RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W AQY1P0CD91 305 aa3.92□□□□□ -1.78
LDB18YLL049W MATALPHA1P0CY06 175 aa3.92□□□□□ -1.78
LDB18YLL049W HMLALPHA1P0CY07 175 aa3.92□□□□□ -1.78
LDB18YLL049W HYM1P32464 399 aa3.92□□□□□ -1.78
LDB18YLL049W PRP21P32524 280 aaPredicted RBP3.92□□□□□ -1.78
LDB18YLL049W ALK2P32789 676 aaPredicted RBP3.92□□□□□ -1.78
LDB18YLL049W YNL194CP40169 301 aa3.92□□□□□ -1.78
LDB18YLL049W GWT1P47026 490 aa3.92□□□□□ -1.78
LDB18YLL049W ERG25P53045 309 aa3.92□□□□□ -1.78
LDB18YLL049W EOS1P53938 366 aa3.92□□□□□ -1.78
LDB18YLL049W YMR099CQ03161 297 aaKnown RBP3.92□□□□□ -1.78
LDB18YLL049W YPD1Q07688 167 aa3.92□□□□□ -1.78
LDB18YLL049W VIK1Q12045 647 aa3.92□□□□□ -1.78
LDB18YLL049W AEP3Q12089 606 aa3.92□□□□□ -1.78
LDB18YLL049W TAR1Q8TGM6 124 aa3.92□□□□□ -1.78
LDB18YLL049W RPN13O13563 156 aa3.91□□□□□ -1.78
LDB18YLL049W RPL31BP0C2H9 113 aaKnown RBP3.91□□□□□ -1.78
LDB18YLL049W UBC8P28263 218 aa3.91□□□□□ -1.78
LDB18YLL049W SNC2P33328 115 aa3.91□□□□□ -1.78
LDB18YLL049W RCN1P36054 211 aa3.91□□□□□ -1.78
LDB18YLL049W YBR285WP38354 144 aa3.91□□□□□ -1.78
LDB18YLL049W YHK8P38776 514 aa3.91□□□□□ -1.78
LDB18YLL049W SNZ1Q03148 297 aa3.91□□□□□ -1.78
LDB18YLL049W SMP3Q04174 516 aa3.91□□□□□ -1.78
LDB18YLL049W FSH2Q05015 223 aa3.91□□□□□ -1.78
LDB18YLL049W PEX30Q06169 523 aa3.91□□□□□ -1.78
LDB18YLL049W PBP4Q07362 185 aaKnown RBP3.91□□□□□ -1.78
LDB18YLL049W YOL118CQ08259 102 aa3.91□□□□□ -1.78
LDB18YLL049W YOS1Q3E834 85 aa3.91□□□□□ -1.78
LDB18YLL049W COX9P07255 59 aa3.9□□□□□ -1.79
LDB18YLL049W ARO7P32178 256 aa3.9□□□□□ -1.79
LDB18YLL049W ECM25P32525 599 aa3.9□□□□□ -1.79
LDB18YLL049W YKL063CP35725 167 aa3.9□□□□□ -1.79
LDB18YLL049W SHE1P38200 338 aa3.9□□□□□ -1.79
LDB18YLL049W SLM4P38247 162 aa3.9□□□□□ -1.79
LDB18YLL049W IMD2P38697 523 aaKnown RBP3.9□□□□□ -1.79
LDB18YLL049W POP2P39008 433 aa3.9□□□□□ -1.79
LDB18YLL049W AIM10P39965 576 aaKnown RBP3.9□□□□□ -1.79
LDB18YLL049W ATG18P43601 500 aa3.9□□□□□ -1.79
LDB18YLL049W YGR219WP53307 113 aa3.9□□□□□ -1.79
LDB18YLL049W YMR181CQ03231 154 aa3.9□□□□□ -1.79
LDB18YLL049W RRP17Q04031 235 aaPredicted RBP3.9□□□□□ -1.79
LDB18YLL049W YLR283WQ05867 314 aa3.9□□□□□ -1.79
LDB18YLL049W DGK1Q12382 290 aa3.9□□□□□ -1.79
LDB18YLL049W YGL041W-AP0C5N3 154 aa3.89□□□□□ -1.79
LDB18YLL049W BUD23P25627 275 aaPredicted RBP3.89□□□□□ -1.79
LDB18YLL049W UMP1P38293 148 aa3.89□□□□□ -1.79
LDB18YLL049W MED8P38304 223 aa3.89□□□□□ -1.79
LDB18YLL049W RFC2P40348 353 aa3.89□□□□□ -1.79
LDB18YLL049W YGR149WP48236 432 aa3.89□□□□□ -1.79
LDB18YLL049W YMD8Q03697 442 aa3.89□□□□□ -1.79
LDB18YLL049W DTD1Q07648 150 aaKnown RBP3.89□□□□□ -1.79
LDB18YLL049W OSW1Q08692 278 aa3.89□□□□□ -1.79
LDB18YLL049W YPL225WQ08971 146 aaKnown RBP3.89□□□□□ -1.79
LDB18YLL049W DCP1Q12517 231 aaPredicted RBP3.89□□□□□ -1.79
LDB18YLL049W SAL1D6W196 494 aa3.88□□□□□ -1.79
LDB18YLL049W UTP30P36144 274 aaKnown RBP3.88□□□□□ -1.79
LDB18YLL049W MIC12P38341 106 aa3.88□□□□□ -1.79
LDB18YLL049W YER137CP40083 148 aaKnown RBP3.88□□□□□ -1.79
LDB18YLL049W PRM5P40476 318 aa3.88□□□□□ -1.79
LDB18YLL049W ATG27P46989 271 aa3.88□□□□□ -1.79
LDB18YLL049W HAM1P47119 197 aaKnown RBP3.88□□□□□ -1.79
LDB18YLL049W CAX4P53223 239 aa3.88□□□□□ -1.79
LDB18YLL049W COG5P53951 403 aa3.88□□□□□ -1.79
LDB18YLL049W COX12Q01519 83 aa3.88□□□□□ -1.79
LDB18YLL049W NMA1Q06178 401 aaKnown RBP3.88□□□□□ -1.79
LDB18YLL049W YPL119C-AQ3E751 87 aa3.88□□□□□ -1.79
LDB18YLL049W PMR1P13586 950 aa3.87□□□□□ -1.79
LDB18YLL049W MRPL38P35996 138 aaPredicted RBP3.87□□□□□ -1.79
LDB18YLL049W MBB1P39534 108 aa3.87□□□□□ -1.79
LDB18YLL049W AGX1P43567 385 aa3.87□□□□□ -1.79
LDB18YLL049W TMA22P47089 198 aaPredicted RBP3.87□□□□□ -1.79
LDB18YLL049W SCW4P53334 386 aaKnown RBP3.87□□□□□ -1.79
LDB18YLL049W YMR252CQ04814 134 aa3.87□□□□□ -1.79
LDB18YLL049W PEX10Q05568 337 aa3.87□□□□□ -1.79
LDB18YLL049W STF1P01098 86 aa3.86□□□□□ -1.79
LDB18YLL049W YPS1P32329 569 aa3.86□□□□□ -1.79
LDB18YLL049W VAM7P32912 316 aa3.86□□□□□ -1.79
LDB18YLL049W DAD2P36162 133 aa3.86□□□□□ -1.79
LDB18YLL049W QDR3P38227 689 aa3.86□□□□□ -1.79
LDB18YLL049W GNA1P43577 159 aaPredicted RBP3.86□□□□□ -1.79
LDB18YLL049W PAU12P53343 120 aa3.86□□□□□ -1.79
LDB18YLL049W BUD25P85052 153 aa3.86□□□□□ -1.79
LDB18YLL049W YMR130WQ04223 302 aa3.86□□□□□ -1.79
LDB18YLL049W ATG17Q06410 417 aa3.86□□□□□ -1.79
LDB18YLL049W ASR1Q06834 288 aa3.86□□□□□ -1.79
LDB18YLL049W YPR013CQ12145 317 aa3.86□□□□□ -1.79
LDB18YLL049W PET18P25362 215 aa3.85□□□□□ -1.79
LDB18YLL049W LSB5P25369 354 aa3.85□□□□□ -1.79
LDB18YLL049W OCH1P31755 480 aa3.85□□□□□ -1.79
LDB18YLL049W GEP4P38812 185 aa3.85□□□□□ -1.79
LDB18YLL049W IKI1P38874 309 aa3.85□□□□□ -1.79
LDB18YLL049W THO1P40040 218 aaKnown RBP3.85□□□□□ -1.79
LDB18YLL049W YJL218WP40892 196 aaKnown RBP3.85□□□□□ -1.79
LDB18YLL049W ALG9P53868 555 aaKnown RBP3.85□□□□□ -1.79
LDB18YLL049W SPC24Q04477 213 aa3.85□□□□□ -1.79
LDB18YLL049W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
LDB18YLL049W IRC23Q08416 157 aa3.85□□□□□ -1.79
LDB18YLL049W YPR1Q12458 312 aa3.85□□□□□ -1.79
LDB18YLL049W YLL053CP0CD98 152 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms