RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CIB2O75838 187 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 EEF2P13639 858 aaKnown RBP13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 GTF2H1P32780 548 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 SERPINB4P48594 390 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 IKQ13123 557 aaPredicted RBP13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 CCDC142Q17RM4 750 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 KLHL38Q2WGJ6 581 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 USH1GQ495M9 461 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 PPP1R2P3Q6NXS1 205 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 PCGF5Q86SE9 256 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 FAM81AQ8TBF8 368 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 TSSK1BQ9BXA7 367 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 RANBP17Q9H2T7 1088 aaKnown RBP13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 TMEM8AQ9HCN3 771 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 SRP68Q9UHB9 627 aaKnown RBP13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 DRG1Q9Y295 367 aaKnown RBP13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 SBF2Q86WG5 1849 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 MAP3K13O43283 966 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 BMP3P12645 472 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 GSTT1P30711 240 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 PGM1P36871 562 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 MAPK6Q16659 721 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 RCOR2Q8IZ40 523 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 HELQQ8TDG4 1101 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 RBM41Q96IZ5 413 aaKnown RBP13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 EPAS1Q99814 870 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 HERPUD2Q9BSE4 406 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 MAK16Q9BXY0 300 aaKnown RBP13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 MIS12Q9H081 205 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 ASCC2Q9H1I8 757 aaPredicted RBP13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 ZNF148Q9UQR1 794 aa13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 COL5A3P25940 1745 aaPredicted RBP13.07□□□□□ -0.32
CHMP2B-201ENST00000263780 IPO5O00410 1097 aaKnown RBP13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 ZBTB39O15060 712 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 CREB3O43889 395 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 FDX1P10109 184 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 UNGP13051 313 aaPredicted RBP13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 NSFP46459 744 aaKnown RBP13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 PLEKHG4Q58EX7 1191 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 PHLDB2Q86SQ0 1253 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 OGFOD1Q8N543 542 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 RFWD2Q8NHY2 731 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 SKA1Q96BD8 255 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 GMCL1Q96IK5 515 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 CBWD1Q9BRT8 395 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 TEKT3Q9BXF9 490 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 ST6GALNAC4Q9H4F1 302 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 DDX4Q9NQI0 724 aaKnown RBP13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 TAS2R1Q9NYW7 299 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 EXOC7Q9UPT5 735 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 COL24A1Q17RW2 1714 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 A0A1W2PPM1 405 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 LIASO43766 372 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 IL1BP01584 269 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 LYNP07948 512 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 RARBP10826 455 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 KRT5P13647 590 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 HOXA13P31271 388 aaPredicted RBP13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 ARSEP51690 589 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 AP2B1P63010 937 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 DSG1Q02413 1049 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 AOC3Q16853 763 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 TRMT5Q32P41 509 aaKnown RBP13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 NET1Q7Z628 596 aaPredicted RBP13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 TMPRSS6Q8IU80 811 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 ZBED8Q8IZ13 594 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 FBXL13Q8NEE6 735 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 NCSTNQ92542 709 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 DHX38Q92620 1227 aaKnown RBP13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 ACP6Q9NPH0 428 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 PCMTD2Q9NV79 361 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 IRAK4Q9NWZ3 460 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 COMMD3-BMI1R4GMX3 469 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 ZNF831Q5JPB2 1677 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 NFASCO94856 1347 aa13.06□□□□□ -0.32
CHMP2B-201ENST00000263780 TSHRP16473 764 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 GPS1Q13098 491 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 THOC5Q13769 683 aaKnown RBP13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 FOXB2Q5VYV0 432 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 ADGRD1Q6QNK2 874 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 CHSY1Q86X52 802 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 DAW1Q8N136 415 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 ALLCQ8N6M5 410 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 ATP11CQ8NB49 1132 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 GMCL1P1Q8NEA9 526 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 DTX3LQ8TDB6 740 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 TMC2Q8TDI7 906 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 AZIN2Q96A70 460 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 LXNQ9BS40 222 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 WDR18Q9BV38 432 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 RAB20Q9NX57 234 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 KANSL3Q9P2N6 904 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 POLIQ9UNA4 740 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 BCS1LQ9Y276 419 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
CHMP2B-201ENST00000263780 SCINQ9Y6U3 715 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms