RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C FMP32P43557 207 aa2.34□□□□□ -2.03
SED5YLR026C YJL118WP47022 219 aa2.34□□□□□ -2.03
SED5YLR026C YGL034CP53186 121 aa2.34□□□□□ -2.03
SED5YLR026C CAB4P53332 305 aa2.34□□□□□ -2.03
SED5YLR026C MAL13P53338 473 aa2.34□□□□□ -2.03
SED5YLR026C OST6Q03723 332 aa2.34□□□□□ -2.03
SED5YLR026C ATC1Q04005 294 aa2.34□□□□□ -2.03
SED5YLR026C CTS2Q06350 511 aa2.34□□□□□ -2.03
SED5YLR026C YOR283WQ12040 230 aaKnown RBP2.34□□□□□ -2.03
SED5YLR026C YDL180WQ12301 547 aa2.34□□□□□ -2.03
SED5YLR026C YCR090CP25654 182 aaKnown RBP2.33□□□□□ -2.04
SED5YLR026C YCR087C-AP37263 153 aa2.33□□□□□ -2.04
SED5YLR026C YBR096WP38256 230 aa2.33□□□□□ -2.04
SED5YLR026C SUR2P38992 349 aa2.33□□□□□ -2.04
SED5YLR026C YIR020CP40575 100 aa2.33□□□□□ -2.04
SED5YLR026C MRX5P47007 382 aa2.33□□□□□ -2.04
SED5YLR026C DAN1P47178 298 aa2.33□□□□□ -2.04
SED5YLR026C SBH2P52871 88 aa2.33□□□□□ -2.04
SED5YLR026C ADH6Q04894 360 aaKnown RBP2.33□□□□□ -2.04
SED5YLR026C YOR268CQ08734 132 aa2.33□□□□□ -2.04
SED5YLR026C YPL247CQ12523 523 aa2.33□□□□□ -2.04
SED5YLR026C YMR030W-AQ3E760 96 aa2.33□□□□□ -2.04
SED5YLR026C NMT1P14743 455 aa2.32□□□□□ -2.04
SED5YLR026C AIM2P39721 246 aa2.32□□□□□ -2.04
SED5YLR026C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
SED5YLR026C SWP1Q02795 286 aa2.32□□□□□ -2.04
SED5YLR026C NCE101Q02820 53 aa2.32□□□□□ -2.04
SED5YLR026C GRH1Q04410 372 aaKnown RBP2.32□□□□□ -2.04
SED5YLR026C CSI2Q08054 341 aa2.32□□□□□ -2.04
SED5YLR026C RTR2Q12378 196 aa2.32□□□□□ -2.04
SED5YLR026C MHT1Q12525 324 aa2.32□□□□□ -2.04
SED5YLR026C RPL26AP05743 127 aaKnown RBP2.31□□□□□ -2.04
SED5YLR026C RHO1P06780 209 aaKnown RBP2.31□□□□□ -2.04
SED5YLR026C SPT3P06844 337 aa2.31□□□□□ -2.04
SED5YLR026C GCY1P14065 312 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SED5YLR026C PBN1P25580 416 aa2.31□□□□□ -2.04
SED5YLR026C RPS5P26783 225 aaKnown RBP2.31□□□□□ -2.04
SED5YLR026C RPS1AP33442 255 aaKnown RBP2.31□□□□□ -2.04
SED5YLR026C PRS2P38620 318 aaKnown RBP2.31□□□□□ -2.04
SED5YLR026C NSG1P38837 291 aa2.31□□□□□ -2.04
SED5YLR026C SMB1P40018 196 aaKnown RBP2.31□□□□□ -2.04
SED5YLR026C BAT2P47176 376 aaKnown RBP2.31□□□□□ -2.04
SED5YLR026C AIF1P52923 378 aa2.31□□□□□ -2.04
SED5YLR026C RPL26BP53221 127 aaKnown RBP2.31□□□□□ -2.04
SED5YLR026C SED1Q01589 338 aa2.31□□□□□ -2.04
SED5YLR026C CTF19Q02732 369 aa2.31□□□□□ -2.04
SED5YLR026C RIM9Q04734 239 aa2.31□□□□□ -2.04
SED5YLR026C YLR036CQ07986 203 aa2.31□□□□□ -2.04
SED5YLR026C MHF1Q3E835 90 aa2.31□□□□□ -2.04
SED5YLR026C CBF1P17106 351 aa2.3□□□□□ -2.04
SED5YLR026C GDH2P33327 1092 aaKnown RBP2.3□□□□□ -2.04
SED5YLR026C YOR062CP36025 268 aa2.3□□□□□ -2.04
SED5YLR026C TAD2P47058 250 aa2.3□□□□□ -2.04
SED5YLR026C ADO1P47143 340 aaKnown RBP2.3□□□□□ -2.04
SED5YLR026C SIP18P50263 79 aa2.3□□□□□ -2.04
SED5YLR026C RPL22BP56628 122 aaKnown RBP2.3□□□□□ -2.04
SED5YLR026C PRM15Q03262 622 aa2.3□□□□□ -2.04
SED5YLR026C YET3Q07451 203 aa2.3□□□□□ -2.04
SED5YLR026C SDO1Q07953 250 aaKnown RBP2.3□□□□□ -2.04
SED5YLR026C UIP4Q08926 304 aa2.3□□□□□ -2.04
SED5YLR026C YGR035W-AQ45U48 73 aa2.3□□□□□ -2.04
SED5YLR026C RPL24AP04449 155 aaKnown RBP2.29□□□□□ -2.04
SED5YLR026C ETR1P38071 380 aa2.29□□□□□ -2.04
SED5YLR026C PHO89P38361 574 aa2.29□□□□□ -2.04
SED5YLR026C YHR180WP38868 163 aa2.29□□□□□ -2.04
SED5YLR026C AGX1P43567 385 aa2.29□□□□□ -2.04
SED5YLR026C YFR054CP43622 192 aa2.29□□□□□ -2.04
SED5YLR026C GTR2P53290 341 aa2.29□□□□□ -2.04
SED5YLR026C MPP6P53725 186 aaPredicted RBP2.29□□□□□ -2.04
SED5YLR026C RCE1Q03530 315 aa2.29□□□□□ -2.04
SED5YLR026C YPR202WQ08993 238 aa2.29□□□□□ -2.04
SED5YLR026C SNF8Q12483 233 aa2.29□□□□□ -2.04
SED5YLR026C YPL229WQ99395 206 aa2.29□□□□□ -2.04
SED5YLR026C YMR316C-AI2HB70 103 aa2.28□□□□□ -2.04
SED5YLR026C DPM1P14020 267 aaKnown RBP2.28□□□□□ -2.04
SED5YLR026C KSS1P14681 368 aa2.28□□□□□ -2.04
SED5YLR026C CAM1P29547 415 aaKnown RBP2.28□□□□□ -2.04
SED5YLR026C QRI5P32344 111 aa2.28□□□□□ -2.04
SED5YLR026C VMA11P32842 164 aa2.28□□□□□ -2.04
SED5YLR026C PRS4P38063 326 aaPredicted RBP2.28□□□□□ -2.04
SED5YLR026C HEK2P38199 381 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04 RIP-Chip
SED5YLR026C BIG1P38813 335 aa2.28□□□□□ -2.04
SED5YLR026C RFC4P40339 323 aaKnown RBP2.28□□□□□ -2.04
SED5YLR026C YJL028WP47062 111 aa2.28□□□□□ -2.04
SED5YLR026C YPR147CQ06522 304 aaKnown RBP2.28□□□□□ -2.04
SED5YLR026C CTR3Q06686 241 aa2.28□□□□□ -2.04
SED5YLR026C COQ10Q08058 207 aa2.28□□□□□ -2.04
SED5YLR026C RAS2P01120 322 aaKnown RBP2.27□□□□□ -2.05
SED5YLR026C MRPL25P23369 157 aa2.27□□□□□ -2.05
SED5YLR026C HOM6P31116 359 aaKnown RBP2.27□□□□□ -2.05
SED5YLR026C SEC17P32602 292 aa2.27□□□□□ -2.05
SED5YLR026C CLG1P35190 452 aa2.27□□□□□ -2.05
SED5YLR026C NRG2P38082 220 aa2.27□□□□□ -2.05
SED5YLR026C COG3P40094 801 aa2.27□□□□□ -2.05
SED5YLR026C PEP8P40335 379 aa2.27□□□□□ -2.05
SED5YLR026C COS6P53344 381 aa2.27□□□□□ -2.05
SED5YLR026C AAH1P53909 347 aa2.27□□□□□ -2.05
SED5YLR026C IRC19Q07843 230 aa2.27□□□□□ -2.05
SED5YLR026C YOL019WQ08157 551 aa2.27□□□□□ -2.05
SED5YLR026C YOR214CQ12282 236 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms