RNA–Protein interactions for RNA: YML001W

YPT7, Transcript of Rab family GTPase, yeast

Gene YPT7, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT7	YML001W	YGL114W	P53134	725 aa		3.19	□□□□□ -1.9
YPT7	YML001W	YVH1	Q02256	364 aa	Known RBP	3.19	□□□□□ -1.9
YPT7	YML001W	VPS28	Q02767	242 aa		3.19	□□□□□ -1.9
YPT7	YML001W	SNO1	Q03144	224 aa		3.19	□□□□□ -1.9
YPT7	YML001W	YMR254C	Q04838	102 aa		3.19	□□□□□ -1.9
YPT7	YML001W	YOR376W	Q08900	122 aa		3.19	□□□□□ -1.9
YPT7	YML001W	YMR230W-A	Q3E7B5	62 aa		3.19	□□□□□ -1.9
YPT7	YML001W	ISN1	Q99312	450 aa		3.19	□□□□□ -1.9
YPT7	YML001W	COX5B	P00425	151 aa		3.18	□□□□□ -1.9
YPT7	YML001W	CHO1	P08456	276 aa		3.18	□□□□□ -1.9
YPT7	YML001W	PUT1	P09368	476 aa		3.18	□□□□□ -1.9
YPT7	YML001W	YHR214C-D	P0CX93	97 aa		3.18	□□□□□ -1.9
YPT7	YML001W	MRS4	P23500	304 aa		3.18	□□□□□ -1.9
YPT7	YML001W	ELO2	P25358	347 aa		3.18	□□□□□ -1.9
YPT7	YML001W	STP22	P25604	385 aa		3.18	□□□□□ -1.9
YPT7	YML001W	RFA3	P26755	122 aa	Known RBP	3.18	□□□□□ -1.9
YPT7	YML001W	ERV1	P27882	189 aa		3.18	□□□□□ -1.9
YPT7	YML001W	MSK1	P32048	576 aa		3.18	□□□□□ -1.9
YPT7	YML001W	EMP24	P32803	203 aa	Known RBP	3.18	□□□□□ -1.9
YPT7	YML001W	REC114	P32841	428 aa		3.18	□□□□□ -1.9
YPT7	YML001W	YKL070W	P36087	169 aa		3.18	□□□□□ -1.9
YPT7	YML001W	PRS3	P38689	320 aa	Known RBP	3.18	□□□□□ -1.9
YPT7	YML001W	CUP9	P41817	306 aa		3.18	□□□□□ -1.9
YPT7	YML001W	YGL260W	P53056	76 aa		3.18	□□□□□ -1.9
YPT7	YML001W	NIF3	P53081	288 aa		3.18	□□□□□ -1.9
YPT7	YML001W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
YPT7	YML001W	FMP41	P53889	259 aa	Known RBP	3.18	□□□□□ -1.9
YPT7	YML001W	ODC1	Q03028	310 aa		3.18	□□□□□ -1.9
YPT7	YML001W	YPL039W	Q03080	316 aa		3.18	□□□□□ -1.9
YPT7	YML001W	SDC1	Q03323	175 aa		3.18	□□□□□ -1.9
YPT7	YML001W	CGI121	Q03705	181 aa	Known RBP	3.18	□□□□□ -1.9
YPT7	YML001W	ERP1	Q05359	219 aa	Known RBP	3.18	□□□□□ -1.9
YPT7	YML001W	DXO1	Q06349	442 aa		3.18	□□□□□ -1.9
YPT7	YML001W	SYM1	Q06563	197 aa		3.18	□□□□□ -1.9
YPT7	YML001W	YOR015W	Q12169	119 aa		3.18	□□□□□ -1.9
YPT7	YML001W	MCT1	Q12283	360 aa		3.18	□□□□□ -1.9
YPT7	YML001W	SET6	Q12529	373 aa		3.18	□□□□□ -1.9
YPT7	YML001W	YHR214C-E	Q8TGK0	99 aa		3.18	□□□□□ -1.9
YPT7	YML001W	BEM2	P39960	2167 aa	Known RBP	3.17	□□□□□ -1.9
YPT7	YML001W	IPP1	P00817	287 aa	Known RBP	3.17	□□□□□ -1.9
YPT7	YML001W	ILV5	P06168	395 aa	Known RBP	3.17	□□□□□ -1.9
YPT7	YML001W	YFR010W-A	P0C5N0	62 aa		3.17	□□□□□ -1.9
YPT7	YML001W	MDH2	P22133	377 aa		3.17	□□□□□ -1.9
YPT7	YML001W	ERG8	P24521	451 aa		3.17	□□□□□ -1.9
YPT7	YML001W	EHD3	P28817	500 aa		3.17	□□□□□ -1.9
YPT7	YML001W	TRR1	P29509	319 aa	Known RBP	3.17	□□□□□ -1.9
YPT7	YML001W	LDS1	P31379	325 aa		3.17	□□□□□ -1.9
YPT7	YML001W	GLC7	P32598	312 aa	Known RBP	3.17	□□□□□ -1.9
YPT7	YML001W	AGA2	P32781	87 aa		3.17	□□□□□ -1.9
YPT7	YML001W	MNS1	P32906	549 aa		3.17	□□□□□ -1.9
YPT7	YML001W	SOF1	P33750	489 aa	Known RBP	3.17	□□□□□ -1.9
YPT7	YML001W	CMC1	P36064	111 aa		3.17	□□□□□ -1.9
YPT7	YML001W	AIM29	P36154	155 aa		3.17	□□□□□ -1.9
YPT7	YML001W	ECM31	P38122	312 aa		3.17	□□□□□ -1.9
YPT7	YML001W	PSD1	P39006	500 aa		3.17	□□□□□ -1.9
YPT7	YML001W	CTK2	P46962	323 aa		3.17	□□□□□ -1.9
YPT7	YML001W	COX16	P47081	118 aa		3.17	□□□□□ -1.9
YPT7	YML001W	SLX9	P53251	210 aa	Predicted RBP	3.17	□□□□□ -1.9
YPT7	YML001W	YNR048W	P53740	393 aa		3.17	□□□□□ -1.9
YPT7	YML001W	GPI15	P53961	229 aa		3.17	□□□□□ -1.9
YPT7	YML001W	RSM23	Q01163	450 aa		3.17	□□□□□ -1.9
YPT7	YML001W	ADD37	Q03233	198 aa		3.17	□□□□□ -1.9
YPT7	YML001W	YDR415C	Q04033	374 aa	Predicted RBP	3.17	□□□□□ -1.9
YPT7	YML001W	GMC1	Q04399	608 aa		3.17	□□□□□ -1.9
YPT7	YML001W	HRI1	Q05905	244 aa	Known RBP	3.17	□□□□□ -1.9
YPT7	YML001W	SNU23	Q12368	194 aa	Predicted RBP	3.17	□□□□□ -1.9
YPT7	YML001W	BRR2	P32639	2163 aa	Known RBP	3.17	□□□□□ -1.9
YPT7	YML001W	VPS63	O13549	108 aa		3.16	□□□□□ -1.9
YPT7	YML001W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
YPT7	YML001W	RPL25	P04456	142 aa	Known RBP	3.16	□□□□□ -1.9
YPT7	YML001W	RPS16A	P0CX51	143 aa	Known RBP	3.16	□□□□□ -1.9
YPT7	YML001W	RPS16B	P0CX52	143 aa	Known RBP	3.16	□□□□□ -1.9
YPT7	YML001W	RPL30	P14120	105 aa	Known RBP	3.16	□□□□□ -1.9
YPT7	YML001W	SEC62	P21825	274 aa		3.16	□□□□□ -1.9
YPT7	YML001W	CPR4	P25334	318 aa		3.16	□□□□□ -1.9
YPT7	YML001W	ERV15	P38312	142 aa		3.16	□□□□□ -1.9
YPT7	YML001W	YEA6	P39953	335 aa		3.16	□□□□□ -1.9
YPT7	YML001W	PGD1	P40356	397 aa		3.16	□□□□□ -1.9
YPT7	YML001W	RTS2	P40962	232 aa		3.16	□□□□□ -1.9
YPT7	YML001W	IKS1	P47042	667 aa		3.16	□□□□□ -1.9
YPT7	YML001W	FYV6	P53913	173 aa		3.16	□□□□□ -1.9
YPT7	YML001W	EST3	Q03096	181 aa		3.16	□□□□□ -1.9
YPT7	YML001W	THI74	Q04083	370 aa		3.16	□□□□□ -1.9
YPT7	YML001W	YCT1	Q12235	531 aa		3.16	□□□□□ -1.9
YPT7	YML001W	HUT1	Q12520	339 aa		3.16	□□□□□ -1.9
YPT7	YML001W	SCEI	P03882	235 aa		3.15	□□□□□ -1.91
YPT7	YML001W	QCR2	P07257	368 aa		3.15	□□□□□ -1.91
YPT7	YML001W	SCO1	P23833	295 aa		3.15	□□□□□ -1.91
YPT7	YML001W	YCR101C	P25607	182 aa		3.15	□□□□□ -1.91
YPT7	YML001W	CPR3	P25719	182 aa		3.15	□□□□□ -1.91
YPT7	YML001W	YNK1	P36010	153 aa	Known RBP	3.15	□□□□□ -1.91
YPT7	YML001W	SWD2	P36104	329 aa	Predicted RBP	3.15	□□□□□ -1.91
YPT7	YML001W	GPI16	P38875	610 aa		3.15	□□□□□ -1.91
YPT7	YML001W	YEL057C	P39983	233 aa		3.15	□□□□□ -1.91
YPT7	YML001W	VMA21	P41806	77 aa		3.15	□□□□□ -1.91
YPT7	YML001W	MOB2	P43563	287 aa		3.15	□□□□□ -1.91
YPT7	YML001W	BLM10	P43583	2143 aa		3.15	□□□□□ -1.91
YPT7	YML001W	ECO1	P43605	281 aa		3.15	□□□□□ -1.91
YPT7	YML001W	MRX5	P47007	382 aa		3.15	□□□□□ -1.91
YPT7	YML001W	PGU1	P47180	361 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 81.3 ms