RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Q80WR5 230 aa16.91■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Stxbp5Q8K400 1152 aaKnown RBP16.91■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Gm3404Q9D506 307 aa16.91■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Ttc33Q9D6K7 262 aa16.91■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Gm28360A0A087WR25 190 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Lipo2D3YY49 398 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Krt13P08730 437 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Serpinh1P19324 417 aaKnown RBP16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 RarbP22605 482 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Lrrn4P59383 733 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 PrkcbP68404 671 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 NfiaQ02780 532 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Fam81aQ3UXZ6 364 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Serpinb1cQ5SV42 375 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Plppr4Q7TME0 766 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Gpr151Q7TSN6 422 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Rbm12b1Q80YR9 836 aaKnown RBP16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Ccdc65Q8VHI7 493 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Slc12a9Q99MR3 914 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 1700129C05RikQ9CQ77 218 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Mpp2Q9WV34 552 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Olfr456B2RT27 312 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Lonrf1D3YY23 762 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Ephb2P54763 986 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Igsf9Q05BQ1 1179 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 GsapQ3TCV3 858 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Gm3414Q3TNU4 584 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Ifnl2Q4VK74 193 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Serpinb6Q60854 378 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Atp6v0d2Q80SY3 350 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Btbd9Q8C726 612 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Olfr458Q8VF80 313 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Olfr457Q8VGP5 313 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Pcdha10Q91Y20 946 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Nr1h3Q9Z0Y9 445 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Gm44503E9PYU5 387 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Rap1gds1E9Q912 607 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Gjb1P28230 283 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Gnl1P36916 607 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 9130409I23RikQ3TS87 320 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Lrch2Q3UMG5 773 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Ppp4r3cQ3V0Y1 813 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Mical2Q8BML1 960 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Gjd4Q8BSD4 364 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 AgpsQ8C0I1 645 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Orc3Q9JK30 715 aaKnown RBP16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Limd1Q9QXD8 668 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Rnf25Q9QZR0 456 aa16.9■□□□□ 0.3
Ckap4-201ENSMUST00000053871 Ttc17E9PVB5 1198 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Ptk2P34152 1090 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Oprl1P35377 367 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Uchl4P58321 233 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Abi2P62484 446 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Ugt1a2P70691 533 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Pih1d3Q3KNI6 218 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Gm5168Q4KL04 211 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Gm13103Q4VAD2 491 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Il33Q8BVZ5 266 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Taf5Q8C092 801 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Ms4a14A0A087WSD2 1232 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Dpy19l4A2AJQ3 722 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Capn6O35646 641 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Rag1P15919 1040 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 RxrbP28704 520 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Ptgs2Q05769 604 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Otud5Q3U2S4 566 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Phactr4Q501J7 694 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Npdc1Q64322 332 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Cacna2d2Q6PHS9 1154 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Wdtc1Q80ZK9 677 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Znf76Q8BMU0 568 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Rab44Q8CB87 725 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Mamdc2Q8CG85 686 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 OafQ8QZR4 282 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Golga1Q9CW79 758 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Htra2Q9JIY5 458 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Caln1Q9JJG7 219 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Ggps1Q9WTN0 300 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Col4a3Q9QZS0 1669 aa16.89■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Tatdn2B7ZNL9 783 aaKnown RBP16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Hsd17b2P51658 381 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Rps12P63323 132 aaKnown RBP16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 SbdsP70122 250 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 RenbpP82343 430 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Ino80bQ99PT3 375 aaKnown RBP16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 PygmQ9WUB3 842 aaKnown RBP16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Trip11E9Q512 1976 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Gimd1E9PW74 217 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Cyp2c69E9PXC3 491 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Taf4bG5E8Z2 855 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Bmp2P21274 394 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Fbln2P37889 1221 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 SftpbP50405 377 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Clcn3P51791 818 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Cyp2c40P56657 491 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Psmc1P62192 440 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Ly9Q01965 654 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Olfr670Q7TRP3 312 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 6820408C15RikQ8BJX2 354 aa16.88■□□□□ 0.29
Ckap4-201ENSMUST00000053871 Sh3rf3Q8C120 878 aa16.88■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 122.9 ms