RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C FAR7P43592 221 aa0□□□□□ -2.41
VPS20YMR077C MPC3P53311 146 aa0□□□□□ -2.41
VPS20YMR077C LAP3Q01532 483 aaKnown RBP RIP-Chip data0□□□□□ -2.41not detected
VPS20YMR077C RRT8Q08219 342 aa0□□□□□ -2.41
VPS20YMR077C YHR214C-EQ8TGK0 99 aa0□□□□□ -2.41
VPS20YMR077C YFR032C-BQ8TGU2 87 aa0□□□□□ -2.41
VPS20YMR077C FMP49A0A023PZB3 126 aa-0.01□□□□□ -2.41
VPS20YMR077C IDH1P28834 360 aaKnown RBP RIP-Chip data-0.01□□□□□ -2.41not detected
VPS20YMR077C HPA3P39979 161 aa-0.01□□□□□ -2.41
VPS20YMR077C FYV6P53913 173 aa-0.01□□□□□ -2.41
VPS20YMR077C RPB3P16370 318 aaKnown RBP-0.02□□□□□ -2.41
VPS20YMR077C PTM1P32857 523 aa-0.02□□□□□ -2.41
VPS20YMR077C RPB7P34087 171 aa-0.02□□□□□ -2.41
VPS20YMR077C ECM4P36156 370 aa-0.02□□□□□ -2.41
VPS20YMR077C COX15P40086 486 aa-0.02□□□□□ -2.41
VPS20YMR077C BRR6P53062 197 aa-0.02□□□□□ -2.41
VPS20YMR077C ALG13P53178 202 aa-0.02□□□□□ -2.41
VPS20YMR077C UPS3Q04006 179 aa-0.02□□□□□ -2.41
VPS20YMR077C YDR391CQ04170 232 aa-0.02□□□□□ -2.41
VPS20YMR077C FIT2Q08906 153 aa-0.02□□□□□ -2.41
VPS20YMR077C IKI3Q06706 1349 aaKnown RBP-0.03□□□□□ -2.41
VPS20YMR077C COX8P04039 78 aa-0.03□□□□□ -2.41
VPS20YMR077C MATALPHA1P0CY06 175 aa-0.03□□□□□ -2.41
VPS20YMR077C HMLALPHA1P0CY07 175 aa-0.03□□□□□ -2.41
VPS20YMR077C YUH1P35127 236 aa-0.03□□□□□ -2.41
VPS20YMR077C MRPL15P36523 253 aa-0.03□□□□□ -2.41
VPS20YMR077C RPC17P47076 161 aa-0.03□□□□□ -2.41
VPS20YMR077C YGR050CP53231 118 aa-0.03□□□□□ -2.41
VPS20YMR077C SED1Q01589 338 aa-0.03□□□□□ -2.41
VPS20YMR077C RRN5Q02983 363 aa-0.03□□□□□ -2.41
VPS20YMR077C SRL4Q03085 281 aa-0.03□□□□□ -2.41
VPS20YMR077C DGA1Q08650 418 aa-0.03□□□□□ -2.41
VPS20YMR077C RRP36Q12481 300 aaPredicted RBP-0.03□□□□□ -2.41
VPS20YMR077C CFT1Q06632 1357 aaKnown RBP-0.04□□□□□ -2.42
VPS20YMR077C POR1P04840 283 aaKnown RBP-0.04□□□□□ -2.42
VPS20YMR077C PRX1P34227 261 aaKnown RBP-0.04□□□□□ -2.42
VPS20YMR077C YIL102CP40488 101 aa-0.04□□□□□ -2.42
VPS20YMR077C YFL051CP43552 160 aa-0.04□□□□□ -2.42
VPS20YMR077C PRP11Q07350 266 aaPredicted RBP-0.04□□□□□ -2.42
VPS20YMR077C YPR013CQ12145 317 aa-0.04□□□□□ -2.42
VPS20YMR077C MED4Q12343 284 aa-0.04□□□□□ -2.42
VPS20YMR077C SEC4P07560 215 aaKnown RBP-0.05□□□□□ -2.42
VPS20YMR077C CKS1P20486 150 aaKnown RBP-0.05□□□□□ -2.42
VPS20YMR077C SSO1P32867 290 aa-0.05□□□□□ -2.42
VPS20YMR077C MSN4P33749 630 aa-0.05□□□□□ -2.42
VPS20YMR077C DAD4P69851 72 aa-0.05□□□□□ -2.42
VPS20YMR077C BNA7Q04066 261 aa-0.05□□□□□ -2.42
VPS20YMR077C YMR226CQ05016 267 aaKnown RBP-0.05□□□□□ -2.42
VPS20YMR077C IRC23Q08416 157 aa-0.05□□□□□ -2.42
VPS20YMR077C ODC2Q99297 307 aa-0.05□□□□□ -2.42
VPS20YMR077C RHO1P06780 209 aaKnown RBP-0.06□□□□□ -2.42
VPS20YMR077C YCR016WP25617 290 aaKnown RBP-0.06□□□□□ -2.42
VPS20YMR077C AHT1P29589 182 aa-0.06□□□□□ -2.42
VPS20YMR077C YHL037CP38733 133 aa-0.06□□□□□ -2.42
VPS20YMR077C MIC26P50087 233 aa-0.06□□□□□ -2.42
VPS20YMR077C PET117Q02771 107 aa-0.06□□□□□ -2.42
VPS20YMR077C RNH202Q05635 350 aa-0.06□□□□□ -2.42
VPS20YMR077C YPR203WQ08994 102 aa-0.06□□□□□ -2.42
VPS20YMR077C CCW12Q12127 133 aa-0.06□□□□□ -2.42
VPS20YMR077C RPL28P02406 149 aaKnown RBP-0.07□□□□□ -2.42
VPS20YMR077C SEN2P16658 377 aa-0.07□□□□□ -2.42
VPS20YMR077C MAG1P22134 296 aaKnown RBP-0.07□□□□□ -2.42
VPS20YMR077C UBC8P28263 218 aa-0.07□□□□□ -2.42
VPS20YMR077C PAN3P36102 679 aaPredicted RBP-0.07□□□□□ -2.42
VPS20YMR077C YAR064WP39563 99 aa-0.07□□□□□ -2.42
VPS20YMR077C FMC1P40491 155 aa-0.07□□□□□ -2.42
VPS20YMR077C GET1P53192 235 aa-0.07□□□□□ -2.42
VPS20YMR077C MET31Q03081 177 aa-0.07□□□□□ -2.42
VPS20YMR077C MIC12P38341 106 aa-0.08□□□□□ -2.42
VPS20YMR077C AIM25P47140 327 aa-0.08□□□□□ -2.42
VPS20YMR077C THG1P53215 237 aaKnown RBP-0.08□□□□□ -2.42
VPS20YMR077C PET191Q02772 108 aa-0.08□□□□□ -2.42
VPS20YMR077C HNT1Q04344 158 aaKnown RBP-0.08□□□□□ -2.42
VPS20YMR077C YLR283WQ05867 314 aa-0.08□□□□□ -2.42
VPS20YMR077C SEY1Q99287 776 aa-0.08□□□□□ -2.42
VPS20YMR077C RPL25P04456 142 aaKnown RBP-0.09□□□□□ -2.42
VPS20YMR077C YMR31P19955 123 aa-0.09□□□□□ -2.42
VPS20YMR077C OCH1P31755 480 aa-0.09□□□□□ -2.42
VPS20YMR077C ARO7P32178 256 aa-0.09□□□□□ -2.42
VPS20YMR077C YBR242WP38331 238 aa-0.09□□□□□ -2.42
VPS20YMR077C ALB1P47019 175 aaPredicted RBP-0.09□□□□□ -2.42
VPS20YMR077C COG5P53951 403 aa-0.09□□□□□ -2.42
VPS20YMR077C YNG1Q08465 219 aa-0.09□□□□□ -2.42
VPS20YMR077C GCN3P14741 305 aa-0.1□□□□□ -2.43
VPS20YMR077C UBC12P52491 188 aa-0.1□□□□□ -2.43
VPS20YMR077C LSM7P53905 115 aaKnown RBP-0.1□□□□□ -2.43
VPS20YMR077C VPS71Q03433 280 aa-0.1□□□□□ -2.43
VPS20YMR077C FIT1Q04433 528 aa-0.1□□□□□ -2.43
VPS20YMR077C INO80P53115 1489 aa-0.1□□□□□ -2.43
VPS20YMR077C THP2O13539 261 aaKnown RBP-0.11□□□□□ -2.43
VPS20YMR077C PHO85P17157 305 aa-0.11□□□□□ -2.43
VPS20YMR077C VMA6P32366 345 aaKnown RBP-0.11□□□□□ -2.43
VPS20YMR077C HMF1P40037 129 aaKnown RBP-0.11□□□□□ -2.43
VPS20YMR077C ADO1P47143 340 aaKnown RBP-0.11□□□□□ -2.43
VPS20YMR077C FYV12Q08559 129 aa-0.11□□□□□ -2.43
VPS20YMR077C TAR1Q8TGM6 124 aa-0.11□□□□□ -2.43
VPS20YMR077C MER1P16523 270 aa-0.12□□□□□ -2.43
VPS20YMR077C YCR090CP25654 182 aaKnown RBP-0.12□□□□□ -2.43
VPS20YMR077C GSP2P32836 220 aaKnown RBP-0.12□□□□□ -2.43
VPS20YMR077C SFK1P35735 353 aa-0.12□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms