RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	ALG14	P38242	237 aa		11.99	□□□□□ -0.49
SHR5	YOL110W	YJR111C	P47148	283 aa	Known RBP	11.99	□□□□□ -0.49
SHR5	YOL110W	DID2	P69771	204 aa		11.99	□□□□□ -0.49
SHR5	YOL110W	ARR2	Q06597	130 aa		11.99	□□□□□ -0.49
SHR5	YOL110W	YMR31	P19955	123 aa		11.98	□□□□□ -0.49
SHR5	YOL110W	YHR138C	P38841	114 aa	Predicted RBP	11.98	□□□□□ -0.49
SHR5	YOL110W	YFL015C	P43578	164 aa		11.98	□□□□□ -0.49
SHR5	YOL110W	YOS1	Q3E834	85 aa		11.98	□□□□□ -0.49
SHR5	YOL110W	RPL9A	P05738	191 aa	Known RBP	11.97	□□□□□ -0.49
SHR5	YOL110W	YCL042W	P25572	119 aa		11.97	□□□□□ -0.49
SHR5	YOL110W	TAD2	P47058	250 aa		11.97	□□□□□ -0.49
SHR5	YOL110W	MSO1	P53604	210 aa	Known RBP	11.97	□□□□□ -0.49
SHR5	YOL110W	ANT1	Q06497	328 aa		11.97	□□□□□ -0.49
SHR5	YOL110W	YBR298C-A	Q8TGK4	73 aa		11.97	□□□□□ -0.49
SHR5	YOL110W	ADH5	P38113	351 aa	Known RBP	11.96	□□□□□ -0.49
SHR5	YOL110W	GZF3	P42944	551 aa	Known RBP	11.96	□□□□□ -0.49
SHR5	YOL110W	RPL9B	P51401	191 aa	Known RBP	11.96	□□□□□ -0.49
SHR5	YOL110W	YIF1	P53845	314 aa	Known RBP	11.96	□□□□□ -0.49
SHR5	YOL110W	YDR415C	Q04033	374 aa	Predicted RBP	11.96	□□□□□ -0.49
SHR5	YOL110W	ERP1	Q05359	219 aa	Known RBP	11.96	□□□□□ -0.49
SHR5	YOL110W	ATG5	Q12380	294 aa		11.96	□□□□□ -0.49
SHR5	YOL110W	CBT1	P36038	271 aa	Predicted RBP	11.95	□□□□□ -0.5
SHR5	YOL110W	YJL118W	P47022	219 aa		11.95	□□□□□ -0.5
SHR5	YOL110W	SUT1	P53032	299 aa	Known RBP	11.95	□□□□□ -0.5
SHR5	YOL110W	HED1	Q03937	162 aa		11.95	□□□□□ -0.5
SHR5	YOL110W	SPS18	P32572	300 aa		11.94	□□□□□ -0.5
SHR5	YOL110W	PMU1	P36069	295 aa		11.94	□□□□□ -0.5
SHR5	YOL110W	YEA6	P39953	335 aa		11.94	□□□□□ -0.5
SHR5	YOL110W	FCF2	Q12035	217 aa	Predicted RBP	11.94	□□□□□ -0.5
SHR5	YOL110W	AIM45	Q12480	344 aa	Known RBP	11.94	□□□□□ -0.5
SHR5	YOL110W	VPS63	O13549	108 aa		11.93	□□□□□ -0.5
SHR5	YOL110W	ERV1	P27882	189 aa		11.93	□□□□□ -0.5
SHR5	YOL110W	VMA11	P32842	164 aa		11.93	□□□□□ -0.5
SHR5	YOL110W	SRY1	P36007	326 aa		11.93	□□□□□ -0.5
SHR5	YOL110W	ATG31	Q12421	196 aa		11.93	□□□□□ -0.5
SHR5	YOL110W	YBR255C-A	Q3E776	120 aa		11.93	□□□□□ -0.5
SHR5	YOL110W	YKL162C	P36052	402 aa		11.92	□□□□□ -0.5
SHR5	YOL110W	AGX1	P43567	385 aa		11.92	□□□□□ -0.5
SHR5	YOL110W	PUS4	P48567	403 aa	Known RBP	11.92	□□□□□ -0.5
SHR5	YOL110W	YGL117W	P53133	265 aa		11.92	□□□□□ -0.5
SHR5	YOL110W	YGR045C	P53229	120 aa		11.92	□□□□□ -0.5
SHR5	YOL110W	YMR090W	Q04304	227 aa	Known RBP	11.92	□□□□□ -0.5
SHR5	YOL110W	ADH6	Q04894	360 aa	Known RBP	11.92	□□□□□ -0.5
SHR5	YOL110W	FSH2	Q05015	223 aa		11.92	□□□□□ -0.5
SHR5	YOL110W	MRS4	P23500	304 aa		11.91	□□□□□ -0.5
SHR5	YOL110W	RFC2	P40348	353 aa		11.91	□□□□□ -0.5
SHR5	YOL110W	SNX4	P47057	423 aa		11.91	□□□□□ -0.5
SHR5	YOL110W	YPR071W	Q12346	211 aa		11.91	□□□□□ -0.5
SHR5	YOL110W	ASP1	P38986	381 aa	Predicted RBP	11.9	□□□□□ -0.5
SHR5	YOL110W	GCV3	P39726	170 aa	Predicted RBP	11.9	□□□□□ -0.5
SHR5	YOL110W	HOF1	Q05080	669 aa		11.9	□□□□□ -0.5
SHR5	YOL110W	HBN1	Q96VH4	193 aa		11.9	□□□□□ -0.5
SHR5	YOL110W	BGL2	P15703	313 aa	Known RBP	11.89	□□□□□ -0.51
SHR5	YOL110W	AIR1	P40507	360 aa	Known RBP	11.89	□□□□□ -0.51
SHR5	YOL110W	YJR056C	P47115	236 aa		11.89	□□□□□ -0.51
SHR5	YOL110W	ARP3	P47117	449 aa	Known RBP	11.89	□□□□□ -0.51
SHR5	YOL110W	SRB7	P47822	140 aa		11.89	□□□□□ -0.51
SHR5	YOL110W	BER1	Q06688	274 aa	Known RBP	11.89	□□□□□ -0.51
SHR5	YOL110W	AEP3	Q12089	606 aa		11.89	□□□□□ -0.51
SHR5	YOL110W	FMP16	Q12497	93 aa		11.89	□□□□□ -0.51
SHR5	YOL110W	HEM13	P11353	328 aa	Known RBP	11.88	□□□□□ -0.51
SHR5	YOL110W	ECM31	P38122	312 aa		11.88	□□□□□ -0.51
SHR5	YOL110W	SLM6	P38343	150 aa		11.88	□□□□□ -0.51
SHR5	YOL110W	VMA7	P39111	118 aa		11.88	□□□□□ -0.51
SHR5	YOL110W	ORM1	P53224	222 aa		11.88	□□□□□ -0.51
SHR5	YOL110W	TIM44	Q01852	431 aa		11.88	□□□□□ -0.51
SHR5	YOL110W	MIX17	Q03667	156 aa		11.88	□□□□□ -0.51
SHR5	YOL110W	COA2	Q3E823	68 aa		11.88	□□□□□ -0.51
SHR5	YOL110W	URA2	P07259	2214 aa	Known RBP	11.88	□□□□□ -0.51
SHR5	YOL110W	DBP2	P24783	546 aa	Known RBP	11.87	□□□□□ -0.51
SHR5	YOL110W	NOP16	P40007	231 aa	Known RBP	11.87	□□□□□ -0.51
SHR5	YOL110W	YIP1	P53039	248 aa		11.87	□□□□□ -0.51
SHR5	YOL110W	EST3	Q03096	181 aa		11.87	□□□□□ -0.51
SHR5	YOL110W	RRP15	Q06511	250 aa	Predicted RBP	11.87	□□□□□ -0.51
SHR5	YOL110W	RPD3	P32561	433 aa		11.86	□□□□□ -0.51
SHR5	YOL110W	MIA40	P36046	403 aa		11.86	□□□□□ -0.51
SHR5	YOL110W	LSM4	P40070	187 aa	Known RBP	11.86	□□□□□ -0.51
SHR5	YOL110W	YGR050C	P53231	118 aa		11.86	□□□□□ -0.51
SHR5	YOL110W	YPL264C	Q08980	353 aa		11.86	□□□□□ -0.51
SHR5	YOL110W	UBI4	P0CG63	381 aa	Known RBP	11.85	□□□□□ -0.51
SHR5	YOL110W	RTC3	P38804	111 aa	Predicted RBP	11.85	□□□□□ -0.51
SHR5	YOL110W	APJ1	P53940	528 aa		11.85	□□□□□ -0.51
SHR5	YOL110W	YMR082C	Q04276	118 aa		11.85	□□□□□ -0.51
SHR5	YOL110W	YHR213W-A	Q8TGT4	77 aa		11.85	□□□□□ -0.51
SHR5	YOL110W	EMP24	P32803	203 aa	Known RBP	11.84	□□□□□ -0.51
SHR5	YOL110W	ATP3	P38077	311 aa	Known RBP	11.84	□□□□□ -0.51
SHR5	YOL110W	YEA4	P40004	342 aa		11.84	□□□□□ -0.51
SHR5	YOL110W	SYG1	P40528	902 aa		11.84	□□□□□ -0.51
SHR5	YOL110W	BNA1	P47096	177 aa		11.84	□□□□□ -0.51
SHR5	YOL110W	BUL1	P48524	976 aa		11.84	□□□□□ -0.51
SHR5	YOL110W	PDR17	P53844	350 aa		11.84	□□□□□ -0.51
SHR5	YOL110W	STD1	Q02794	444 aa		11.84	□□□□□ -0.51
SHR5	YOL110W	YMR317W	Q04893	1140 aa		11.84	□□□□□ -0.51
SHR5	YOL110W	ATO3	Q12359	275 aa		11.84	□□□□□ -0.51
SHR5	YOL110W	AGC1	Q12482	902 aa		11.84	□□□□□ -0.51
SHR5	YOL110W	YGL258W-A	Q3E740	77 aa		11.84	□□□□□ -0.51
SHR5	YOL110W	YBR085C-A	O43137	85 aa		11.83	□□□□□ -0.52
SHR5	YOL110W	ADE8	P04161	214 aa		11.83	□□□□□ -0.52
SHR5	YOL110W	URA5	P13298	226 aa	Known RBP	11.83	□□□□□ -0.52
SHR5	YOL110W	PHO85	P17157	305 aa		11.83	□□□□□ -0.52

Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms