RNA–Protein interactions for RNA: YPR019W

MCM4, Transcript of Essential helicase component of heterohexameric MCM2-7 complexes, yeast

Gene MCM4, Length 2,802 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCM4	YPR019W	HRR25	P29295	494 aa	Known RBP	4.09	□□□□□ -1.75
MCM4	YPR019W	NSG2	P53898	299 aa		4.09	□□□□□ -1.75
MCM4	YPR019W	YNL277W-A	Q3E7Z0	62 aa		4.09	□□□□□ -1.75
MCM4	YPR019W	RPL15A	P05748	204 aa	Known RBP	4.09	□□□□□ -1.75
MCM4	YPR019W	CKS1	P20486	150 aa	Known RBP	4.09	□□□□□ -1.75
MCM4	YPR019W	PTC1	P35182	281 aa		4.09	□□□□□ -1.75
MCM4	YPR019W	YGL082W	P53155	381 aa		4.09	□□□□□ -1.75
MCM4	YPR019W	FMP48	P53233	369 aa		4.09	□□□□□ -1.75
MCM4	YPR019W	RPL15B	P54780	204 aa	Predicted RBP	4.09	□□□□□ -1.75
MCM4	YPR019W	VHS1	Q03785	461 aa		4.09	□□□□□ -1.75
MCM4	YPR019W	FCF2	Q12035	217 aa	Predicted RBP	4.09	□□□□□ -1.75
MCM4	YPR019W	SWR1	Q05471	1514 aa		4.09	□□□□□ -1.76
MCM4	YPR019W	RPS13	P05756	151 aa	Known RBP	4.08	□□□□□ -1.76
MCM4	YPR019W	TIR1	P10863	254 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	URA10	P30402	227 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	TIF34	P40217	347 aa	Known RBP	4.08	□□□□□ -1.76
MCM4	YPR019W	TDA7	P53882	636 aa	Predicted RBP	4.08	□□□□□ -1.76
MCM4	YPR019W	SPC3	Q12133	184 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	YDR215C	Q12240	137 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	Q0255	P03881	472 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	TKL2	P33315	681 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	SFT1	P43682	97 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	SCS3	P53012	380 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	DAD3	P69850	94 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	YPL034W	Q03083	165 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	HSL1	P34244	1518 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	TRM3	Q07527	1436 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	SEC17	P32602	292 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	TIM17	P39515	158 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	EDC2	P40023	145 aa	Predicted RBP	4.08	□□□□□ -1.76
MCM4	YPR019W	FIP1	P45976	327 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	VPS25	P47142	202 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	COS10	P52924	374 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	ALG9	P53868	555 aa	Known RBP	4.08	□□□□□ -1.76
MCM4	YPR019W	APJ1	P53940	528 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	VPS28	Q02767	242 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	YLR111W	Q12528	110 aa		4.08	□□□□□ -1.76
MCM4	YPR019W	MRS3	P10566	314 aa		4.07	□□□□□ -1.76
MCM4	YPR019W	YCR022C	P25620	114 aa		4.07	□□□□□ -1.76
MCM4	YPR019W	SRL3	P36167	246 aa		4.07	□□□□□ -1.76
MCM4	YPR019W	LSM8	P47093	109 aa	Known RBP	4.07	□□□□□ -1.76
MCM4	YPR019W	PIR3	Q03180	325 aa		4.07	□□□□□ -1.76
MCM4	YPR019W	YPL278C	Q08990	100 aa		4.07	□□□□□ -1.76
MCM4	YPR019W	YLR112W	Q12130	139 aa		4.07	□□□□□ -1.76
MCM4	YPR019W	YBL008W-A	Q3E821	79 aa		4.07	□□□□□ -1.76
MCM4	YPR019W	SPS2	P08459	502 aa		4.07	□□□□□ -1.76
MCM4	YPR019W	SRP21	P32342	167 aa		4.07	□□□□□ -1.76
MCM4	YPR019W	YBL081W	P38180	368 aa	Known RBP	4.07	□□□□□ -1.76
MCM4	YPR019W	GGC1	P38988	300 aa		4.07	□□□□□ -1.76
MCM4	YPR019W	YGL088W	P53151	121 aa		4.07	□□□□□ -1.76
MCM4	YPR019W	YKR005C	Q02203	525 aa		4.07	□□□□□ -1.76
MCM4	YPR019W	YMR099C	Q03161	297 aa	Known RBP	4.07	□□□□□ -1.76
MCM4	YPR019W	ATS1	P31386	333 aa		4.06	□□□□□ -1.76
MCM4	YPR019W	SIP2	P34164	415 aa	Known RBP	4.06	□□□□□ -1.76
MCM4	YPR019W	YKR070W	P36151	352 aa	Known RBP	4.06	□□□□□ -1.76
MCM4	YPR019W	YHC1	Q05900	231 aa	Known RBP	4.06	□□□□□ -1.76
MCM4	YPR019W	YPS3	Q12303	508 aa		4.06	□□□□□ -1.76
MCM4	YPR019W	LDB16	P25587	256 aa		4.06	□□□□□ -1.76
MCM4	YPR019W	FMP46	P36141	133 aa	Known RBP	4.06	□□□□□ -1.76
MCM4	YPR019W	YBR063C	P38083	404 aa		4.06	□□□□□ -1.76
MCM4	YPR019W	TTI2	P47168	421 aa		4.06	□□□□□ -1.76
MCM4	YPR019W	SDS23	P53172	527 aa		4.06	□□□□□ -1.76
MCM4	YPR019W	RPN13	O13563	156 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	CCA1	P21269	546 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	SMP1	P38128	452 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	YHR140W	P38842	239 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	PRE5	P40302	234 aa	Known RBP	4.05	□□□□□ -1.76
MCM4	YPR019W	TDA8	Q6B2U8	126 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	DNA2	P38859	1522 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	CHS7	P38843	316 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	AST2	P39945	430 aa	Known RBP	4.05	□□□□□ -1.76
MCM4	YPR019W	GPI2	P46961	280 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	PHO23	P50947	330 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	YNL033W	P53964	284 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	YNL019C	P53975	284 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	ADD37	Q03233	198 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	OCA6	Q12454	224 aa		4.05	□□□□□ -1.76
MCM4	YPR019W	PRM5	P40476	318 aa		4.04	□□□□□ -1.76
MCM4	YPR019W	RPS8A	P0CX39	200 aa	Known RBP	4.04	□□□□□ -1.76
MCM4	YPR019W	RPS8B	P0CX40	200 aa	Known RBP	4.04	□□□□□ -1.76
MCM4	YPR019W	IMP1	P28627	190 aa		4.04	□□□□□ -1.76
MCM4	YPR019W	SHB17	P36136	271 aa	Known RBP	4.04	□□□□□ -1.76
MCM4	YPR019W	YEL075C	P39972	122 aa		4.04	□□□□□ -1.76
MCM4	YPR019W	YER189W	P40104	122 aa		4.04	□□□□□ -1.76
MCM4	YPR019W	FSH2	Q05015	223 aa		4.04	□□□□□ -1.76
MCM4	YPR019W	DGK1	Q12382	290 aa		4.04	□□□□□ -1.76
MCM4	YPR019W	BNR1	P40450	1375 aa		4.04	□□□□□ -1.76
MCM4	YPR019W	SPT14	P32363	452 aa		4.03	□□□□□ -1.76
MCM4	YPR019W	MIX23	P38162	196 aa		4.03	□□□□□ -1.76
MCM4	YPR019W	YER181C	P40097	107 aa		4.03	□□□□□ -1.76
MCM4	YPR019W	YIL024C	P40543	189 aa		4.03	□□□□□ -1.76
MCM4	YPR019W	YJL213W	P40896	331 aa		4.03	□□□□□ -1.76
MCM4	YPR019W	YGL230C	P53074	147 aa		4.03	□□□□□ -1.76
MCM4	YPR019W	GRH1	Q04410	372 aa	Known RBP	4.03	□□□□□ -1.76
MCM4	YPR019W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
MCM4	YPR019W	YPL162C	Q12042	273 aa		4.03	□□□□□ -1.76
MCM4	YPR019W	YFR032C-B	Q8TGU2	87 aa		4.03	□□□□□ -1.76
MCM4	YPR019W	SAS5	Q99314	248 aa		4.03	□□□□□ -1.76
MCM4	YPR019W	YLR462W	O13556	202 aa		4.03	□□□□□ -1.76
MCM4	YPR019W	ANB1	P19211	157 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms