RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	TOS8	P53147	276 aa		0.27	□□□□□ -2.37
SEC8	YPR055W	YMD8	Q03697	442 aa		0.27	□□□□□ -2.37
SEC8	YPR055W	PDR18	P53756	1333 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	RPL27B	P0C2H7	136 aa	Known RBP	0.26	□□□□□ -2.37
SEC8	YPR055W	MATALPHA1	P0CY06	175 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	HMLALPHA1	P0CY07	175 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	TIR3	P40552	269 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	RAD17	P48581	401 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	RMR1	P53060	241 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	BOL2	P53082	120 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	SSQ1	Q05931	657 aa	Predicted RBP	0.26	□□□□□ -2.37
SEC8	YPR055W	PAM18	Q07914	168 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	ATG31	Q12421	196 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	YOR020W-A	Q3E824	90 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	RIF1	P29539	1916 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	EBP2	P36049	427 aa	Known RBP	0.26	□□□□□ -2.37
SEC8	YPR055W	PEX17	P40155	199 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	NUP57	P48837	541 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	BUD25	P85052	153 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	GAS3	Q03655	524 aa		0.26	□□□□□ -2.37
SEC8	YPR055W	ECM29	P38737	1868 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	FZF1	P32805	299 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	YKL075C	P36083	450 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	URA8	P38627	578 aa	Predicted RBP	0.25	□□□□□ -2.37
SEC8	YPR055W	AIM2	P39721	246 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	YJR056C	P47115	236 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	NSA1	P53136	463 aa	Predicted RBP	0.25	□□□□□ -2.37
SEC8	YPR055W	GRX5	Q02784	150 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	CSM4	Q08955	156 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	USB1	Q12208	290 aa	Known RBP	0.25	□□□□□ -2.37
SEC8	YPR055W	ACC1	Q00955	2233 aa	Known RBP	0.25	□□□□□ -2.37
SEC8	YPR055W	SIR2	P06700	562 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	CPA1	P07258	411 aa	Known RBP	0.25	□□□□□ -2.37
SEC8	YPR055W	CDC10	P25342	322 aa	Known RBP	0.25	□□□□□ -2.37
SEC8	YPR055W	LHP1	P33399	275 aa	Known RBP	0.25	□□□□□ -2.37
SEC8	YPR055W	SRY1	P36007	326 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	TRM5	P38793	499 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	GCN20	P43535	752 aa	Known RBP	0.25	□□□□□ -2.37
SEC8	YPR055W	ALG13	P53178	202 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	YNL247W	P53852	767 aa	Known RBP	0.25	□□□□□ -2.37
SEC8	YPR055W	RRN5	Q02983	363 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	YLR173W	Q06247	608 aa		0.25	□□□□□ -2.37
SEC8	YPR055W	YLR156W	P0CE96	114 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	YLR159W	P0CE97	114 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	YLR161W	P0CE98	114 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	ARC19	P33204	171 aa	Known RBP	0.24	□□□□□ -2.37
SEC8	YPR055W	NTF2	P33331	125 aa	Known RBP	0.24	□□□□□ -2.37
SEC8	YPR055W	VPS21	P36017	210 aa	Known RBP	0.24	□□□□□ -2.37
SEC8	YPR055W	PET100	P38958	111 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	GAA1	P39012	614 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	IRC22	P40006	225 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	YNL217W	P40152	326 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	RPL13B	P40212	199 aa	Known RBP	0.24	□□□□□ -2.37
SEC8	YPR055W	LIA1	P47120	325 aa	Known RBP	0.24	□□□□□ -2.37
SEC8	YPR055W	YJR149W	P47177	404 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	RPL37A	P49166	88 aa	Known RBP	0.24	□□□□□ -2.37
SEC8	YPR055W	LPP1	Q04396	274 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	PSF1	Q12488	208 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	RPL13A	Q12690	199 aa	Predicted RBP	0.24	□□□□□ -2.37
SEC8	YPR055W	GPA2	P10823	449 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	MSN4	P33749	630 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	ILM1	P47155	203 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	ARO8	P53090	500 aa	Known RBP	0.24	□□□□□ -2.37
SEC8	YPR055W	CGR1	P53188	120 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	TDA8	Q6B2U8	126 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	YHR214C-E	Q8TGK0	99 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	MSB2	P32334	1306 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	DBF2	P22204	572 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	MEI4	P29467	408 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	HAM1	P47119	197 aa	Known RBP	0.24	□□□□□ -2.37
SEC8	YPR055W	MPA43	P53583	542 aa	Predicted RBP	0.24	□□□□□ -2.37
SEC8	YPR055W	SNZ1	Q03148	297 aa		0.24	□□□□□ -2.37
SEC8	YPR055W	SLH1	P53327	1967 aa	Known RBP	0.24	□□□□□ -2.37
SEC8	YPR055W	CDC28	P00546	298 aa	Known RBP	0.23	□□□□□ -2.37
SEC8	YPR055W	REP2	P03872	296 aa		0.23	□□□□□ -2.37
SEC8	YPR055W	RHO1	P06780	209 aa	Known RBP	0.23	□□□□□ -2.37
SEC8	YPR055W	ATG22	P25568	528 aa		0.23	□□□□□ -2.37
SEC8	YPR055W	YCR016W	P25617	290 aa	Known RBP	0.23	□□□□□ -2.37
SEC8	YPR055W	UPS2	P35200	230 aa		0.23	□□□□□ -2.37
SEC8	YPR055W	MIC12	P38341	106 aa		0.23	□□□□□ -2.37
SEC8	YPR055W	DOG2	P38773	246 aa		0.23	□□□□□ -2.37
SEC8	YPR055W	PET117	Q02771	107 aa		0.23	□□□□□ -2.37
SEC8	YPR055W	TPO4	Q12256	659 aa		0.23	□□□□□ -2.37
SEC8	YPR055W	SEN2	P16658	377 aa		0.23	□□□□□ -2.37
SEC8	YPR055W	MRS4	P23500	304 aa		0.23	□□□□□ -2.37
SEC8	YPR055W	RMD6	P39975	231 aa		0.23	□□□□□ -2.37
SEC8	YPR055W	SEY1	Q99287	776 aa		0.23	□□□□□ -2.37
SEC8	YPR055W	YLR422W	Q06409	1932 aa		0.23	□□□□□ -2.37
SEC8	YPR055W	MRPL25	P23369	157 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	UBC6	P33296	250 aa	Predicted RBP	0.22	□□□□□ -2.37
SEC8	YPR055W	CUE1	P38428	203 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	SVP26	P38869	228 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	PRE6	P40303	254 aa	Known RBP	0.22	□□□□□ -2.37
SEC8	YPR055W	HUA1	P40325	198 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	ICE2	P40499	491 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	ABF2	Q02486	183 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	SAC3	P46674	1301 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	TIM9	O74700	87 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	AQY2	P0CD90	149 aa		0.22	□□□□□ -2.37
SEC8	YPR055W	NMT1	P14743	455 aa		0.22	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms