RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Znf541Q0GGX2 1363 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Gm3187M0QWW3 260 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Akap1O08715 857 aaKnown RBP8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Ppef1O35655 650 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Akt1P31750 480 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 UrosP51163 265 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Irx1P81068 480 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 D630036H23RikQ3UQD6 204 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Mb21d2Q8C525 428 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Arfip2Q8K221 341 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Kif19Q99PT9 997 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Stx11Q9D3G5 287 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Chit1Q9D7Q1 464 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Adgrf5G5E8Q8 1348 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Guca2bO09051 106 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 C1dO35473 141 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Usp28Q5I043 1051 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Tnfaip2Q61333 691 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 KynuQ9CXF0 464 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Ngly1Q9JI78 651 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Gabbr1Q9WV18 960 aa8.64□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Mpp3O88910 568 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Rrm1P07742 792 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Rad51Q08297 339 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Itga7Q61738 1179 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Vil1Q62468 827 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Stambpl1Q76N33 436 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Trim65Q8BFW4 522 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 FtcdQ91XD4 541 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Cse1lQ9ERK4 971 aaKnown RBP8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Ccdc88cQ6VGS5 2009 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Gm7168A0AUV4 508 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Gm8113E0CXS8 587 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Gja5Q01231 358 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Ppp2r2aQ6P1F6 447 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 HadhaQ8BMS1 763 aaKnown RBP8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Usp44Q8C2S0 711 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Nrif2Q921B4 824 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Cstf3Q99LI7 717 aaKnown RBP8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 4930469K13RikA0A286YDB2 92 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Gm8994E9PV04 411 aaKnown RBP8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Gm3182K7N6T8 263 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Pdk1Q8BFP9 434 aaKnown RBP8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Snx9Q91VH2 595 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Q9D9D9 101 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Hic1Q9R1Y5 733 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Phlpp1Q8CHE4 1687 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Gm8298J3QPI0 401 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Csn1s1P19228 313 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Myl2P51667 166 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Runx1t1Q61909 577 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Gga3Q8BMI3 718 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Trim47Q8C0E3 641 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Parp9Q8CAS9 866 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 OafQ8QZR4 282 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Adrm1Q9JKV1 407 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Map3k6Q9WTR2 1291 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Arrdc4A0A0B4J1F4 415 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Cylc2B1AWN8 422 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Vmn2r5K7N788 911 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Orc2Q60862 576 aaKnown RBP8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Best3Q6H1V1 669 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Ube2oQ6ZPJ3 1288 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Otop3Q80UF9 577 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Klhl12Q8BZM0 568 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Vps50Q8CI71 964 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 H2afyQ9QZQ8 372 aaKnown RBP8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Gm21497A0A087WRK3 222 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Gm21964A0A1W2P7S4 437 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Lrrc38A2VDH3 298 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Ddit3P35639 168 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 FynP39688 537 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Gjb6P70689 261 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Vgll3P85442 326 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Rrp36Q3UFY0 244 aaKnown RBP8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Ccna1Q61456 421 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Q8BWQ6 963 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Btbd6Q8K2J9 488 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Ccdc137Q8R0K4 290 aaKnown RBP8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Pex19Q8VCI5 299 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Rbm42Q91V81 474 aaKnown RBP8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Fam111aQ9D2L9 613 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Klc4Q9DBS5 619 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 CdylQ9WTK2 593 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Mindy4b-psA0A1W2P7H6 457 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 ChrngP04760 519 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Nr5a1P33242 462 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Scg3P47867 471 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 MagohP61327 146 aaKnown RBP8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 SelpQ01102 768 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Tmc5Q32NZ6 967 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Odr4Q4PJX1 447 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Cyp3a13Q64464 503 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Ddx55Q6ZPL9 600 aaKnown RBP8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Rusc1Q8BG26 893 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 MagohbQ9CQL1 146 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Ppil2Q9D787 521 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Scube2Q9JJS0 997 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Actl7aQ9QY84 440 aa8.63□□□□□ -1.03
Ssr1-201ENSMUST00000021864 Rgs12Q8CGE9 1381 aa8.63□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms