RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W AXL2P38928 823 aa2.08□□□□□ -2.08
UBP15YMR304W YGR219WP53307 113 aa2.08□□□□□ -2.08
UBP15YMR304W YNL046WP53956 172 aa2.08□□□□□ -2.08
UBP15YMR304W FCF1Q05498 189 aaPredicted RBP2.08□□□□□ -2.08
UBP15YMR304W YDL218WQ07629 317 aa2.08□□□□□ -2.08
UBP15YMR304W RKM5Q12367 367 aa2.08□□□□□ -2.08
UBP15YMR304W PRE2P30656 287 aaKnown RBP2.07□□□□□ -2.08
UBP15YMR304W ERG3P32353 365 aa2.07□□□□□ -2.08
UBP15YMR304W DOG2P38773 246 aa2.07□□□□□ -2.08
UBP15YMR304W GAT2P40209 560 aa2.07□□□□□ -2.08
UBP15YMR304W YIL169CP40442 995 aa2.07□□□□□ -2.08
UBP15YMR304W GLC8P41818 229 aa2.07□□□□□ -2.08
UBP15YMR304W YNR066CP53752 436 aa2.07□□□□□ -2.08
UBP15YMR304W NUP53Q03790 475 aa2.07□□□□□ -2.08
UBP15YMR304W ATG10Q07879 167 aa2.07□□□□□ -2.08
UBP15YMR304W YKR104WP0CE69 306 aa2.07□□□□□ -2.08
UBP15YMR304W RPL20AP0CX23 172 aaKnown RBP2.07□□□□□ -2.08
UBP15YMR304W RPL20BP0CX24 172 aaPredicted RBP2.07□□□□□ -2.08
UBP15YMR304W GPI12P23797 304 aa2.07□□□□□ -2.08
UBP15YMR304W MRPL4P36517 319 aa2.07□□□□□ -2.08
UBP15YMR304W YIL054WP40524 105 aa2.07□□□□□ -2.08
UBP15YMR304W ARP3P47117 449 aaKnown RBP2.07□□□□□ -2.08
UBP15YMR304W PDR16P53860 351 aaKnown RBP2.07□□□□□ -2.08
UBP15YMR304W ARG5,6Q01217 863 aa2.07□□□□□ -2.08
UBP15YMR304W RPL6AQ02326 176 aaKnown RBP2.07□□□□□ -2.08
UBP15YMR304W CAB5Q03941 241 aa2.07□□□□□ -2.08
UBP15YMR304W GRH1Q04410 372 aaKnown RBP2.07□□□□□ -2.08
UBP15YMR304W HRI1Q05905 244 aaKnown RBP2.07□□□□□ -2.08
UBP15YMR304W USV1Q12132 391 aa2.07□□□□□ -2.08
UBP15YMR304W YDR246W-AQ3E763 66 aa2.07□□□□□ -2.08
UBP15YMR304W THP2O13539 261 aaKnown RBP2.07□□□□□ -2.08
UBP15YMR304W TAD2P47058 250 aa2.07□□□□□ -2.08
UBP15YMR304W YGR018CP53211 109 aa2.07□□□□□ -2.08
UBP15YMR304W ERG13P54839 491 aaKnown RBP2.07□□□□□ -2.08
UBP15YMR304W ADH6Q04894 360 aaKnown RBP2.07□□□□□ -2.08
UBP15YMR304W NOC4Q06512 552 aaPredicted RBP2.07□□□□□ -2.08
UBP15YMR304W PFA4Q12006 378 aa2.07□□□□□ -2.08
UBP15YMR304W YDL211CQ12121 372 aa2.07□□□□□ -2.08
UBP15YMR304W MHT1Q12525 324 aa2.07□□□□□ -2.08
UBP15YMR304W YGL194C-AQ2V2P6 80 aa2.07□□□□□ -2.08
UBP15YMR304W SOD2P00447 233 aa2.06□□□□□ -2.08
UBP15YMR304W AAC1P04710 309 aa2.06□□□□□ -2.08
UBP15YMR304W FEN2P25621 512 aaKnown RBP2.06□□□□□ -2.08
UBP15YMR304W YBR184WP38299 523 aa2.06□□□□□ -2.08
UBP15YMR304W FSH1P38777 243 aaKnown RBP2.06□□□□□ -2.08
UBP15YMR304W ARO9P38840 513 aaPredicted RBP2.06□□□□□ -2.08
UBP15YMR304W YEL028WP39989 153 aa2.06□□□□□ -2.08
UBP15YMR304W RPL13BP40212 199 aaKnown RBP2.06□□□□□ -2.08
UBP15YMR304W YFL054CP43549 646 aa2.06□□□□□ -2.08
UBP15YMR304W CIN2P46670 268 aa2.06□□□□□ -2.08
UBP15YMR304W YMR226CQ05016 267 aaKnown RBP2.06□□□□□ -2.08
UBP15YMR304W ACM1Q08981 209 aa2.06□□□□□ -2.08
UBP15YMR304W YOR338WQ99326 363 aa2.06□□□□□ -2.08
UBP15YMR304W YLL053CP0CD98 152 aa2.06□□□□□ -2.08
UBP15YMR304W YHR213WP0CI67 198 aa2.06□□□□□ -2.08
UBP15YMR304W ACB1P31787 87 aa2.06□□□□□ -2.08
UBP15YMR304W PAD1P33751 242 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
UBP15YMR304W SOR1P35497 357 aaKnown RBP2.06□□□□□ -2.08
UBP15YMR304W ALK1P43633 760 aaKnown RBP2.06□□□□□ -2.08
UBP15YMR304W RPA43P46669 326 aa2.06□□□□□ -2.08
UBP15YMR304W RPS10BP46784 105 aaKnown RBP2.06□□□□□ -2.08
UBP15YMR304W MUP1P50276 574 aa2.06□□□□□ -2.08
UBP15YMR304W BRP1P53194 125 aa2.06□□□□□ -2.08
UBP15YMR304W MSO1P53604 210 aaKnown RBP2.06□□□□□ -2.08
UBP15YMR304W GMC1Q04399 608 aa2.06□□□□□ -2.08
UBP15YMR304W HSP31Q04432 237 aa2.06□□□□□ -2.08
UBP15YMR304W SOR2Q07786 357 aa2.06□□□□□ -2.08
UBP15YMR304W RPS10AQ08745 105 aaPredicted RBP2.06□□□□□ -2.08
UBP15YMR304W JID1Q12350 301 aa2.06□□□□□ -2.08
UBP15YMR304W GLC7P32598 312 aaKnown RBP2.06□□□□□ -2.08
UBP15YMR304W MRPS9P38120 278 aa2.06□□□□□ -2.08
UBP15YMR304W LYS1P38998 373 aaRIP-Chip data2.06□□□□□ -2.08not detected
UBP15YMR304W TIM13P53299 105 aa2.06□□□□□ -2.08
UBP15YMR304W SNP1Q00916 300 aaPredicted RBP2.06□□□□□ -2.08
UBP15YMR304W UGO1Q03327 502 aa2.06□□□□□ -2.08
UBP15YMR304W FDH1Q08911 376 aa2.06□□□□□ -2.08
UBP15YMR304W COX1P00401 534 aa2.05□□□□□ -2.08
UBP15YMR304W YCR007CP25354 239 aa2.05□□□□□ -2.08
UBP15YMR304W SRP21P32342 167 aa2.05□□□□□ -2.08
UBP15YMR304W MUD1P32605 298 aaKnown RBP2.05□□□□□ -2.08
UBP15YMR304W SSS1P35179 80 aa2.05□□□□□ -2.08
UBP15YMR304W EMC3P36039 253 aa2.05□□□□□ -2.08
UBP15YMR304W SHE2P36068 246 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
UBP15YMR304W GAT4P40569 121 aa2.05□□□□□ -2.08
UBP15YMR304W VMA21P41806 77 aa2.05□□□□□ -2.08
UBP15YMR304W EFM3P47163 339 aa2.05□□□□□ -2.08
UBP15YMR304W MGA1P53050 456 aa2.05□□□□□ -2.08
UBP15YMR304W YGL193CP53097 103 aa2.05□□□□□ -2.08
UBP15YMR304W MTM1P53320 366 aa2.05□□□□□ -2.08
UBP15YMR304W MRPL51Q06090 140 aaPredicted RBP2.05□□□□□ -2.08
UBP15YMR304W PAM18Q07914 168 aa2.05□□□□□ -2.08
UBP15YMR304W YOL159CQ08300 171 aa2.05□□□□□ -2.08
UBP15YMR304W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
UBP15YMR304W YOL114CQ12322 202 aa2.05□□□□□ -2.08
UBP15YMR304W IZH4Q99393 312 aa2.05□□□□□ -2.08
UBP15YMR304W RAD52P06778 471 aaKnown RBP2.05□□□□□ -2.08
UBP15YMR304W KTI12P34253 313 aaKnown RBP2.05□□□□□ -2.08
UBP15YMR304W PAU16P35994 123 aa2.05□□□□□ -2.08
UBP15YMR304W RPS20P38701 121 aaKnown RBP2.05□□□□□ -2.08
UBP15YMR304W FLX1P40464 311 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 193.3 ms