RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeastyeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCE1YKL011C FZF1P32805 299 aa1.84□□□□□ -2.11
CCE1YKL011C AIM25P47140 327 aa1.84□□□□□ -2.11
CCE1YKL011C GET1P53192 235 aa1.84□□□□□ -2.11
CCE1YKL011C NOP19P53317 196 aaPredicted RBP1.84□□□□□ -2.11
CCE1YKL011C YNG1Q08465 219 aa1.84□□□□□ -2.11
CCE1YKL011C MAG1P22134 296 aaKnown RBP1.83□□□□□ -2.12
CCE1YKL011C YBR219CP38317 127 aa1.83□□□□□ -2.12
CCE1YKL011C AVT2P39981 480 aa1.83□□□□□ -2.12
CCE1YKL011C HMF1P40037 129 aaKnown RBP1.83□□□□□ -2.12
CCE1YKL011C YDR274CP87283 123 aa1.83□□□□□ -2.12
CCE1YKL011C ABP140Q08641 628 aaKnown RBP1.83□□□□□ -2.12
CCE1YKL011C GPM2Q12008 311 aa1.83□□□□□ -2.12
CCE1YKL011C PDR18P53756 1333 aa1.83□□□□□ -2.12
CCE1YKL011C ATP15P21306 62 aa1.82□□□□□ -2.12
CCE1YKL011C GAA1P39012 614 aa1.82□□□□□ -2.12
CCE1YKL011C GGA1Q06336 557 aa1.82□□□□□ -2.12
CCE1YKL011C FSF1Q12029 327 aaKnown RBP1.82□□□□□ -2.12
CCE1YKL011C FLO9P39712 1322 aa1.82□□□□□ -2.12
CCE1YKL011C IKI3Q06706 1349 aaKnown RBP1.82□□□□□ -2.12
CCE1YKL011C QCR7P00128 127 aa1.81□□□□□ -2.12
CCE1YKL011C CPA1P07258 411 aaKnown RBP1.81□□□□□ -2.12
CCE1YKL011C CKS1P20486 150 aaKnown RBP1.81□□□□□ -2.12
CCE1YKL011C MMS2P53152 137 aa1.81□□□□□ -2.12
CCE1YKL011C SIR2P06700 562 aa1.8□□□□□ -2.12
CCE1YKL011C RPL27AP0C2H6 136 aaKnown RBP1.8□□□□□ -2.12
CCE1YKL011C YBR285WP38354 144 aa1.8□□□□□ -2.12
CCE1YKL011C GLE2P40066 365 aa1.8□□□□□ -2.12
CCE1YKL011C YER135CP40082 130 aa1.8□□□□□ -2.12
CCE1YKL011C RAD9P14737 1309 aa1.8□□□□□ -2.12
CCE1YKL011C MET5P47169 1442 aa1.8□□□□□ -2.12
CCE1YKL011C MRS1P07266 363 aa1.79□□□□□ -2.12
CCE1YKL011C YOL162WP0CF19 215 aa1.79□□□□□ -2.12
CCE1YKL011C YPK2P18961 677 aa1.79□□□□□ -2.12
CCE1YKL011C ERG10P41338 398 aaKnown RBP1.79□□□□□ -2.12
CCE1YKL011C SAY1P53324 424 aa1.79□□□□□ -2.12
CCE1YKL011C CSI2Q08054 341 aa1.79□□□□□ -2.12
CCE1YKL011C ASF2P32448 525 aaPredicted RBP1.78□□□□□ -2.12
CCE1YKL011C YKR045CP36138 183 aa1.78□□□□□ -2.12
CCE1YKL011C HNT1Q04344 158 aaKnown RBP1.78□□□□□ -2.12
CCE1YKL011C YLR162WQ06235 118 aa1.78□□□□□ -2.12
CCE1YKL011C ATG40Q99325 256 aa1.78□□□□□ -2.12
CCE1YKL011C APA2P22108 325 aa1.77□□□□□ -2.13
CCE1YKL011C CNB1P25296 175 aa1.77□□□□□ -2.13
CCE1YKL011C SHE2P36068 246 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
CCE1YKL011C YBR209WP38311 105 aa1.77□□□□□ -2.13
CCE1YKL011C ANT1Q06497 328 aa1.77□□□□□ -2.13
CCE1YKL011C YLR236CA0A023PZG4 107 aa1.76□□□□□ -2.13
CCE1YKL011C MBF1O14467 151 aaKnown RBP1.76□□□□□ -2.13
CCE1YKL011C IGO2Q9P305 131 aa1.76□□□□□ -2.13
CCE1YKL011C CYR1P08678 2026 aaKnown RBP1.76□□□□□ -2.13
CCE1YKL011C YGL010WP25338 174 aa1.75□□□□□ -2.13
CCE1YKL011C OCH1P31755 480 aa1.75□□□□□ -2.13
CCE1YKL011C TFC1P32367 649 aa1.75□□□□□ -2.13
CCE1YKL011C TMA19P35691 167 aaKnown RBP1.75□□□□□ -2.13
CCE1YKL011C KDX1P36005 433 aa1.75□□□□□ -2.13
CCE1YKL011C OPY1P38271 328 aa1.75□□□□□ -2.13
CCE1YKL011C ERJ5P43613 295 aaPredicted RBP1.75□□□□□ -2.13
CCE1YKL011C ARP3P47117 449 aaKnown RBP1.75□□□□□ -2.13
CCE1YKL011C KNH1P50112 268 aa1.75□□□□□ -2.13
CCE1YKL011C POP3P53833 195 aaPredicted RBP1.75□□□□□ -2.13
CCE1YKL011C FUS2Q05670 677 aa1.75□□□□□ -2.13
CCE1YKL011C POR1P04840 283 aaKnown RBP1.74□□□□□ -2.13
CCE1YKL011C YCR090CP25654 182 aaKnown RBP1.74□□□□□ -2.13
CCE1YKL011C ADE1P27616 306 aa1.74□□□□□ -2.13
CCE1YKL011C YBR220CP38318 560 aa1.74□□□□□ -2.13
CCE1YKL011C ARO80Q04052 950 aa1.74□□□□□ -2.13
CCE1YKL011C ODC2Q99297 307 aa1.74□□□□□ -2.13
CCE1YKL011C RPL2AP0CX45 254 aaKnown RBP1.73□□□□□ -2.13
CCE1YKL011C RPL2BP0CX46 254 aaKnown RBP1.73□□□□□ -2.13
CCE1YKL011C PAN3P36102 679 aaPredicted RBP1.73□□□□□ -2.13
CCE1YKL011C AIM2P39721 246 aa1.73□□□□□ -2.13
CCE1YKL011C RPL13BP40212 199 aaKnown RBP1.73□□□□□ -2.13
CCE1YKL011C MPC3P53311 146 aa1.73□□□□□ -2.13
CCE1YKL011C YNL184CP53876 108 aa1.73□□□□□ -2.13
CCE1YKL011C DGA1Q08650 418 aa1.73□□□□□ -2.13
CCE1YKL011C RAD28Q12021 506 aa1.73□□□□□ -2.13
CCE1YKL011C RIO1Q12196 484 aaKnown RBP1.73□□□□□ -2.13
CCE1YKL011C RPL13AQ12690 199 aaPredicted RBP1.73□□□□□ -2.13
CCE1YKL011C UPS2P35200 230 aa1.72□□□□□ -2.13
CCE1YKL011C VMA22P38784 181 aa1.72□□□□□ -2.13
CCE1YKL011C YEA4P40004 342 aa1.72□□□□□ -2.13
CCE1YKL011C SER2P42941 309 aa1.72□□□□□ -2.13
CCE1YKL011C SKI6P46948 246 aaPredicted RBP1.72□□□□□ -2.13
CCE1YKL011C ARO8P53090 500 aaKnown RBP1.72□□□□□ -2.13
CCE1YKL011C CUE4Q04201 117 aaPredicted RBP1.72□□□□□ -2.13
CCE1YKL011C UBR2Q07963 1872 aa1.71□□□□□ -2.14
CCE1YKL011C QCR8P08525 94 aa1.71□□□□□ -2.14
CCE1YKL011C SEC11P15367 167 aa1.71□□□□□ -2.14
CCE1YKL011C SPO13P23624 291 aa1.71□□□□□ -2.14
CCE1YKL011C TVP23P38962 199 aa1.71□□□□□ -2.14
CCE1YKL011C PDS1P40316 373 aaPredicted RBP1.71□□□□□ -2.14
CCE1YKL011C YJR111CP47148 283 aaKnown RBP1.71□□□□□ -2.14
CCE1YKL011C UBC12P52491 188 aa1.71□□□□□ -2.14
CCE1YKL011C GIM3P53900 129 aa1.71□□□□□ -2.14
CCE1YKL011C NUP49Q02199 472 aa1.71□□□□□ -2.14
CCE1YKL011C YOL014WQ08110 124 aa1.71□□□□□ -2.14
CCE1YKL011C YOL024WQ08172 172 aa1.71□□□□□ -2.14
CCE1YKL011C GPA2P10823 449 aa1.7□□□□□ -2.14
CCE1YKL011C FPR1P20081 114 aaKnown RBP1.7□□□□□ -2.14
CCE1YKL011C RTC4P53850 401 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms