RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 KRT87PA6NCN2 255 aa22■■□□□ 1.11
RNF40-201ENST00000324685 ALDH1A1P00352 501 aa22■■□□□ 1.11
RNF40-201ENST00000324685 CD4P01730 458 aa22■■□□□ 1.11
RNF40-201ENST00000324685 LSP1P33241 339 aa22■■□□□ 1.11
RNF40-201ENST00000324685 RGS7P49802 495 aa22■■□□□ 1.11
RNF40-201ENST00000324685 KCNK10P57789 538 aa22■■□□□ 1.11
RNF40-201ENST00000324685 IRX1P78414 480 aaPredicted RBP22■■□□□ 1.11
RNF40-201ENST00000324685 MTFR1Q15390 333 aa22■■□□□ 1.11
RNF40-201ENST00000324685 CDR2LQ86X02 465 aaPredicted RBP22■■□□□ 1.11
RNF40-201ENST00000324685 BBS7Q8IWZ6 715 aa22■■□□□ 1.11
RNF40-201ENST00000324685 SYN2Q92777 582 aaPredicted RBP22■■□□□ 1.11
RNF40-201ENST00000324685 CATSPERBQ9H7T0 1116 aa22■■□□□ 1.11
RNF40-201ENST00000324685 MANSC1Q9H8J5 431 aa22■■□□□ 1.11
RNF40-201ENST00000324685 MARCOQ9UEW3 520 aaPredicted RBP22■■□□□ 1.11
RNF40-201ENST00000324685 MAGI3Q5TCQ9 1506 aa22■■□□□ 1.11
RNF40-201ENST00000324685 TMEM120BA0PK00 339 aa22■■□□□ 1.11
RNF40-201ENST00000324685 ADCY3O60266 1144 aa22■■□□□ 1.11
RNF40-201ENST00000324685 TXNP10599 105 aaKnown RBP22■■□□□ 1.11
RNF40-201ENST00000324685 YAF2Q8IY57 180 aa22■■□□□ 1.11
RNF40-201ENST00000324685 MMGT1Q8N4V1 131 aa22■■□□□ 1.11
RNF40-201ENST00000324685 USP33Q8TEY7 942 aa22■■□□□ 1.11
RNF40-201ENST00000324685 CYFIP2Q96F07 1278 aa22■■□□□ 1.11
RNF40-201ENST00000324685 PLEKHA8Q96JA3 519 aa22■■□□□ 1.11
RNF40-201ENST00000324685 C17orf80Q9BSJ5 609 aa22■■□□□ 1.11
RNF40-201ENST00000324685 OSBPL8Q9BZF1 889 aa22■■□□□ 1.11
RNF40-201ENST00000324685 H2AFY2Q9P0M6 372 aaPredicted RBP22■■□□□ 1.11
RNF40-201ENST00000324685 AIM2O14862 343 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 CLASP2O75122 1294 aaKnown RBP21.99■■□□□ 1.11
RNF40-201ENST00000324685 FKBP9O95302 570 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 ZNF543Q08ER8 600 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 TRIP10Q15642 601 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 FKBP9P1Q75LS8 142 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 HPS3Q969F9 1004 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 FRMD8Q9BZ67 464 aaPredicted RBP21.99■■□□□ 1.11
RNF40-201ENST00000324685 RGS4P49798 205 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 LRRC36Q1X8D7 754 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 LVRNQ6Q4G3 990 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 STOX1Q6ZVD7 989 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 NSL1Q96IY1 281 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 AGPAT5Q9NUQ2 364 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 FHOD1Q9Y613 1164 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 USP42Q9H9J4 1324 aaKnown RBP21.99■■□□□ 1.11
RNF40-201ENST00000324685 B2RBV5 119 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 ASMTLO95671 621 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 APOA4P06727 396 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 SBK1Q52WX2 424 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 TRIM69Q86WT6 500 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 SNX31Q8N9S9 440 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 RBM46Q8TBY0 533 aaKnown RBP21.99■■□□□ 1.11
RNF40-201ENST00000324685 OTUD5Q96G74 571 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 TUBE1Q9UJT0 475 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 RALBP11234 206 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 AKT1P31749 480 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 ACOT2P49753 483 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 PTK6Q13882 451 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 KYNUQ16719 465 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 FBXW10Q5XX13 1052 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 USP38Q8NB14 1042 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 RBBP8Q99708 897 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 SMARCAD1Q9H4L7 1026 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 TMEM8AQ9HCN3 771 aa21.99■■□□□ 1.11
RNF40-201ENST00000324685 C3orf62Q6ZUJ4 267 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 USP6NLQ92738 828 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 OVOS2A0A0G2JMS6 1433 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 OVOS2A0A0J9YW53 1432 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 OVOS2Q6IE36 1432 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 NRKQ7Z2Y5 1582 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 CCT8L1PA6NM43 557 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 ITGA8P53708 1063 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 ST8SIA6P61647 398 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 PRPF39Q86UA1 669 aaKnown RBP21.98■■□□□ 1.11
RNF40-201ENST00000324685 PPIL6Q8IXY8 311 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 MARCH10Q8NA82 808 aaPredicted RBP21.98■■□□□ 1.11
RNF40-201ENST00000324685 E2F7Q96AV8 911 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 IRX2Q9BZI1 471 aaPredicted RBP21.98■■□□□ 1.11
RNF40-201ENST00000324685 MTMR4Q9NYA4 1195 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 PCDHB2Q9Y5E7 798 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 MYBP10242 640 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 GPD1P21695 349 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 COMTP21964 271 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 SLC30A9Q6PML9 568 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 MTSS1O43312 755 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 LRRC74AQ0VAA2 488 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 MKNK1Q9BUB5 465 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 FXR1P51114 621 aaKnown RBP eCLIP21.98■■□□□ 1.11
RNF40-201ENST00000324685 ERP44Q9BS26 406 aa21.98■■□□□ 1.11
RNF40-201ENST00000324685 TRPC5OSA6NMA1 111 aa21.97■■□□□ 1.11
RNF40-201ENST00000324685 EMC2Q15006 297 aa21.97■■□□□ 1.11
RNF40-201ENST00000324685 NSUN4Q96CB9 384 aaKnown RBP21.97■■□□□ 1.11
RNF40-201ENST00000324685 KATNAL1Q9BW62 490 aa21.97■■□□□ 1.11
RNF40-201ENST00000324685 CAB39Q9Y376 341 aaPredicted RBP21.97■■□□□ 1.11
RNF40-201ENST00000324685 LRRIQ3A6PVS8 624 aaPredicted RBP21.97■■□□□ 1.11
RNF40-201ENST00000324685 UBE3AQ05086 875 aa21.97■■□□□ 1.11
RNF40-201ENST00000324685 CYLC2Q14093 348 aaPredicted RBP21.97■■□□□ 1.11
RNF40-201ENST00000324685 DDX53Q86TM3 631 aaKnown RBP21.97■■□□□ 1.11
RNF40-201ENST00000324685 LPAR1Q92633 364 aa21.97■■□□□ 1.11
RNF40-201ENST00000324685 TMEM143Q96AN5 459 aa21.97■■□□□ 1.11
RNF40-201ENST00000324685 ZIM3Q96PE6 472 aa21.97■■□□□ 1.11
RNF40-201ENST00000324685 MYMKA6NI61 221 aa21.97■■□□□ 1.11
RNF40-201ENST00000324685 GEMIN4P57678 1058 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms