RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Gm21962L7N280 338 aa11.27□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Irf8P23611 424 aa11.27□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Vamp7P70280 220 aa11.27□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Edem3Q2HXL6 931 aa11.27□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gm1604bQ3TRG0 118 aa11.27□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Prpf38bQ80SY5 542 aaKnown RBP11.27□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Rbm12b1Q80YR9 836 aaKnown RBP11.27□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Tmem145Q8C4U2 746 aa11.27□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Apol7cQ8C6E1 369 aa11.27□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Pkn3Q8K045 878 aa11.27□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Tmx2Q9D710 295 aaKnown RBP11.27□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Pdzd4Q9QY39 772 aa11.27□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Tldc2A2ACG1 198 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gm4841E9QAA8 417 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Tspyl1O88852 379 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Rbp3P49194 1234 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 InhbcP55104 352 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Col6a1Q04857 1025 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 DeptorQ570Y9 409 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ppp2r5eQ61151 467 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 2700097O09RikQ6PGK3 301 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Stk38lQ7TSE6 464 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ankzf1Q80UU1 748 aaKnown RBP11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ubap1Q8BH48 502 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Creb3l2Q8BH52 521 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Acbd3Q8BMP6 525 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Tcaf1Q8BNE1 924 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Usp33Q8R5K2 909 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Pcdh18Q8VHR0 1134 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Emc2Q9CRD2 297 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Toe1Q9D2E2 511 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Tspoap1Q7TNF8 1846 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Tada2bD3Z4Z0 420 aaKnown RBP11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gm5795E9PZN8 263 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Slc27a2O35488 620 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 CaluO35887 315 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Stra6O70491 670 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Aff1O88573 1216 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Casp14O89094 257 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Pde6bP23440 856 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Mfsd14aP70187 490 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 FerP70451 823 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ugt1a2P70691 533 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Casp7P97864 303 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ankmy2Q3TPE9 440 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Zfyve27Q3TXX3 415 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Atp13a5Q3TYU2 1216 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Fdxacb1Q3UY23 622 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Satb1Q60611 764 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ksr1Q61097 873 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Acvrl1Q61288 502 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Zswim6Q80TB7 1207 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Zswim5Q80TC6 1188 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Usp37Q8C0R0 979 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Champ1Q8K327 802 aaKnown RBP11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Hsf2bpQ9D4G2 338 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 XdhQ00519 1335 aa11.26□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Krt8P11679 490 aaKnown RBP11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gad2P48320 585 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Map3k9Q3U1V8 1077 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Tgoln2Q62314 363 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Garem2Q6PAJ3 880 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ush1gQ80T11 461 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Dus1lQ8C2P3 475 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Fbxl13Q8CDU4 790 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Nudt13Q8JZU0 352 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 HibchQ8QZS1 385 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Agap3Q8VHH5 910 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ferd3lQ923Z4 168 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Fundc1Q9DB70 155 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Atp6v1g2Q9WTT4 118 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Serpinb6cW4VSP4 379 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 NinQ61043 2035 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gm13084A2A8N0 494 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gm5936A2BG95 728 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gm5640A3KG49 728 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Oog1E9Q5G7 496 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Bcat1P24288 386 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Rad54lP70270 747 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 GmpsQ3THK7 693 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Oog3Q3UWY1 500 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Krt77Q6IFZ6 572 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Agap1Q8BXK8 857 aaKnown RBP11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Znf467Q8JZL0 594 aa11.25□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Lrrc63A6H694 637 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Prdm15E9Q8T2 1174 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Fcer2P20693 331 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Fgfr2P21803 821 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Msh2P43247 935 aaKnown RBP11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Tnni3P48787 211 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Slc1a1P51906 523 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Srebf2Q3U1N2 1130 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Rnf10Q3UIW5 804 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Ece1Q4PZA2 769 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Vmn2r26Q6TAC4 855 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Q8BGC1 442 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Gpr150Q8BL07 427 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Tarsl2Q8BLY2 790 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 N4bp3Q8C7U1 537 aa11.24□□□□□ -0.61
Ptcd1-201ENSMUST00000031628 Zfp449Q8CB76 518 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms