8IVW6 561 aaPredicted RBP12.24□□□□□ -0.45
ZNF648-201ENST00000339948 FAM71AQ8IYT1 594 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 MCOLN2Q8IZK6 566 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 POU5F2Q8N7G0 328 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 LMO3Q8TAP4 145 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 GRAMD1AQ96CP6 724 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 CDCA7Q9BWT1 371 aaPredicted RBP12.24□□□□□ -0.45
ZNF648-201ENST00000339948 TMEM120AQ9BXJ8 343 aa12.24□□□□□ -0.45
ZNF648-201ENST00000339948 SEPT9Q9UHD8 586 aaPredicted RBP12.24□□□□□ -0.45
ZNF648-201ENST00000339948 CYP3A7-CYP3A51PA0A087WV96 503 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 NFIBO00712 420 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 FSCN2O14926 492 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 TOM1L1O75674 476 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 PSMD10O75832 226 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 KRT19P08727 400 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 HSPA1LP34931 641 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 SERPINB6P35237 376 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 RNF43Q68DV7 783 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 ANKS1BQ7Z6G8 1248 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 CDR2LQ86X02 465 aaPredicted RBP12.23□□□□□ -0.45
ZNF648-201ENST00000339948 WDR60Q8WVS4 1066 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 MANSC1Q9H8J5 431 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 RAVER2Q9HCJ3 691 aaKnown RBP12.23□□□□□ -0.45
ZNF648-201ENST00000339948 TMOD2Q9NZR1 351 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 NXF1Q9UBU9 619 aaKnown RBP12.23□□□□□ -0.45
ZNF648-201ENST00000339948 CCDC88AQ3V6T2 1871 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 LOC100653049A0A140TA62 436 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 FAM155BO75949 473 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 KRT34O76011 436 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 CYP3A7P24462 503 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 PTPN4P29074 926 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 VHLP40337 213 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 MRPS35P82673 323 aaKnown RBP12.23□□□□□ -0.45
ZNF648-201ENST00000339948 PTK6Q13882 451 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 SCYL2Q6P3W7 929 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.23□□□□□ -0.45
ZNF648-201ENST00000339948 LDHDQ86WU2 507 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 RFX6Q8HWS3 928 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.23□□□□□ -0.45
ZNF648-201ENST00000339948 FBXO36Q8NEA4 188 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 ACAP3Q96P50 834 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 GLIS2Q9BZE0 524 aaPredicted RBP12.23□□□□□ -0.45
ZNF648-201ENST00000339948 SEL1LQ9UBV2 794 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 SLC4A7Q9Y6M7 1214 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 ROBO1Q9Y6N7 1651 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 PARP4Q9UKK3 1724 aaKnown RBP12.23□□□□□ -0.45
ZNF648-201ENST00000339948 EDF1O60869 148 aaKnown RBP12.23□□□□□ -0.45
ZNF648-201ENST00000339948 IL1R1P14778 569 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 UGCGQ16739 394 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 CLEC16AQ2KHT3 1053 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 ACSBG2Q5FVE4 666 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 DNAJC24Q6P3W2 148 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 CASC4Q6P4E1 433 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 IZUMO2Q6UXV1 221 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 RGS9BPQ6ZS82 235 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 ZC3H3Q8IXZ2 948 aaKnown RBP12.23□□□□□ -0.45
ZNF648-201ENST00000339948 EMC1Q8N766 993 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 FAM71DQ8N9W8 422 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 FBXO41Q8TF61 875 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 PAFAH2Q99487 392 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 CADM1Q9BY67 442 aaKnown RBP12.23□□□□□ -0.45
ZNF648-201ENST00000339948 PIH1D1Q9NWS0 290 aaKnown RBP12.23□□□□□ -0.45
ZNF648-201ENST00000339948 NENFQ9UMX5 172 aa12.23□□□□□ -0.45
ZNF648-201ENST00000339948 PYGBP11216 843 aa12.22□□□□□ -0.45
ZNF648-201ENST00000339948 FGFR1P11362 822 aa12.22□□□□□ -0.45
ZNF648-201ENST00000339948 GZMAP12544 262 aa12.22□□□□□ -0.45
ZNF648-201ENST00000339948 SP100P23497 879 aaPredicted RBP12.22□□□□□ -0.45
ZNF648-201ENST00000339948 QARSP47897 775 aaKnown RBP12.22□□□□□ -0.45
ZNF648-201ENST00000339948 GRIK3Q13003 919 aa12.22□□□□□ -0.45
ZNF648-201ENST00000339948 MTMR1Q13613 665 aa12.22□□□□□ -0.45
ZNF648-201ENST00000339948 CLNKQ7Z7G1 428 aa12.22□□□□□ -0.45
ZNF648-201ENST00000339948 OLIG1Q8TAK6 271 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms