RNA–Protein interactions for RNA: YJR093C

FIP1, Transcript of Subunit of cleavage polyadenylation factor (CPF), yeastyeast

Gene FIP1, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FIP1YJR093C SIR2P06700 562 aa2.13□□□□□ -2.07
FIP1YJR093C URA5P13298 226 aaKnown RBP2.13□□□□□ -2.07
FIP1YJR093C UMP1P38293 148 aa2.13□□□□□ -2.07
FIP1YJR093C AYR1P40471 297 aa2.13□□□□□ -2.07
FIP1YJR093C GVP36P40531 326 aaKnown RBP2.13□□□□□ -2.07
FIP1YJR093C EAF6P47128 113 aa2.13□□□□□ -2.07
FIP1YJR093C CHD1P32657 1468 aa2.13□□□□□ -2.07
FIP1YJR093C ERG10P41338 398 aaKnown RBP2.12□□□□□ -2.07
FIP1YJR093C YDR274CP87283 123 aa2.12□□□□□ -2.07
FIP1YJR093C BOL1Q3E793 110 aa2.12□□□□□ -2.07
FIP1YJR093C CPA1P07258 411 aaKnown RBP2.11□□□□□ -2.07
FIP1YJR093C ASF2P32448 525 aaPredicted RBP2.11□□□□□ -2.07
FIP1YJR093C DSE2P38844 325 aa2.11□□□□□ -2.07
FIP1YJR093C SVP26P38869 228 aa2.11□□□□□ -2.07
FIP1YJR093C LSM4P40070 187 aaKnown RBP2.11□□□□□ -2.07
FIP1YJR093C YNL217WP40152 326 aa2.11□□□□□ -2.07
FIP1YJR093C ATG38Q05789 226 aaKnown RBP2.11□□□□□ -2.07
FIP1YJR093C IGO2Q9P305 131 aa2.11□□□□□ -2.07
FIP1YJR093C YET1P35723 206 aa2.1□□□□□ -2.07
FIP1YJR093C PEP8P40335 379 aa2.1□□□□□ -2.07
FIP1YJR093C ARO80Q04052 950 aa2.1□□□□□ -2.07
FIP1YJR093C SML1Q04964 104 aa2.1□□□□□ -2.07
FIP1YJR093C GRE1Q08969 168 aa2.1□□□□□ -2.07
FIP1YJR093C GPM2Q12008 311 aa2.1□□□□□ -2.07
FIP1YJR093C MBF1O14467 151 aaKnown RBP2.09□□□□□ -2.07
FIP1YJR093C CKS1P20486 150 aaKnown RBP2.09□□□□□ -2.07
FIP1YJR093C CNB1P25296 175 aa2.09□□□□□ -2.07
FIP1YJR093C FZF1P32805 299 aa2.09□□□□□ -2.07
FIP1YJR093C SNC2P33328 115 aa2.09□□□□□ -2.07
FIP1YJR093C GLE2P40066 365 aa2.09□□□□□ -2.07
FIP1YJR093C YNL184CP53876 108 aa2.09□□□□□ -2.07
FIP1YJR093C HNT1Q04344 158 aaKnown RBP2.09□□□□□ -2.07
FIP1YJR093C FSF1Q12029 327 aaKnown RBP2.09□□□□□ -2.07
FIP1YJR093C MDH2P22133 377 aa2.08□□□□□ -2.08
FIP1YJR093C OPY1P38271 328 aa2.08□□□□□ -2.08
FIP1YJR093C ARP3P47117 449 aaKnown RBP2.08□□□□□ -2.08
FIP1YJR093C UBC12P52491 188 aa2.08□□□□□ -2.08
FIP1YJR093C OCH1P31755 480 aa2.07□□□□□ -2.08
FIP1YJR093C YBR285WP38354 144 aa2.07□□□□□ -2.08
FIP1YJR093C GAA1P39012 614 aa2.07□□□□□ -2.08
FIP1YJR093C VTC1P40046 129 aaRIP-Chip data2.07□□□□□ -2.08not detected
FIP1YJR093C NOC4Q06512 552 aaPredicted RBP2.07□□□□□ -2.08
FIP1YJR093C YJR111CP47148 283 aaKnown RBP2.06□□□□□ -2.08
FIP1YJR093C BAT2P47176 376 aaKnown RBP2.06□□□□□ -2.08
FIP1YJR093C ARO8P53090 500 aaKnown RBP2.06□□□□□ -2.08
FIP1YJR093C HOP2P53187 214 aa2.06□□□□□ -2.08
FIP1YJR093C MPC3P53311 146 aa2.06□□□□□ -2.08
FIP1YJR093C YBR219CP38317 127 aa2.05□□□□□ -2.08
FIP1YJR093C AVT2P39981 480 aa2.05□□□□□ -2.08
FIP1YJR093C PDS1P40316 373 aaPredicted RBP2.05□□□□□ -2.08
FIP1YJR093C YFR054CP43622 192 aa2.05□□□□□ -2.08
FIP1YJR093C GRX8Q05926 109 aa2.05□□□□□ -2.08
FIP1YJR093C YOL024WQ08172 172 aa2.05□□□□□ -2.08
FIP1YJR093C FLO9P39712 1322 aa2.05□□□□□ -2.08
FIP1YJR093C TAH1P25638 111 aaPredicted RBP2.04□□□□□ -2.08
FIP1YJR093C YCR090CP25654 182 aaKnown RBP2.04□□□□□ -2.08
FIP1YJR093C ATP7P30902 174 aa2.04□□□□□ -2.08
FIP1YJR093C PAN3P36102 679 aaPredicted RBP2.04□□□□□ -2.08
FIP1YJR093C SKI6P46948 246 aaPredicted RBP2.04□□□□□ -2.08
FIP1YJR093C RTC4P53850 401 aa2.04□□□□□ -2.08
FIP1YJR093C BUD25P85052 153 aa2.04□□□□□ -2.08
FIP1YJR093C SNO1Q03144 224 aa2.04□□□□□ -2.08
FIP1YJR093C FUS2Q05670 677 aa2.04□□□□□ -2.08
FIP1YJR093C DGA1Q08650 418 aa2.04□□□□□ -2.08
FIP1YJR093C ATG40Q99325 256 aa2.04□□□□□ -2.08
FIP1YJR093C MET5P47169 1442 aa2.03□□□□□ -2.08
FIP1YJR093C POR1P04840 283 aaKnown RBP2.03□□□□□ -2.08
FIP1YJR093C KDX1P36005 433 aa2.03□□□□□ -2.08
FIP1YJR093C CAF4P36130 643 aa2.03□□□□□ -2.08
FIP1YJR093C YKR045CP36138 183 aa2.03□□□□□ -2.08
FIP1YJR093C YEA4P40004 342 aa2.03□□□□□ -2.08
FIP1YJR093C SER2P42941 309 aa2.03□□□□□ -2.08
FIP1YJR093C NRK1P53915 240 aa2.03□□□□□ -2.08
FIP1YJR093C YOL014WQ08110 124 aa2.03□□□□□ -2.08
FIP1YJR093C RIO1Q12196 484 aaKnown RBP2.03□□□□□ -2.08
FIP1YJR093C BEM2P39960 2167 aaKnown RBP2.02□□□□□ -2.09
FIP1YJR093C SAC3P46674 1301 aa2.02□□□□□ -2.09
FIP1YJR093C YLR236CA0A023PZG4 107 aa2.02□□□□□ -2.09
FIP1YJR093C TRX3P25372 127 aa2.02□□□□□ -2.09
FIP1YJR093C FMP23P38231 175 aa2.02□□□□□ -2.09
FIP1YJR093C VMA22P38784 181 aa2.02□□□□□ -2.09
FIP1YJR093C ODC2Q99297 307 aa2.02□□□□□ -2.09
FIP1YJR093C SNF4P12904 322 aa2.01□□□□□ -2.09
FIP1YJR093C GCY1P14065 312 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
FIP1YJR093C SHE2P36068 246 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
FIP1YJR093C YKR041WP36134 250 aa2.01□□□□□ -2.09
FIP1YJR093C POP3P53833 195 aaPredicted RBP2.01□□□□□ -2.09
FIP1YJR093C YMR099CQ03161 297 aaKnown RBP2.01□□□□□ -2.09
FIP1YJR093C YLR162WQ06235 118 aa2.01□□□□□ -2.09
FIP1YJR093C YLR036CQ07986 203 aa2.01□□□□□ -2.09
FIP1YJR093C BRX1Q08235 291 aaKnown RBP2.01□□□□□ -2.09
FIP1YJR093C SPO13P23624 291 aa2□□□□□ -2.09
FIP1YJR093C YBR209WP38311 105 aa2□□□□□ -2.09
FIP1YJR093C SHG1P38337 142 aa2□□□□□ -2.09
FIP1YJR093C AIM2P39721 246 aa2□□□□□ -2.09
FIP1YJR093C SEC72P39742 193 aaKnown RBP2□□□□□ -2.09
FIP1YJR093C POG1P40473 351 aa2□□□□□ -2.09
FIP1YJR093C ERJ5P43613 295 aaPredicted RBP2□□□□□ -2.09
FIP1YJR093C KNH1P50112 268 aa2□□□□□ -2.09
FIP1YJR093C SAY1P53324 424 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms