RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C PRX1P34227 261 aaKnown RBP1.03□□□□□ -2.24
SWT1YOR166C RFC4P40339 323 aaKnown RBP1.03□□□□□ -2.24
SWT1YOR166C TMA22P47089 198 aaPredicted RBP1.03□□□□□ -2.24
SWT1YOR166C LSM7P53905 115 aaKnown RBP1.03□□□□□ -2.24
SWT1YOR166C YMR007WQ03675 126 aa1.03□□□□□ -2.24
SWT1YOR166C TRM12Q04235 462 aa1.03□□□□□ -2.24
SWT1YOR166C FSF1Q12029 327 aaKnown RBP1.03□□□□□ -2.24
SWT1YOR166C YHR214C-EQ8TGK0 99 aa1.03□□□□□ -2.24
SWT1YOR166C YHR139C-AO13536 103 aa1.02□□□□□ -2.25
SWT1YOR166C HTB1P02293 131 aaKnown RBP1.02□□□□□ -2.25
SWT1YOR166C HTB2P02294 131 aa1.02□□□□□ -2.25
SWT1YOR166C CDC36P06100 191 aaPredicted RBP1.02□□□□□ -2.25
SWT1YOR166C MER1P16523 270 aa1.02□□□□□ -2.25
SWT1YOR166C YPK2P18961 677 aa1.02□□□□□ -2.25
SWT1YOR166C OPY1P38271 328 aa1.02□□□□□ -2.25
SWT1YOR166C IKI1P38874 309 aa1.02□□□□□ -2.25
SWT1YOR166C RIO2P40160 425 aaKnown RBP1.02□□□□□ -2.25
SWT1YOR166C AIM25P47140 327 aa1.02□□□□□ -2.25
SWT1YOR166C DOC1P53068 250 aa1.02□□□□□ -2.25
SWT1YOR166C YNR077CP53758 84 aa1.02□□□□□ -2.25
SWT1YOR166C NUP49Q02199 472 aa1.02□□□□□ -2.25
SWT1YOR166C YLR162WQ06235 118 aa1.02□□□□□ -2.25
SWT1YOR166C RAD28Q12021 506 aa1.02□□□□□ -2.25
SWT1YOR166C RPB3P16370 318 aaKnown RBP1.01□□□□□ -2.25
SWT1YOR166C SRY1P36007 326 aa1.01□□□□□ -2.25
SWT1YOR166C YCR087C-AP37263 153 aa1.01□□□□□ -2.25
SWT1YOR166C MGA1P53050 456 aa1.01□□□□□ -2.25
SWT1YOR166C YKL183C-AQ3E765 70 aa1.01□□□□□ -2.25
SWT1YOR166C YLR236CA0A023PZG4 107 aa1□□□□□ -2.25
SWT1YOR166C SIR2P06700 562 aa1□□□□□ -2.25
SWT1YOR166C RPL27AP0C2H6 136 aaKnown RBP1□□□□□ -2.25
SWT1YOR166C CBF1P17106 351 aa1□□□□□ -2.25
SWT1YOR166C CAF4P36130 643 aa1□□□□□ -2.25
SWT1YOR166C EDC3P39998 551 aaKnown RBP1□□□□□ -2.25
SWT1YOR166C YRB2P40517 327 aa1□□□□□ -2.25
SWT1YOR166C KNH1P50112 268 aa1□□□□□ -2.25
SWT1YOR166C COG5P53951 403 aa1□□□□□ -2.25
SWT1YOR166C RNH1Q04740 348 aa1□□□□□ -2.25
SWT1YOR166C DYN3Q04949 312 aa1□□□□□ -2.25
SWT1YOR166C YLR031WQ07978 186 aa1□□□□□ -2.25
SWT1YOR166C MCP1Q12106 302 aa1□□□□□ -2.25
SWT1YOR166C YNL146C-AQ3E7Z1 64 aa1□□□□□ -2.25
SWT1YOR166C YFR032C-BQ8TGU2 87 aa1□□□□□ -2.25
SWT1YOR166C CDC33P07260 213 aaKnown RBP0.99□□□□□ -2.25
SWT1YOR166C RPS24AP0CX31 135 aaKnown RBP0.99□□□□□ -2.25
SWT1YOR166C RPS24BP0CX32 135 aaKnown RBP0.99□□□□□ -2.25
SWT1YOR166C RPL2AP0CX45 254 aaKnown RBP0.99□□□□□ -2.25
SWT1YOR166C RPL2BP0CX46 254 aaKnown RBP0.99□□□□□ -2.25
SWT1YOR166C SPS18P32572 300 aa0.99□□□□□ -2.25
SWT1YOR166C ARP3P47117 449 aaKnown RBP0.99□□□□□ -2.25
SWT1YOR166C ARO8P53090 500 aaKnown RBP0.99□□□□□ -2.25
SWT1YOR166C MMS2P53152 137 aa0.99□□□□□ -2.25
SWT1YOR166C YGR050CP53231 118 aa0.99□□□□□ -2.25
SWT1YOR166C RTC4P53850 401 aa0.99□□□□□ -2.25
SWT1YOR166C YDR249CQ03787 373 aa0.99□□□□□ -2.25
SWT1YOR166C YPR014CQ6B0W2 109 aa0.99□□□□□ -2.25
SWT1YOR166C ODC2Q99297 307 aa0.99□□□□□ -2.25
SWT1YOR166C YIL177CP40434 1758 aa0.99□□□□□ -2.25
SWT1YOR166C YJL225CP40889 1758 aa0.99□□□□□ -2.25
SWT1YOR166C MATALPHA2P0CY08 210 aa0.98□□□□□ -2.25
SWT1YOR166C HMLALPHA2P0CY09 210 aa0.98□□□□□ -2.25
SWT1YOR166C RTC3P38804 111 aaPredicted RBP0.98□□□□□ -2.25
SWT1YOR166C YER134CP40081 178 aa0.98□□□□□ -2.25
SWT1YOR166C CWC23P52868 283 aaPredicted RBP0.98□□□□□ -2.25
SWT1YOR166C POP3P53833 195 aaPredicted RBP0.98□□□□□ -2.25
SWT1YOR166C YOL160WQ08321 113 aa0.98□□□□□ -2.25
SWT1YOR166C DGA1Q08650 418 aa0.98□□□□□ -2.25
SWT1YOR166C SNF4P12904 322 aa0.97□□□□□ -2.25
SWT1YOR166C STP22P25604 385 aa0.97□□□□□ -2.25
SWT1YOR166C TCA17P32613 152 aa0.97□□□□□ -2.25
SWT1YOR166C PAN3P36102 679 aaPredicted RBP0.97□□□□□ -2.25
SWT1YOR166C UTP30P36144 274 aaKnown RBP0.97□□□□□ -2.25
SWT1YOR166C UBC7Q02159 165 aa0.97□□□□□ -2.25
SWT1YOR166C SHH3Q04487 196 aa0.97□□□□□ -2.25
SWT1YOR166C GET4Q12125 312 aa0.97□□□□□ -2.25
SWT1YOR166C GIS3Q12418 502 aa0.97□□□□□ -2.25
SWT1YOR166C YPL229WQ99395 206 aa0.97□□□□□ -2.25
SWT1YOR166C IGO2Q9P305 131 aa0.97□□□□□ -2.25
SWT1YOR166C MSB2P32334 1306 aa0.97□□□□□ -2.25
SWT1YOR166C PDR18P53756 1333 aa0.97□□□□□ -2.25
SWT1YOR166C NSP1P14907 823 aaKnown RBP0.96□□□□□ -2.26
SWT1YOR166C SEC11P15367 167 aa0.96□□□□□ -2.26
SWT1YOR166C UPS2P35200 230 aa0.96□□□□□ -2.26
SWT1YOR166C YKT6P36015 200 aaKnown RBP0.96□□□□□ -2.26
SWT1YOR166C MTW1P39731 289 aa0.96□□□□□ -2.26
SWT1YOR166C PDS1P40316 373 aaPredicted RBP0.96□□□□□ -2.26
SWT1YOR166C YPL073CP40323 161 aa0.96□□□□□ -2.26
SWT1YOR166C CUP9P41817 306 aa0.96□□□□□ -2.26
SWT1YOR166C YDL085C-AQ3E7B7 68 aaKnown RBP0.96□□□□□ -2.26
SWT1YOR166C YDR157WA0A023PZE8 133 aa0.96□□□□□ -2.26
SWT1YOR166C MBF1O14467 151 aaKnown RBP0.96□□□□□ -2.26
SWT1YOR166C TRX3P25372 127 aa0.96□□□□□ -2.26
SWT1YOR166C SEC17P32602 292 aa0.96□□□□□ -2.26
SWT1YOR166C SFK1P35735 353 aa0.96□□□□□ -2.26
SWT1YOR166C KDX1P36005 433 aa0.96□□□□□ -2.26
SWT1YOR166C SOK1P40317 901 aa0.96□□□□□ -2.26
SWT1YOR166C MPA43P53583 542 aaPredicted RBP0.96□□□□□ -2.26
SWT1YOR166C ABP140Q08641 628 aaKnown RBP0.96□□□□□ -2.26
SWT1YOR166C YML100W-AQ8TGT0 57 aa0.96□□□□□ -2.26
SWT1YOR166C VAR1P02381 398 aa0.95□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms