RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C YGL235WP53071 178 aa2.92□□□□□ -1.94
CUS1YMR240C CGI121Q03705 181 aaKnown RBP2.92□□□□□ -1.94
CUS1YMR240C NOC4Q06512 552 aaPredicted RBP2.92□□□□□ -1.94
CUS1YMR240C TY2B-BQ12491 1770 aa2.91□□□□□ -1.94
CUS1YMR240C CDC8P00572 216 aa2.91□□□□□ -1.94
CUS1YMR240C TAH1P25638 111 aaPredicted RBP2.91□□□□□ -1.94
CUS1YMR240C MGT1P26188 188 aa2.91□□□□□ -1.94
CUS1YMR240C YOR062CP36025 268 aa2.91□□□□□ -1.94
CUS1YMR240C GIM4P40005 111 aaKnown RBP2.91□□□□□ -1.94
CUS1YMR240C MNN5P46982 586 aa2.91□□□□□ -1.94
CUS1YMR240C SBH2P52871 88 aa2.91□□□□□ -1.94
CUS1YMR240C RGM1Q00453 211 aa2.91□□□□□ -1.94
CUS1YMR240C YLR036CQ07986 203 aa2.91□□□□□ -1.94
CUS1YMR240C ATG2P53855 1592 aa2.91□□□□□ -1.94
CUS1YMR240C MYO2P19524 1574 aaKnown RBP2.9□□□□□ -1.95
CUS1YMR240C REP2P03872 296 aa2.9□□□□□ -1.95
CUS1YMR240C DER1P38307 211 aa2.9□□□□□ -1.95
CUS1YMR240C YAP3P38749 330 aa2.9□□□□□ -1.95
CUS1YMR240C GRX8Q05926 109 aa2.9□□□□□ -1.95
CUS1YMR240C YLR053CQ12026 108 aa2.9□□□□□ -1.95
CUS1YMR240C YOR283WQ12040 230 aaKnown RBP2.9□□□□□ -1.95
CUS1YMR240C YLR050CQ12155 161 aaKnown RBP2.9□□□□□ -1.95
CUS1YMR240C MDM32Q12171 622 aa2.9□□□□□ -1.95
CUS1YMR240C YDL085C-AQ3E7B7 68 aaKnown RBP2.9□□□□□ -1.95
CUS1YMR240C TDA8Q6B2U8 126 aa2.9□□□□□ -1.95
CUS1YMR240C TY1B-HO13535 1793 aa2.9□□□□□ -1.95
CUS1YMR240C TY1B-DR5P0C2I2 1755 aa2.9□□□□□ -1.95
CUS1YMR240C TY1B-DR6P0C2I3 1755 aa2.9□□□□□ -1.95
CUS1YMR240C TY1B-LR2P0C2I5 1755 aa2.9□□□□□ -1.95
CUS1YMR240C TY1B-LR3P0C2I6 1755 aaKnown RBP2.9□□□□□ -1.95
CUS1YMR240C TY1B-PR1P0C2I9 1755 aaKnown RBP2.9□□□□□ -1.95
CUS1YMR240C TY1B-PR2P0C2J0 1756 aa2.9□□□□□ -1.95
CUS1YMR240C TY1B-PR3P0C2J1 1755 aaKnown RBP2.9□□□□□ -1.95
CUS1YMR240C TY1B-JR1P47098 1755 aa2.9□□□□□ -1.95
CUS1YMR240C TY1B-ML2Q03434 1755 aaKnown RBP2.9□□□□□ -1.95
CUS1YMR240C TY1B-ER1Q03612 1755 aa2.9□□□□□ -1.95
CUS1YMR240C TY1B-ML1Q04711 1755 aaKnown RBP2.9□□□□□ -1.95
CUS1YMR240C TY1B-GR2Q12269 1755 aa2.9□□□□□ -1.95
CUS1YMR240C TY1B-OLQ12273 1755 aa2.9□□□□□ -1.95
CUS1YMR240C TY1B-PLQ12414 1755 aaKnown RBP2.9□□□□□ -1.95
CUS1YMR240C TY1B-BRQ12193 1756 aa2.89□□□□□ -1.95
CUS1YMR240C TY1B-GR3Q12316 1755 aa2.89□□□□□ -1.95
CUS1YMR240C TY1B-ORQ92393 1755 aa2.89□□□□□ -1.95
CUS1YMR240C CDC7P06243 507 aa2.89□□□□□ -1.95
CUS1YMR240C TRX3P25372 127 aa2.89□□□□□ -1.95
CUS1YMR240C PDS1P40316 373 aaPredicted RBP2.89□□□□□ -1.95
CUS1YMR240C YFH7P43591 353 aa2.89□□□□□ -1.95
CUS1YMR240C PET191Q02772 108 aa2.89□□□□□ -1.95
CUS1YMR240C TRM12Q04235 462 aa2.89□□□□□ -1.95
CUS1YMR240C NEJ1Q06148 342 aa2.89□□□□□ -1.95
CUS1YMR240C NSL1Q12143 216 aa2.89□□□□□ -1.95
CUS1YMR240C PET20Q99373 253 aa2.89□□□□□ -1.95
CUS1YMR240C KOG1P38873 1557 aa2.88□□□□□ -1.95
CUS1YMR240C NUF2P33895 451 aa2.88□□□□□ -1.95
CUS1YMR240C JAC1P53193 184 aa2.88□□□□□ -1.95
CUS1YMR240C YGR050CP53231 118 aa2.88□□□□□ -1.95
CUS1YMR240C YGR219WP53307 113 aa2.88□□□□□ -1.95
CUS1YMR240C LSM7P53905 115 aaKnown RBP2.88□□□□□ -1.95
CUS1YMR240C DAD3P69850 94 aa2.88□□□□□ -1.95
CUS1YMR240C NUP49Q02199 472 aa2.88□□□□□ -1.95
CUS1YMR240C MLP2P40457 1679 aa2.87□□□□□ -1.95
CUS1YMR240C MDH3P32419 343 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
CUS1YMR240C SEC17P32602 292 aa2.87□□□□□ -1.95
CUS1YMR240C YHR180WP38868 163 aa2.87□□□□□ -1.95
CUS1YMR240C RMD6P39975 231 aa2.87□□□□□ -1.95
CUS1YMR240C ICE2P40499 491 aa2.87□□□□□ -1.95
CUS1YMR240C PRM10P42946 383 aa2.87□□□□□ -1.95
CUS1YMR240C YGR042WP53227 271 aa2.87□□□□□ -1.95
CUS1YMR240C NQM1P53228 333 aaPredicted RBP2.87□□□□□ -1.95
CUS1YMR240C MAK3Q03503 176 aa2.87□□□□□ -1.95
CUS1YMR240C GAS3Q03655 524 aa2.87□□□□□ -1.95
CUS1YMR240C YOL024WQ08172 172 aa2.87□□□□□ -1.95
CUS1YMR240C USB1Q12208 290 aaKnown RBP2.87□□□□□ -1.95
CUS1YMR240C ATO3Q12359 275 aa2.87□□□□□ -1.95
CUS1YMR240C IGO2Q9P305 131 aa2.87□□□□□ -1.95
CUS1YMR240C DNA2P38859 1522 aa2.86□□□□□ -1.95
CUS1YMR240C YLR156WP0CE96 114 aa2.86□□□□□ -1.95
CUS1YMR240C YLR159WP0CE97 114 aa2.86□□□□□ -1.95
CUS1YMR240C YLR161WP0CE98 114 aa2.86□□□□□ -1.95
CUS1YMR240C EDC3P39998 551 aaKnown RBP2.86□□□□□ -1.95
CUS1YMR240C YDC1Q02896 317 aa2.86□□□□□ -1.95
CUS1YMR240C PLP1Q04004 230 aa2.86□□□□□ -1.95
CUS1YMR240C CMD1P06787 147 aaKnown RBP2.85□□□□□ -1.95
CUS1YMR240C MRS1P07266 363 aa2.85□□□□□ -1.95
CUS1YMR240C PET54P10834 293 aa2.85□□□□□ -1.95
CUS1YMR240C SKG1P36169 355 aa2.85□□□□□ -1.95
CUS1YMR240C IGO1P53897 168 aa2.85□□□□□ -1.95
CUS1YMR240C COG5P53951 403 aa2.85□□□□□ -1.95
CUS1YMR240C MRPS8Q03799 155 aa2.85□□□□□ -1.95
CUS1YMR240C ARO80Q04052 950 aa2.85□□□□□ -1.95
CUS1YMR240C YMR315WQ04869 349 aaKnown RBP2.85□□□□□ -1.95
CUS1YMR240C RDI1Q12434 202 aa2.85□□□□□ -1.95
CUS1YMR240C YHR214C-EQ8TGK0 99 aa2.85□□□□□ -1.95
CUS1YMR240C PEP1P32319 1579 aa2.84□□□□□ -1.95
CUS1YMR240C TY1B-JR2P47100 1755 aaKnown RBP2.84□□□□□ -1.95
CUS1YMR240C TY1B-ER2Q03619 1755 aa2.84□□□□□ -1.95
CUS1YMR240C TY1B-MR1Q04214 1755 aa2.84□□□□□ -1.95
CUS1YMR240C TY1B-MR2Q04670 1755 aaKnown RBP2.84□□□□□ -1.95
CUS1YMR240C TY1B-LR1Q12088 1755 aaKnown RBP2.84□□□□□ -1.95
CUS1YMR240C TY1B-NL1Q12112 1755 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms