RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W ECM33P38248 429 aaKnown RBP5.92□□□□□ -1.46
NMD5YJR132W MDM31P38880 579 aa5.92□□□□□ -1.46
NMD5YJR132W AVT2P39981 480 aa5.92□□□□□ -1.46
NMD5YJR132W TIS11P47977 285 aa5.92□□□□□ -1.46
NMD5YJR132W YMR178WQ03219 274 aaKnown RBP5.92□□□□□ -1.46
NMD5YJR132W YOR376WQ08900 122 aa5.92□□□□□ -1.46
NMD5YJR132W YHK8P38776 514 aa5.92□□□□□ -1.46
NMD5YJR132W YEA4P40004 342 aa5.92□□□□□ -1.46
NMD5YJR132W YKR011CQ02209 353 aa5.92□□□□□ -1.46
NMD5YJR132W INM2Q05533 292 aa5.92□□□□□ -1.46
NMD5YJR132W TY3B-IQ7LHG5 1498 aaKnown RBP5.91□□□□□ -1.46
NMD5YJR132W HMRA1P0CY11 126 aa5.91□□□□□ -1.46
NMD5YJR132W MSN2P33748 704 aa5.91□□□□□ -1.46
NMD5YJR132W NDT80P38830 627 aa5.91□□□□□ -1.46
NMD5YJR132W NCE103P53615 221 aa5.91□□□□□ -1.46
NMD5YJR132W MSS11Q03825 758 aa5.91□□□□□ -1.46
NMD5YJR132W UTP23Q12339 254 aaKnown RBP5.91□□□□□ -1.46
NMD5YJR132W COA6Q3E846 104 aa5.91□□□□□ -1.46
NMD5YJR132W FMP49A0A023PZB3 126 aa5.91□□□□□ -1.46
NMD5YJR132W BI2P03873 423 aa5.91□□□□□ -1.46
NMD5YJR132W RPL20AP0CX23 172 aaKnown RBP5.91□□□□□ -1.46
NMD5YJR132W RPL20BP0CX24 172 aaPredicted RBP5.91□□□□□ -1.46
NMD5YJR132W ANB1P19211 157 aa5.91□□□□□ -1.46
NMD5YJR132W COX10P21592 462 aa5.91□□□□□ -1.46
NMD5YJR132W LRE1P25579 583 aaKnown RBP5.91□□□□□ -1.46
NMD5YJR132W ATG8P38182 117 aaRIP-Chip data5.91□□□□□ -1.46not detected
NMD5YJR132W YIL059CP40520 121 aa5.91□□□□□ -1.46
NMD5YJR132W SFT1P43682 97 aa5.91□□□□□ -1.46
NMD5YJR132W OST2P46964 130 aa5.91□□□□□ -1.46
NMD5YJR132W SDC1Q03323 175 aa5.91□□□□□ -1.46
NMD5YJR132W HEM25Q07534 307 aa5.91□□□□□ -1.46
NMD5YJR132W ORT1Q12375 292 aa5.91□□□□□ -1.46
NMD5YJR132W YNR034W-AQ3E841 98 aa5.91□□□□□ -1.46
NMD5YJR132W HMS2P47175 358 aa5.9□□□□□ -1.46
NMD5YJR132W MLP1Q02455 1875 aaKnown RBP5.9□□□□□ -1.46
NMD5YJR132W PAI3P01094 68 aa5.9□□□□□ -1.46
NMD5YJR132W MRS1P07266 363 aa5.9□□□□□ -1.46
NMD5YJR132W INO4P13902 151 aa5.9□□□□□ -1.46
NMD5YJR132W GEP4P38812 185 aa5.9□□□□□ -1.46
NMD5YJR132W GCV1P48015 400 aa5.9□□□□□ -1.46
NMD5YJR132W MTC7P32633 139 aa5.9□□□□□ -1.47
NMD5YJR132W TEM1P38987 245 aa5.9□□□□□ -1.47
NMD5YJR132W PFS2P42841 465 aaKnown RBP5.9□□□□□ -1.47
NMD5YJR132W SNO3P43544 222 aa5.9□□□□□ -1.47
NMD5YJR132W MCM22P47167 239 aa5.9□□□□□ -1.47
NMD5YJR132W HNT2P49775 206 aa5.9□□□□□ -1.47
NMD5YJR132W SNO2P53823 222 aa5.9□□□□□ -1.47
NMD5YJR132W PDR17P53844 350 aa5.9□□□□□ -1.47
NMD5YJR132W IGO2Q9P305 131 aa5.9□□□□□ -1.47
NMD5YJR132W MSW1P04803 379 aa5.89□□□□□ -1.47
NMD5YJR132W VAC17P25591 423 aa5.89□□□□□ -1.47
NMD5YJR132W MIG1P27705 504 aa5.89□□□□□ -1.47
NMD5YJR132W GET2P40056 285 aa5.89□□□□□ -1.47
NMD5YJR132W PRY1P47032 299 aa5.89□□□□□ -1.47
NMD5YJR132W NUP188P52593 1655 aaKnown RBP5.89□□□□□ -1.47
NMD5YJR132W PBI2P0CT04 75 aaKnown RBP5.89□□□□□ -1.47
NMD5YJR132W DAT1P13483 248 aaKnown RBP5.89□□□□□ -1.47
NMD5YJR132W SYS1P41544 203 aa5.89□□□□□ -1.47
NMD5YJR132W CYT2Q00873 224 aa5.89□□□□□ -1.47
NMD5YJR132W GRX5Q02784 150 aa5.89□□□□□ -1.47
NMD5YJR132W RCE1Q03530 315 aa5.89□□□□□ -1.47
NMD5YJR132W YMR166CQ03829 368 aa5.89□□□□□ -1.47
NMD5YJR132W PBP4Q07362 185 aaKnown RBP5.89□□□□□ -1.47
NMD5YJR132W YPQ1Q12010 308 aa5.89□□□□□ -1.47
NMD5YJR132W YNL320WP42840 284 aa5.88□□□□□ -1.47
NMD5YJR132W CAB4P53332 305 aa5.88□□□□□ -1.47
NMD5YJR132W NAT3Q06504 195 aa5.88□□□□□ -1.47
NMD5YJR132W ASA1Q06822 443 aa5.88□□□□□ -1.47
NMD5YJR132W NAT5Q08689 176 aa5.88□□□□□ -1.47
NMD5YJR132W YPL245WQ12179 454 aaKnown RBP5.88□□□□□ -1.47
NMD5YJR132W YCR090CP25654 182 aaKnown RBP5.88□□□□□ -1.47
NMD5YJR132W FMP46P36141 133 aaKnown RBP5.88□□□□□ -1.47
NMD5YJR132W YBR032WP38223 100 aa5.88□□□□□ -1.47
NMD5YJR132W GON7P46984 123 aa5.88□□□□□ -1.47
NMD5YJR132W YIF1P53845 314 aaKnown RBP5.88□□□□□ -1.47
NMD5YJR132W RSM10Q03201 203 aa5.88□□□□□ -1.47
NMD5YJR132W BET5Q03630 159 aa5.88□□□□□ -1.47
NMD5YJR132W YDR215CQ12240 137 aa5.88□□□□□ -1.47
NMD5YJR132W BOL1Q3E793 110 aa5.88□□□□□ -1.47
NMD5YJR132W TY1A-HP0C2I4 478 aaKnown RBP5.88□□□□□ -1.47
NMD5YJR132W APQ12P40532 138 aa5.88□□□□□ -1.47
NMD5YJR132W UTP15Q04305 513 aaKnown RBP5.88□□□□□ -1.47
NMD5YJR132W FCY1Q12178 158 aa5.88□□□□□ -1.47
NMD5YJR132W HUT1Q12520 339 aa5.88□□□□□ -1.47
NMD5YJR132W VMA9Q3E7B6 73 aa5.88□□□□□ -1.47
NMD5YJR132W PUP3P25451 205 aaKnown RBP5.87□□□□□ -1.47
NMD5YJR132W RFA2P26754 273 aaKnown RBP5.87□□□□□ -1.47
NMD5YJR132W ECM15P35195 104 aa5.87□□□□□ -1.47
NMD5YJR132W HMF1P40037 129 aaKnown RBP5.87□□□□□ -1.47
NMD5YJR132W YFL065CP43539 102 aa5.87□□□□□ -1.47
NMD5YJR132W ATG18P43601 500 aa5.87□□□□□ -1.47
NMD5YJR132W SDT1P53078 280 aa5.87□□□□□ -1.47
NMD5YJR132W VPS71Q03433 280 aa5.87□□□□□ -1.47
NMD5YJR132W YPR203WQ08994 102 aa5.87□□□□□ -1.47
NMD5YJR132W TY4B-JP47024 1803 aa5.87□□□□□ -1.47
NMD5YJR132W MXR2P25566 168 aa5.87□□□□□ -1.47
NMD5YJR132W MRPL11P36521 249 aaPredicted RBP5.87□□□□□ -1.47
NMD5YJR132W AVT7P40501 490 aa5.87□□□□□ -1.47
NMD5YJR132W THG1P53215 237 aaKnown RBP5.87□□□□□ -1.47
NMD5YJR132W YMR317WQ04893 1140 aa5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 96.6 ms