RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 YHR214C-EQ8TGK0 99 aa0.3□□□□□ -2.36
snR54snR54 URA5P13298 226 aaKnown RBP0.29□□□□□ -2.36
snR54snR54 KSS1P14681 368 aa0.29□□□□□ -2.36
snR54snR54 AST2P39945 430 aaKnown RBP0.29□□□□□ -2.36
snR54snR54 MPC3P53311 146 aa0.29□□□□□ -2.36
snR54snR54 PET117Q02771 107 aa0.29□□□□□ -2.36
snR54snR54 MED4Q12343 284 aa0.29□□□□□ -2.36
snR54snR54 INO80P53115 1489 aa0.29□□□□□ -2.36
snR54snR54 SPO13P23624 291 aa0.28□□□□□ -2.36
snR54snR54 STP22P25604 385 aa0.28□□□□□ -2.36
snR54snR54 TVP23P38962 199 aa0.28□□□□□ -2.36
snR54snR54 RMD6P39975 231 aa0.28□□□□□ -2.36
snR54snR54 FMC1P40491 155 aa0.28□□□□□ -2.36
snR54snR54 YGR050CP53231 118 aa0.28□□□□□ -2.36
snR54snR54 YPR174CQ06616 221 aaPredicted RBP0.28□□□□□ -2.36
snR54snR54 RPB3P16370 318 aaKnown RBP0.27□□□□□ -2.37
snR54snR54 YCR016WP25617 290 aaKnown RBP0.27□□□□□ -2.37
snR54snR54 MSN4P33749 630 aa0.27□□□□□ -2.37
snR54snR54 YLR460CP54007 376 aa0.27□□□□□ -2.37
snR54snR54 LAP3Q01532 483 aaKnown RBP RIP-Chip data0.27□□□□□ -2.37not detected
snR54snR54 HFA1P32874 2273 aa0.26□□□□□ -2.37
snR54snR54 RHO1P06780 209 aaKnown RBP0.26□□□□□ -2.37
snR54snR54 PTM1P32857 523 aa0.26□□□□□ -2.37
snR54snR54 YEA4P40004 342 aa0.26□□□□□ -2.37
snR54snR54 COX15P40086 486 aa0.26□□□□□ -2.37
snR54snR54 MIC26P50087 233 aa0.26□□□□□ -2.37
snR54snR54 RRN5Q02983 363 aa0.26□□□□□ -2.37
snR54snR54 YLR283WQ05867 314 aa0.26□□□□□ -2.37
snR54snR54 SEC4P07560 215 aaKnown RBP0.25□□□□□ -2.37
snR54snR54 MIC12P38341 106 aa0.25□□□□□ -2.37
snR54snR54 YHL018WP38744 120 aaPredicted RBP0.25□□□□□ -2.37
snR54snR54 PET191Q02772 108 aa0.25□□□□□ -2.37
snR54snR54 COA3Q3E7B2 85 aa0.25□□□□□ -2.37
snR54snR54 CDC36P06100 191 aaPredicted RBP0.24□□□□□ -2.37
snR54snR54 SSO1P32867 290 aa0.24□□□□□ -2.37
snR54snR54 DGA1Q08650 418 aa0.24□□□□□ -2.37
snR54snR54 FIT2Q08906 153 aa0.24□□□□□ -2.37
snR54snR54 RPL28P02406 149 aaKnown RBP0.23□□□□□ -2.37
snR54snR54 YMR31P19955 123 aa0.23□□□□□ -2.37
snR54snR54 UGX2P32772 223 aa0.23□□□□□ -2.37
snR54snR54 PRX1P34227 261 aaKnown RBP0.23□□□□□ -2.37
snR54snR54 HPA3P39979 161 aa0.23□□□□□ -2.37
snR54snR54 POR1P04840 283 aaKnown RBP0.22□□□□□ -2.37
snR54snR54 IKI3Q06706 1349 aaKnown RBP0.21□□□□□ -2.38
snR54snR54 THP2O13539 261 aaKnown RBP0.21□□□□□ -2.38
snR54snR54 CKS1P20486 150 aaKnown RBP0.21□□□□□ -2.38
snR54snR54 VMA6P32366 345 aaKnown RBP0.21□□□□□ -2.38
snR54snR54 RPB7P34087 171 aa0.21□□□□□ -2.38
snR54snR54 RTC3P38804 111 aaPredicted RBP0.21□□□□□ -2.38
snR54snR54 YNG1Q08465 219 aa0.21□□□□□ -2.38
snR54snR54 ODC2Q99297 307 aa0.21□□□□□ -2.38
snR54snR54 COX8P04039 78 aa0.2□□□□□ -2.38
snR54snR54 GCN3P14741 305 aa0.2□□□□□ -2.38
snR54snR54 COG5P53951 403 aa0.2□□□□□ -2.38
snR54snR54 DAD4P69851 72 aa0.2□□□□□ -2.38
snR54snR54 RNH202Q05635 350 aa0.2□□□□□ -2.38
snR54snR54 PRP11Q07350 266 aaPredicted RBP0.2□□□□□ -2.38
snR54snR54 YPR013CQ12145 317 aa0.2□□□□□ -2.38
snR54snR54 PAN3P36102 679 aaPredicted RBP0.19□□□□□ -2.38
snR54snR54 ECM4P36156 370 aa0.19□□□□□ -2.38
snR54snR54 ADO1P47143 340 aaKnown RBP0.19□□□□□ -2.38
snR54snR54 LSM7P53905 115 aaKnown RBP0.19□□□□□ -2.38
snR54snR54 YDR391CQ04170 232 aa0.19□□□□□ -2.38
snR54snR54 IRC23Q08416 157 aa0.19□□□□□ -2.38
snR54snR54 DUR1,2P32528 1835 aaKnown RBP0.18□□□□□ -2.38
snR54snR54 RPL25P04456 142 aaKnown RBP0.18□□□□□ -2.38
snR54snR54 MAG1P22134 296 aaKnown RBP0.18□□□□□ -2.38
snR54snR54 OCH1P31755 480 aa0.18□□□□□ -2.38
snR54snR54 MRPL15P36523 253 aa0.18□□□□□ -2.38
snR54snR54 GET1P53192 235 aa0.18□□□□□ -2.38
snR54snR54 PDR17P53844 350 aa0.18□□□□□ -2.38
snR54snR54 UPS3Q04006 179 aa0.18□□□□□ -2.38
snR54snR54 HNT1Q04344 158 aaKnown RBP0.18□□□□□ -2.38
snR54snR54 YKL183C-AQ3E765 70 aa0.18□□□□□ -2.38
snR54snR54 YLR422WQ06409 1932 aa0.17□□□□□ -2.38
snR54snR54 SEN2P16658 377 aa0.17□□□□□ -2.38
snR54snR54 MGA1P53050 456 aa0.17□□□□□ -2.38
snR54snR54 BNA7Q04066 261 aa0.17□□□□□ -2.38
snR54snR54 JLP1Q12358 412 aa0.17□□□□□ -2.38
snR54snR54 MER1P16523 270 aa0.16□□□□□ -2.38
snR54snR54 RPL24BP24000 155 aaKnown RBP0.16□□□□□ -2.38
snR54snR54 YER085CP40058 173 aa0.16□□□□□ -2.38
snR54snR54 AIM25P47140 327 aa0.16□□□□□ -2.38
snR54snR54 THG1P53215 237 aaKnown RBP0.16□□□□□ -2.38
snR54snR54 YPR203WQ08994 102 aa0.16□□□□□ -2.38
snR54snR54 SEY1Q99287 776 aa0.16□□□□□ -2.38
snR54snR54 YHL037CP38733 133 aa0.15□□□□□ -2.39
snR54snR54 ERG28P40030 148 aa0.15□□□□□ -2.39
snR54snR54 HMF1P40037 129 aaKnown RBP0.15□□□□□ -2.39
snR54snR54 ERG10P41338 398 aaKnown RBP0.15□□□□□ -2.39
snR54snR54 MET31Q03081 177 aa0.15□□□□□ -2.39
snR54snR54 FMP49A0A023PZB3 126 aa0.14□□□□□ -2.39
snR54snR54 YBR121C-AP0C5L4 52 aa0.14□□□□□ -2.39
snR54snR54 PHO85P17157 305 aa0.14□□□□□ -2.39
snR54snR54 PPA2P28239 310 aa0.14□□□□□ -2.39
snR54snR54 SPS18P32572 300 aa0.14□□□□□ -2.39
snR54snR54 YNL194CP40169 301 aa0.14□□□□□ -2.39
snR54snR54 YFL051CP43552 160 aa0.14□□□□□ -2.39
snR54snR54 YMR099CQ03161 297 aaKnown RBP0.14□□□□□ -2.39
snR54snR54 YDR157WA0A023PZE8 133 aa0.13□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms