RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 DNAJC12Q9UKB3 198 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.67□□□□□ -0.74e-6■■■■□ 22
RTCB-201ENST00000216038 SPTLC1O15269 473 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 XPOTO43592 962 aaKnown RBP10.67□□□□□ -0.7
RTCB-201ENST00000216038 ZC3H11AO75152 810 aaKnown RBP eCLIP10.67□□□□□ -0.7
RTCB-201ENST00000216038 DGKIO75912 1065 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 ACTN2P35609 894 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 MAGEA10P43363 369 aaPredicted RBP10.67□□□□□ -0.7
RTCB-201ENST00000216038 RAP1GAPP47736 663 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 ARID5AQ03989 594 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 ERCC6LQ2NKX8 1250 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 TTC31Q49AM3 519 aaPredicted RBP10.67□□□□□ -0.7
RTCB-201ENST00000216038 PPM1EQ8WY54 764 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 UBXN4Q92575 508 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 KREMEN1Q96MU8 473 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 FAM193BQ96PV7 902 aaPredicted RBP10.67□□□□□ -0.7
RTCB-201ENST00000216038 PLCB1Q9NQ66 1216 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 CEP83Q9Y592 693 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 NR2E3Q9Y5X4 410 aa10.67□□□□□ -0.7
RTCB-201ENST00000216038 ANO9A1A5B4 782 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 LRRC53A6NM62 1247 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 EFCAB8A8MWE9 144 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 NT5C1B-RDH14C9J2C7 533 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 I3L4J1 428 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 PODXLO00592 558 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 PIRO00625 290 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 NRDCO43847 1150 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 BAIAP3O94812 1187 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 ITGB1P05556 798 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 WEE2P0C1S8 567 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 CCDC172P0C7W6 258 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 CD58P19256 250 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 KRT9P35527 623 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 USP8P40818 1118 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 OR1G1P47890 313 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 CDH8P55286 799 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 TUSC3Q13454 348 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 UPP1Q16831 310 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 ARHGAP29Q52LW3 1261 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 C9orf50Q5SZB4 431 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 PSRC1Q6PGN9 363 aaPredicted RBP10.66□□□□□ -0.7
RTCB-201ENST00000216038 CCDC150Q8NCX0 1101 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 SPAG5Q96R06 1193 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 MMS19Q96T76 1030 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 CEP72Q9P209 647 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 CAPN11Q9UMQ6 739 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 PRG3Q9Y2Y8 225 aaPredicted RBP10.66□□□□□ -0.7
RTCB-201ENST00000216038 LUC7L2Q9Y383 392 aaKnown RBP10.66□□□□□ -0.7
RTCB-201ENST00000216038 SNX9Q9Y5X1 595 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 REV3LO60673 3130 aa10.66□□□□□ -0.7
RTCB-201ENST00000216038 COL4A6Q14031 1691 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 AKR1B15C9JRZ8 316 aaPredicted RBP10.65□□□□□ -0.7
RTCB-201ENST00000216038 INPPL1O15357 1258 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 EFCAB14O75071 495 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 MFAP3LO75121 409 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 B3GAT3O94766 335 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 CALCAP01258 141 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 CYP3A5P20815 502 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 LILRA4P59901 499 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 MYO1EQ12965 1108 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 DRAP1Q14919 205 aaPredicted RBP10.65□□□□□ -0.7
RTCB-201ENST00000216038 ZNF667Q5HYK9 610 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 E4F1Q66K89 784 aaPredicted RBP10.65□□□□□ -0.7
RTCB-201ENST00000216038 TC2NQ8N9U0 490 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 BAP1Q92560 729 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 ZBED2Q9BTP6 218 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 NUP58Q9BVL2 599 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 NAA15Q9BXJ9 866 aaKnown RBP10.65□□□□□ -0.7
RTCB-201ENST00000216038 SMYD3Q9H7B4 428 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 NRDE2Q9H7Z3 1164 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 KANSL3Q9P2N6 904 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.65□□□□□ -0.7
RTCB-201ENST00000216038 MYO9BQ13459 2157 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 EYSQ5T1H1 3165 aa10.65□□□□□ -0.7
RTCB-201ENST00000216038 FOXN3O00409 490 aaPredicted RBP10.65□□□□□ -0.71
RTCB-201ENST00000216038 TRIM66O15016 1216 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 HOXA2O43364 376 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 KIF4AO95239 1232 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 LRPAP1P30533 357 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 ASPAP45381 313 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 CDR1P51861 262 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 CCZ1BP86790 482 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 CCZ1P86791 482 aaPredicted RBP10.65□□□□□ -0.71
RTCB-201ENST00000216038 DSC1Q08554 894 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 ORC1Q13415 861 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 CUL2Q13617 745 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 ZNF394Q53GI3 561 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 FIGNQ5HY92 759 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 LEKR1Q6ZMV7 388 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 COLGALT2Q8IYK4 626 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 TSPAN18Q96SJ8 248 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 YME1L1Q96TA2 773 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 GPR88Q9GZN0 384 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 NIF3L1Q9GZT8 377 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 ACP6Q9NPH0 428 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 SLC4A7Q9Y6M7 1214 aa10.65□□□□□ -0.71
RTCB-201ENST00000216038 FAM170AA1A519 330 aa10.64□□□□□ -0.71
RTCB-201ENST00000216038 USP27XA6NNY8 438 aa10.64□□□□□ -0.71
RTCB-201ENST00000216038 KPNA7A9QM74 516 aa10.64□□□□□ -0.71
RTCB-201ENST00000216038 F8VZ95 297 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms