RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC11, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC11	YOR339C	PRP11	Q07350	266 aa	Predicted RBP	4.82	□□□□□ -1.64
UBC11	YOR339C	YCT1	Q12235	531 aa		4.82	□□□□□ -1.64
UBC11	YOR339C	ROX3	P25046	220 aa		4.81	□□□□□ -1.64
UBC11	YOR339C	YCR061W	P25639	631 aa		4.81	□□□□□ -1.64
UBC11	YOR339C	COQ2	P32378	372 aa		4.81	□□□□□ -1.64
UBC11	YOR339C	TCA17	P32613	152 aa		4.81	□□□□□ -1.64
UBC11	YOR339C	SUT1	P53032	299 aa	Known RBP	4.81	□□□□□ -1.64
UBC11	YOR339C	LPP1	Q04396	274 aa		4.81	□□□□□ -1.64
UBC11	YOR339C	ARR2	Q06597	130 aa		4.81	□□□□□ -1.64
UBC11	YOR339C	YOL029C	Q08187	201 aa		4.81	□□□□□ -1.64
UBC11	YOR339C	YGL194C-A	Q2V2P6	80 aa		4.81	□□□□□ -1.64
UBC11	YOR339C	YJR112W-A	Q3E743	109 aa		4.81	□□□□□ -1.64
UBC11	YOR339C	YOS1	Q3E834	85 aa		4.81	□□□□□ -1.64
UBC11	YOR339C	SEC22	P22214	214 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	MRS4	P23500	304 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	CBT1	P36038	271 aa	Predicted RBP	4.8	□□□□□ -1.64
UBC11	YOR339C	MIA40	P36046	403 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	ERV15	P38312	142 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	VMA22	P38784	181 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	YJR012C	P47087	207 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	YJR111C	P47148	283 aa	Known RBP	4.8	□□□□□ -1.64
UBC11	YOR339C	MRPL50	P53724	139 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	PLP1	Q04004	230 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	YPD1	Q07688	167 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	RRT7	Q07829	113 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	HRD1	Q08109	551 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	YPR071W	Q12346	211 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	YBR255C-A	Q3E776	120 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	BOL1	Q3E793	110 aa		4.8	□□□□□ -1.64
UBC11	YOR339C	STF2	P16965	84 aa		4.79	□□□□□ -1.64
UBC11	YOR339C	YMR31	P19955	123 aa		4.79	□□□□□ -1.64
UBC11	YOR339C	SPS18	P32572	300 aa		4.79	□□□□□ -1.64
UBC11	YOR339C	PMU1	P36069	295 aa		4.79	□□□□□ -1.64
UBC11	YOR339C	GEP4	P38812	185 aa		4.79	□□□□□ -1.64
UBC11	YOR339C	YJL118W	P47022	219 aa		4.79	□□□□□ -1.64
UBC11	YOR339C	YGR045C	P53229	120 aa		4.79	□□□□□ -1.64
UBC11	YOR339C	YMR317W	Q04893	1140 aa		4.79	□□□□□ -1.64
UBC11	YOR339C	ADH6	Q04894	360 aa	Known RBP	4.79	□□□□□ -1.64
UBC11	YOR339C	ATG5	Q12380	294 aa		4.79	□□□□□ -1.64
UBC11	YOR339C	RPL9A	P05738	191 aa	Known RBP	4.78	□□□□□ -1.64
UBC11	YOR339C	MAG1	P22134	296 aa	Known RBP	4.78	□□□□□ -1.64
UBC11	YOR339C	PDC2	P32896	925 aa		4.78	□□□□□ -1.64
UBC11	YOR339C	LSM12	P38828	187 aa	Known RBP	4.78	□□□□□ -1.64
UBC11	YOR339C	YHR138C	P38841	114 aa	Predicted RBP	4.78	□□□□□ -1.64
UBC11	YOR339C	TAD2	P47058	250 aa		4.78	□□□□□ -1.64
UBC11	YOR339C	ECM27	P47144	725 aa		4.78	□□□□□ -1.64
UBC11	YOR339C	GPI15	P53961	229 aa		4.78	□□□□□ -1.64
UBC11	YOR339C	MIX17	Q03667	156 aa		4.78	□□□□□ -1.64
UBC11	YOR339C	HOF1	Q05080	669 aa		4.78	□□□□□ -1.64
UBC11	YOR339C	PAM18	Q07914	168 aa		4.78	□□□□□ -1.64
UBC11	YOR339C	YNG1	Q08465	219 aa		4.78	□□□□□ -1.64
UBC11	YOR339C	ATO3	Q12359	275 aa		4.78	□□□□□ -1.64
UBC11	YOR339C	YLR146W-A	Q2V2P1	62 aa		4.78	□□□□□ -1.64
UBC11	YOR339C	YEA6	P39953	335 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	RPL13B	P40212	199 aa	Known RBP	4.77	□□□□□ -1.65
UBC11	YOR339C	RFC2	P40348	353 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	YJR056C	P47115	236 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	ARP3	P47117	449 aa	Known RBP	4.77	□□□□□ -1.65
UBC11	YOR339C	RPL9B	P51401	191 aa	Known RBP	4.77	□□□□□ -1.65
UBC11	YOR339C	PKP2	P53170	491 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	PNC1	P53184	216 aa	Known RBP	4.77	□□□□□ -1.65
UBC11	YOR339C	JAC1	P53193	184 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	MSO1	P53604	210 aa	Known RBP	4.77	□□□□□ -1.65
UBC11	YOR339C	YIF1	P53845	314 aa	Known RBP	4.77	□□□□□ -1.65
UBC11	YOR339C	YNL234W	P53857	426 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	ACT1	P60010	375 aa	Known RBP	4.77	□□□□□ -1.65
UBC11	YOR339C	FSH2	Q05015	223 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	COA4	Q05809	96 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	TMA10	Q06177	86 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	AEP3	Q12089	606 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	FCY1	Q12178	158 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	RPL13A	Q12690	199 aa	Predicted RBP	4.77	□□□□□ -1.65
UBC11	YOR339C	YBR298C-A	Q8TGK4	73 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	ISN1	Q99312	450 aa		4.77	□□□□□ -1.65
UBC11	YOR339C	YER145C-A	A0A023PYF4	145 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	VPS63	O13549	108 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	BGL2	P15703	313 aa	Known RBP	4.76	□□□□□ -1.65
UBC11	YOR339C	ERV1	P27882	189 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	RPB9	P27999	122 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	YKL162C	P36052	402 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	PHM8	P40025	321 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	PIC2	P40035	300 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	AGX1	P43567	385 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	YGR151C	P53287	111 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	CRH1	P53301	507 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	DID2	P69771	204 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	STD1	Q02794	444 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	ERP1	Q05359	219 aa	Known RBP	4.76	□□□□□ -1.65
UBC11	YOR339C	ANT1	Q06497	328 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	RRP15	Q06511	250 aa	Predicted RBP	4.76	□□□□□ -1.65
UBC11	YOR339C	COA2	Q3E823	68 aa		4.76	□□□□□ -1.65
UBC11	YOR339C	ADE8	P04161	214 aa		4.75	□□□□□ -1.65
UBC11	YOR339C	HEM13	P11353	328 aa	Known RBP	4.75	□□□□□ -1.65
UBC11	YOR339C	SRY1	P36007	326 aa		4.75	□□□□□ -1.65
UBC11	YOR339C	SWM2	P40342	146 aa		4.75	□□□□□ -1.65
UBC11	YOR339C	YGR050C	P53231	118 aa		4.75	□□□□□ -1.65
UBC11	YOR339C	EST3	Q03096	181 aa		4.75	□□□□□ -1.65
UBC11	YOR339C	YOR097C	Q12274	175 aa	Predicted RBP	4.75	□□□□□ -1.65
UBC11	YOR339C	AIM45	Q12480	344 aa	Known RBP	4.75	□□□□□ -1.65
UBC11	YOR339C	URA5	P13298	226 aa	Known RBP	4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms