RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 UNGP13051 313 aaPredicted RBP16.4■□□□□ 0.22
COPS3-201ENST00000268717 P4HA1P13674 534 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 CYP2C18P33260 490 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 ASPAP45381 313 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 NOP2P46087 812 aaKnown RBP16.4■□□□□ 0.22
COPS3-201ENST00000268717 EPHB4P54760 987 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 ITIH3Q06033 890 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 C9orf50Q5SZB4 431 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 TAF3Q5VWG9 929 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 SCARA3Q6AZY7 606 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 ACAD10Q6JQN1 1059 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 TMEM270Q6UE05 265 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 CTAGE6Q86UF2 777 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 CTAGE4Q8IX94 777 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 TTC39CQ8N584 583 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 SLC35G2Q8TBE7 412 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 THAP2Q9H0W7 228 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 CYP3A43Q9HB55 503 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 CNTN3Q9P232 1028 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 TRPV2Q9Y5S1 764 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 TANC1Q9C0D5 1861 aa16.4■□□□□ 0.22
COPS3-201ENST00000268717 SCN5AQ14524 2016 aa16.39■□□□□ 0.21
COPS3-201ENST00000268717 SOX1O00570 391 aaPredicted RBP16.39■□□□□ 0.21
COPS3-201ENST00000268717 CYP1A2P05177 515 aa16.39■□□□□ 0.21
COPS3-201ENST00000268717 GNA15P30679 374 aa16.39■□□□□ 0.21
COPS3-201ENST00000268717 RBP5P82980 135 aa16.39■□□□□ 0.21
COPS3-201ENST00000268717 PPIGQ13427 754 aaKnown RBP eCLIP16.39■□□□□ 0.21
COPS3-201ENST00000268717 SHHQ15465 462 aa16.39■□□□□ 0.21
COPS3-201ENST00000268717 ZNF667Q5HYK9 610 aa16.39■□□□□ 0.21
COPS3-201ENST00000268717 GDF6Q6KF10 455 aaPredicted RBP16.39■□□□□ 0.21
COPS3-201ENST00000268717 ALKAL1Q6UXT8 129 aa16.39■□□□□ 0.21
COPS3-201ENST00000268717 TMEM199Q8N511 208 aa16.39■□□□□ 0.21
COPS3-201ENST00000268717 RABGGTAQ92696 567 aa16.39■□□□□ 0.21
COPS3-201ENST00000268717 OSBPL9Q96SU4 736 aa16.39■□□□□ 0.21
COPS3-201ENST00000268717 TRIM6Q9C030 488 aaPredicted RBP16.39■□□□□ 0.21
COPS3-201ENST00000268717 CISHQ9NSE2 258 aa16.39■□□□□ 0.21
COPS3-201ENST00000268717 UVRAGQ9P2Y5 699 aa16.39■□□□□ 0.21
COPS3-201ENST00000268717 PIN4Q9Y237 131 aaKnown RBP16.39■□□□□ 0.21
COPS3-201ENST00000268717 TMCO5BA8MYB1 307 aa16.38■□□□□ 0.21
COPS3-201ENST00000268717 LSM8O95777 96 aaKnown RBP16.38■□□□□ 0.21
COPS3-201ENST00000268717 ITGB3P05106 788 aa16.38■□□□□ 0.21
COPS3-201ENST00000268717 CSF2RAP15509 400 aa16.38■□□□□ 0.21
COPS3-201ENST00000268717 CENPCQ03188 943 aa16.38■□□□□ 0.21
COPS3-201ENST00000268717 XKR4Q5GH76 650 aa16.38■□□□□ 0.21
COPS3-201ENST00000268717 C11orf63Q6NUN7 778 aa16.38■□□□□ 0.21
COPS3-201ENST00000268717 LRRN4CLQ8ND94 238 aa16.38■□□□□ 0.21
COPS3-201ENST00000268717 VCPIP1Q96JH7 1222 aa16.38■□□□□ 0.21
COPS3-201ENST00000268717 EIF2AQ9BY44 585 aaKnown RBP16.38■□□□□ 0.21
COPS3-201ENST00000268717 ABCB6Q9NP58 842 aa16.38■□□□□ 0.21
COPS3-201ENST00000268717 ACP6Q9NPH0 428 aa16.38■□□□□ 0.21
COPS3-201ENST00000268717 AVENQ9NQS1 362 aaPredicted RBP16.38■□□□□ 0.21
COPS3-201ENST00000268717 SNTG2Q9NY99 539 aa16.38■□□□□ 0.21
COPS3-201ENST00000268717 ABCB4P21439 1286 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 ZBTB6Q15916 424 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 PTGISQ16647 500 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 UBXN11Q5T124 520 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 FAM228AQ86W67 206 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 CREG2Q8IUH2 290 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 GPR161Q8N6U8 529 aaKnown RBP16.37■□□□□ 0.21
COPS3-201ENST00000268717 ARHGEF26Q96DR7 871 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 KIF12Q96FN5 646 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 WNT8AQ9H1J5 351 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 CHST12Q9NRB3 414 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 DPP3Q9NY33 737 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 NOD1Q9Y239 953 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.37■□□□□ 0.21
COPS3-201ENST00000268717 RALGAPA2Q2PPJ7 1873 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 XPOTO43592 962 aaKnown RBP16.37■□□□□ 0.21
COPS3-201ENST00000268717 CAND2O75155 1236 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 CLSTN1O94985 981 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 KRT19P08727 400 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 PAEPP09466 180 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 KCNE1P15382 129 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 CCL23P55773 120 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 MGAT3Q09327 533 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 ELF2Q15723 593 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 ERCC6LQ2NKX8 1250 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 DNAAF5Q86Y56 855 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 LRRC52Q8N7C0 313 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 BEST2Q8NFU1 509 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 LRCH3Q96II8 777 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 ZNF518BQ9C0D4 1074 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 PCDHGC3Q9UN70 934 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 STXBP5LQ9Y2K9 1186 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 CDY2AQ9Y6F7 541 aa16.37■□□□□ 0.21
COPS3-201ENST00000268717 PITPNM1O00562 1244 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 RECQL4O94761 1208 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 KIF4AO95239 1232 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 FTCDO95954 541 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 POLR2BP30876 1174 aaKnown RBP16.36■□□□□ 0.21
COPS3-201ENST00000268717 NSFP46459 744 aaKnown RBP16.36■□□□□ 0.21
COPS3-201ENST00000268717 NOMO3P69849 1222 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 MYO1EQ12965 1108 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 PTK7Q13308 1070 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 RPS6KA1Q15418 735 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 WDR72Q3MJ13 1102 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 C16orf59Q7L2K0 433 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 DAAM2Q86T65 1068 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 TET1Q8NFU7 2136 aa16.36■□□□□ 0.21
COPS3-201ENST00000268717 TSC1Q92574 1164 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms