RNA–Protein interactions for RNA: snR13

snR13, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR13, Length 124 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR13	snR13	RPB3	P16370	318 aa	Known RBP	0.61	□□□□□ -2.31
snR13	snR13	RPL24B	P24000	155 aa	Known RBP	0.61	□□□□□ -2.31
snR13	snR13	YHL042W	P38729	150 aa		0.61	□□□□□ -2.31
snR13	snR13	YER034W	P40022	185 aa	Known RBP	0.61	□□□□□ -2.31
snR13	snR13	YER085C	P40058	173 aa		0.61	□□□□□ -2.31
snR13	snR13	YFL065C	P43539	102 aa		0.61	□□□□□ -2.31
snR13	snR13	YGR050C	P53231	118 aa		0.61	□□□□□ -2.31
snR13	snR13	YOL160W	Q08321	113 aa		0.61	□□□□□ -2.31
snR13	snR13	YFR032C-B	Q8TGU2	87 aa		0.61	□□□□□ -2.31
snR13	snR13	SEC4	P07560	215 aa	Known RBP	0.6	□□□□□ -2.31
snR13	snR13	ATP15	P21306	62 aa		0.6	□□□□□ -2.31
snR13	snR13	PPA2	P28239	310 aa		0.6	□□□□□ -2.31
snR13	snR13	MGM101	P32787	269 aa	Known RBP	0.6	□□□□□ -2.31
snR13	snR13	PRX1	P34227	261 aa	Known RBP	0.6	□□□□□ -2.31
snR13	snR13	YPL073C	P40323	161 aa		0.6	□□□□□ -2.31
snR13	snR13	HYR1	P40581	163 aa	Known RBP	0.6	□□□□□ -2.31
snR13	snR13	YPR174C	Q06616	221 aa	Predicted RBP	0.6	□□□□□ -2.31
snR13	snR13	CYR1	P08678	2026 aa	Known RBP	0.59	□□□□□ -2.31
snR13	snR13	GCN3	P14741	305 aa		0.59	□□□□□ -2.31
snR13	snR13	CKS1	P20486	150 aa	Known RBP	0.59	□□□□□ -2.31
snR13	snR13	RTC3	P38804	111 aa	Predicted RBP	0.59	□□□□□ -2.31
snR13	snR13	TVP23	P38962	199 aa		0.59	□□□□□ -2.31
snR13	snR13	ADO1	P47143	340 aa	Known RBP	0.59	□□□□□ -2.31
snR13	snR13	YRA1	Q12159	226 aa	Known RBP	0.59	□□□□□ -2.31
snR13	snR13	IKI3	Q06706	1349 aa	Known RBP	0.59	□□□□□ -2.32
snR13	snR13	MDM35	O60200	86 aa		0.58	□□□□□ -2.32
snR13	snR13	RPL25	P04456	142 aa	Known RBP	0.58	□□□□□ -2.32
snR13	snR13	MAG1	P22134	296 aa	Known RBP	0.58	□□□□□ -2.32
snR13	snR13	SPO13	P23624	291 aa		0.58	□□□□□ -2.32
snR13	snR13	YFH7	P43591	353 aa		0.58	□□□□□ -2.32
snR13	snR13	MPC3	P53311	146 aa		0.58	□□□□□ -2.32
snR13	snR13	JLP1	Q12358	412 aa		0.58	□□□□□ -2.32
snR13	snR13	SEY1	Q99287	776 aa		0.58	□□□□□ -2.32
snR13	snR13	ACC1	Q00955	2233 aa	Known RBP	0.58	□□□□□ -2.32
snR13	snR13	YBR121C-A	P0C5L4	52 aa		0.57	□□□□□ -2.32
snR13	snR13	ECM4	P36156	370 aa		0.57	□□□□□ -2.32
snR13	snR13	RTR1	P40084	226 aa	Predicted RBP	0.57	□□□□□ -2.32
snR13	snR13	YRB1	P41920	201 aa	Known RBP	0.57	□□□□□ -2.32
snR13	snR13	MGA1	P53050	456 aa		0.57	□□□□□ -2.32
snR13	snR13	PDR17	P53844	350 aa		0.57	□□□□□ -2.32
snR13	snR13	LSM7	P53905	115 aa	Known RBP	0.57	□□□□□ -2.32
snR13	snR13	COG5	P53951	403 aa		0.57	□□□□□ -2.32
snR13	snR13	PET191	Q02772	108 aa		0.57	□□□□□ -2.32
snR13	snR13	YMR252C	Q04814	134 aa		0.57	□□□□□ -2.32
snR13	snR13	YKL183C-A	Q3E765	70 aa		0.57	□□□□□ -2.32
snR13	snR13	CDC36	P06100	191 aa	Predicted RBP	0.56	□□□□□ -2.32
snR13	snR13	YCL042W	P25572	119 aa		0.56	□□□□□ -2.32
snR13	snR13	BMH2	P34730	273 aa	Known RBP	0.56	□□□□□ -2.32
snR13	snR13	ERG28	P40030	148 aa		0.56	□□□□□ -2.32
snR13	snR13	HMF1	P40037	129 aa	Known RBP	0.56	□□□□□ -2.32
snR13	snR13	ODC2	Q99297	307 aa		0.56	□□□□□ -2.32
snR13	snR13	POR1	P04840	283 aa	Known RBP	0.55	□□□□□ -2.32
snR13	snR13	MER1	P16523	270 aa		0.55	□□□□□ -2.32
snR13	snR13	PAN3	P36102	679 aa	Predicted RBP	0.55	□□□□□ -2.32
snR13	snR13	YNL194C	P40169	301 aa		0.55	□□□□□ -2.32
snR13	snR13	IRC18	P47056	224 aa		0.55	□□□□□ -2.32
snR13	snR13	HNT1	Q04344	158 aa	Known RBP	0.55	□□□□□ -2.32
snR13	snR13	YNG1	Q08465	219 aa		0.55	□□□□□ -2.32
snR13	snR13	DGA1	Q08650	418 aa		0.55	□□□□□ -2.32
snR13	snR13	MDM32	Q12171	622 aa		0.55	□□□□□ -2.32
snR13	snR13	NHP6B	P11633	99 aa	Known RBP	0.54	□□□□□ -2.32
snR13	snR13	SPS18	P32572	300 aa		0.54	□□□□□ -2.32
snR13	snR13	CBT1	P36038	271 aa	Predicted RBP	0.54	□□□□□ -2.32
snR13	snR13	YHL018W	P38744	120 aa	Predicted RBP	0.54	□□□□□ -2.32
snR13	snR13	TRM5	P38793	499 aa		0.54	□□□□□ -2.32
snR13	snR13	YEL008W	P40001	126 aa		0.54	□□□□□ -2.32
snR13	snR13	YIL177C	P40434	1758 aa		0.54	□□□□□ -2.32
snR13	snR13	YJL225C	P40889	1758 aa		0.54	□□□□□ -2.32
snR13	snR13	STE18	P18852	110 aa		0.53	□□□□□ -2.32
snR13	snR13	STP22	P25604	385 aa		0.53	□□□□□ -2.32
snR13	snR13	OCH1	P31755	480 aa		0.53	□□□□□ -2.32
snR13	snR13	HPA3	P39979	161 aa		0.53	□□□□□ -2.32
snR13	snR13	OTU1	P43558	301 aa		0.53	□□□□□ -2.32
snR13	snR13	GET1	P53192	235 aa		0.53	□□□□□ -2.32
snR13	snR13	YDR157W	A0A023PZE8	133 aa		0.52	□□□□□ -2.33
snR13	snR13	YCR090C	P25654	182 aa	Known RBP	0.52	□□□□□ -2.33
snR13	snR13	PRP18	P33411	251 aa	Predicted RBP	0.52	□□□□□ -2.33
snR13	snR13	YLR460C	P54007	376 aa		0.52	□□□□□ -2.33
snR13	snR13	DAD4	P69851	72 aa		0.52	□□□□□ -2.33
snR13	snR13	PRP11	Q07350	266 aa	Predicted RBP	0.52	□□□□□ -2.33
snR13	snR13	IRC23	Q08416	157 aa		0.52	□□□□□ -2.33
snR13	snR13	COA3	Q3E7B2	85 aa		0.52	□□□□□ -2.33
snR13	snR13	NCB2	Q92317	146 aa		0.52	□□□□□ -2.33
snR13	snR13	COX8	P04039	78 aa		0.51	□□□□□ -2.33
snR13	snR13	COQ1	P18900	473 aa		0.51	□□□□□ -2.33
snR13	snR13	RPB7	P34087	171 aa		0.51	□□□□□ -2.33
snR13	snR13	YCR087C-A	P37263	153 aa		0.51	□□□□□ -2.33
snR13	snR13	ERG10	P41338	398 aa	Known RBP	0.51	□□□□□ -2.33
snR13	snR13	AIM25	P47140	327 aa		0.51	□□□□□ -2.33
snR13	snR13	RAD17	P48581	401 aa		0.51	□□□□□ -2.33
snR13	snR13	CWC23	P52868	283 aa	Predicted RBP	0.51	□□□□□ -2.33
snR13	snR13	LCL2	Q08045	131 aa		0.51	□□□□□ -2.33
snR13	snR13	FIT2	Q08906	153 aa		0.51	□□□□□ -2.33
snR13	snR13	CDC33	P07260	213 aa	Known RBP	0.5	□□□□□ -2.33
snR13	snR13	YEA4	P40004	342 aa		0.5	□□□□□ -2.33
snR13	snR13	DIG2	Q03373	323 aa	Known RBP	0.5	□□□□□ -2.33
snR13	snR13	UPS3	Q04006	179 aa		0.5	□□□□□ -2.33
snR13	snR13	RNH202	Q05635	350 aa		0.5	□□□□□ -2.33
snR13	snR13	PHO85	P17157	305 aa		0.49	□□□□□ -2.33
snR13	snR13	AIM2	P39721	246 aa		0.49	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 109.5 ms