RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C YJL193WP39542 402 aa1.62□□□□□ -2.15
IRC20YLR247C YEL073CP39974 107 aa1.62□□□□□ -2.15
IRC20YLR247C YER010CP40011 234 aa1.62□□□□□ -2.15
IRC20YLR247C YIL012WP40551 113 aa1.62□□□□□ -2.15
IRC20YLR247C YIA6P40556 373 aa1.62□□□□□ -2.15
IRC20YLR247C YJL213WP40896 331 aa1.62□□□□□ -2.15
IRC20YLR247C PMT5P52867 743 aa1.62□□□□□ -2.15
IRC20YLR247C COS10P52924 374 aa1.62□□□□□ -2.15
IRC20YLR247C ERV29P53337 310 aa1.62□□□□□ -2.15
IRC20YLR247C YIF1P53845 314 aaKnown RBP1.62□□□□□ -2.15
IRC20YLR247C RPL15BP54780 204 aaPredicted RBP1.62□□□□□ -2.15
IRC20YLR247C RFM1Q12192 310 aa1.62□□□□□ -2.15
IRC20YLR247C AAC1P04710 309 aa1.62□□□□□ -2.15
IRC20YLR247C SST2P11972 698 aaKnown RBP1.62□□□□□ -2.15
IRC20YLR247C YAK1P14680 807 aa1.62□□□□□ -2.15
IRC20YLR247C NUP1P20676 1076 aa1.62□□□□□ -2.15
IRC20YLR247C YPK3P38070 525 aa1.62□□□□□ -2.15
IRC20YLR247C THI2P38141 450 aa1.62□□□□□ -2.15
IRC20YLR247C AME1P38313 324 aa1.62□□□□□ -2.15
IRC20YLR247C BDH1P39714 382 aa1.62□□□□□ -2.15
IRC20YLR247C VTC1P40046 129 aaRIP-Chip data1.62□□□□□ -2.15 RIP-Chip
IRC20YLR247C YER085CP40058 173 aa1.62□□□□□ -2.15
IRC20YLR247C PGD1P40356 397 aa1.62□□□□□ -2.15
IRC20YLR247C IST3P40565 148 aaPredicted RBP1.62□□□□□ -2.15
IRC20YLR247C SHR5P41912 237 aa1.62□□□□□ -2.15
IRC20YLR247C YJR015WP47090 510 aa1.62□□□□□ -2.15
IRC20YLR247C AIM24P47127 394 aa1.62□□□□□ -2.15
IRC20YLR247C YGL260WP53056 76 aa1.62□□□□□ -2.15
IRC20YLR247C YGR079WP53249 370 aa1.62□□□□□ -2.15
IRC20YLR247C YNR040WP53736 256 aa1.62□□□□□ -2.15
IRC20YLR247C PDR17P53844 350 aa1.62□□□□□ -2.15
IRC20YLR247C YPL077CQ02831 240 aa1.62□□□□□ -2.15
IRC20YLR247C ROT1Q03691 256 aa1.62□□□□□ -2.15
IRC20YLR247C THI7Q05998 598 aa1.62□□□□□ -2.15
IRC20YLR247C YPR196WQ06595 470 aa1.62□□□□□ -2.15
IRC20YLR247C DAD1Q12248 94 aa1.62□□□□□ -2.15
IRC20YLR247C DGK1Q12382 290 aa1.62□□□□□ -2.15
IRC20YLR247C TY1A-NL1Q12391 440 aaKnown RBP1.62□□□□□ -2.15
IRC20YLR247C RIB3Q99258 208 aa1.62□□□□□ -2.15
IRC20YLR247C FAS1P07149 2051 aaKnown RBP1.62□□□□□ -2.15
IRC20YLR247C MRS1P07266 363 aa1.61□□□□□ -2.15
IRC20YLR247C SCH9P11792 824 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C APA2P22108 325 aa1.61□□□□□ -2.15
IRC20YLR247C PRE2P30656 287 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C THI4P32318 326 aa1.61□□□□□ -2.15
IRC20YLR247C RPD3P32561 433 aa1.61□□□□□ -2.15
IRC20YLR247C SNC2P33328 115 aa1.61□□□□□ -2.15
IRC20YLR247C BAP2P38084 609 aa1.61□□□□□ -2.15
IRC20YLR247C INM1P38710 295 aa1.61□□□□□ -2.15
IRC20YLR247C YHR097CP38809 366 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C YNL195CP40168 261 aa1.61□□□□□ -2.15
IRC20YLR247C YIL152WP40455 235 aa1.61□□□□□ -2.15
IRC20YLR247C GDS1P41913 522 aa1.61□□□□□ -2.15
IRC20YLR247C SPC1P46965 94 aa1.61□□□□□ -2.15
IRC20YLR247C YGL101WP53144 215 aa1.61□□□□□ -2.15
IRC20YLR247C YGL034CP53186 121 aa1.61□□□□□ -2.15
IRC20YLR247C YGR015CP53208 328 aa1.61□□□□□ -2.15
IRC20YLR247C BOR1P53838 576 aa1.61□□□□□ -2.15
IRC20YLR247C RPL21AQ02753 160 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C YPL039WQ03080 316 aa1.61□□□□□ -2.15
IRC20YLR247C ARR1Q06596 294 aa1.61□□□□□ -2.15
IRC20YLR247C IPK1Q06667 281 aa1.61□□□□□ -2.15
IRC20YLR247C NGL1Q08213 363 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C PFA4Q12006 378 aa1.61□□□□□ -2.15
IRC20YLR247C ATX2Q12067 313 aa1.61□□□□□ -2.15
IRC20YLR247C RDL1Q12305 139 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C RPL21BQ12672 160 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C FOL3Q12676 427 aaPredicted RBP1.61□□□□□ -2.15
IRC20YLR247C WIP1Q2V2P8 89 aa1.61□□□□□ -2.15
IRC20YLR247C ISD11Q6Q560 94 aa1.61□□□□□ -2.15
IRC20YLR247C CPT1P17898 393 aa1.61□□□□□ -2.15
IRC20YLR247C CMC1P36064 111 aa1.61□□□□□ -2.15
IRC20YLR247C PRY2P36110 329 aa1.61□□□□□ -2.15
IRC20YLR247C YBR013CP38215 129 aa1.61□□□□□ -2.15
IRC20YLR247C SHU1P38751 150 aa1.61□□□□□ -2.15
IRC20YLR247C GDI1P39958 451 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C YEL068CP39977 110 aa1.61□□□□□ -2.15
IRC20YLR247C YER188WP40103 239 aa1.61□□□□□ -2.15
IRC20YLR247C HMS2P47175 358 aa1.61□□□□□ -2.15
IRC20YLR247C BAT2P47176 376 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C YIP4P53093 235 aa1.61□□□□□ -2.15
IRC20YLR247C MTQ1P53944 314 aa1.61□□□□□ -2.15
IRC20YLR247C SNP1Q00916 300 aaPredicted RBP1.61□□□□□ -2.15
IRC20YLR247C YDR476CQ03362 224 aa1.61□□□□□ -2.15
IRC20YLR247C FSH2Q05015 223 aa1.61□□□□□ -2.15
IRC20YLR247C KEI1Q06346 221 aa1.61□□□□□ -2.15
IRC20YLR247C MSA1Q08471 629 aa1.61□□□□□ -2.15
IRC20YLR247C SYC1Q08553 188 aaPredicted RBP1.61□□□□□ -2.15
IRC20YLR247C FMP16Q12497 93 aa1.61□□□□□ -2.15
IRC20YLR247C TMA7Q3E764 64 aaKnown RBP1.61□□□□□ -2.15
IRC20YLR247C BI3Q9ZZW7 517 aa1.61□□□□□ -2.15
IRC20YLR247C AQY1P0CD91 305 aa1.61□□□□□ -2.15
IRC20YLR247C HSP26P15992 214 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15 RIP-Chip
IRC20YLR247C BUD23P25627 275 aaPredicted RBP1.61□□□□□ -2.15
IRC20YLR247C AEP1P32493 518 aa1.61□□□□□ -2.15
IRC20YLR247C PAD1P33751 242 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
IRC20YLR247C YOR062CP36025 268 aa1.61□□□□□ -2.15
IRC20YLR247C YBR209WP38311 105 aa1.61□□□□□ -2.15
IRC20YLR247C XBP1P40489 647 aa1.61□□□□□ -2.15
IRC20YLR247C FMP33P46998 180 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms