RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W UTP23Q12339 254 aaKnown RBP2.22□□□□□ -2.05
TRA1YHR099W YCR007CP25354 239 aa2.21□□□□□ -2.05
TRA1YHR099W YBR241CP38142 488 aa2.21□□□□□ -2.05
TRA1YHR099W LYS1P38998 373 aaRIP-Chip data2.21□□□□□ -2.05not detected
TRA1YHR099W YJL007CP47080 104 aa2.21□□□□□ -2.05
TRA1YHR099W HHO1P53551 258 aa2.21□□□□□ -2.05
TRA1YHR099W TIM8P57744 87 aa2.21□□□□□ -2.05
TRA1YHR099W MTQ2Q03920 221 aaPredicted RBP2.21□□□□□ -2.05
TRA1YHR099W SIR2P06700 562 aa2.21□□□□□ -2.06
TRA1YHR099W COQ2P32378 372 aa2.21□□□□□ -2.06
TRA1YHR099W YBL059WP34224 193 aa2.21□□□□□ -2.06
TRA1YHR099W GCS1P35197 352 aa2.21□□□□□ -2.06
TRA1YHR099W ASC1P38011 319 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W YMR034CQ05131 434 aaPredicted RBP2.21□□□□□ -2.06
TRA1YHR099W RAX2Q12465 1220 aa2.21□□□□□ -2.06
TRA1YHR099W RPL12AP0CX53 165 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W RPL12BP0CX54 165 aa2.21□□□□□ -2.06
TRA1YHR099W LRO1P40345 661 aa2.21□□□□□ -2.06
TRA1YHR099W URM1P40554 99 aaPredicted RBP2.21□□□□□ -2.06
TRA1YHR099W TIS11P47977 285 aa2.21□□□□□ -2.06
TRA1YHR099W GLO1P50107 326 aa2.21□□□□□ -2.06
TRA1YHR099W CAC2Q04199 468 aa2.21□□□□□ -2.06
TRA1YHR099W AEP3Q12089 606 aa2.21□□□□□ -2.06
TRA1YHR099W MPD1Q12404 318 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W FOL3Q12676 427 aaPredicted RBP2.21□□□□□ -2.06
TRA1YHR099W TMA7Q3E764 64 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W HUB1Q6Q546 73 aa2.21□□□□□ -2.06
TRA1YHR099W MRPL44P19956 98 aa2.21□□□□□ -2.06
TRA1YHR099W GLC7P32598 312 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W PAU24P38155 120 aa2.21□□□□□ -2.06
TRA1YHR099W SUT1P53032 299 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W YML018CQ03730 393 aa2.21□□□□□ -2.06
TRA1YHR099W API2Q04413 109 aa2.21□□□□□ -2.06
TRA1YHR099W RRG7Q08774 242 aaPredicted RBP2.21□□□□□ -2.06
TRA1YHR099W RMP1Q12530 201 aa2.21□□□□□ -2.06
TRA1YHR099W BI3Q9ZZW7 517 aa2.21□□□□□ -2.06
TRA1YHR099W PAU3P25610 124 aa2.21□□□□□ -2.06
TRA1YHR099W CLG1P35190 452 aa2.21□□□□□ -2.06
TRA1YHR099W PCL5P38794 229 aa2.21□□□□□ -2.06
TRA1YHR099W GEP4P38812 185 aa2.21□□□□□ -2.06
TRA1YHR099W WSS1P38838 269 aa2.21□□□□□ -2.06
TRA1YHR099W YNL200CP40165 246 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W YIR035CP40579 254 aa2.21□□□□□ -2.06
TRA1YHR099W RNH201P53942 307 aa2.21□□□□□ -2.06
TRA1YHR099W YOR376WQ08900 122 aa2.21□□□□□ -2.06
TRA1YHR099W RAD28Q12021 506 aa2.21□□□□□ -2.06
TRA1YHR099W YML003WP0CF16 290 aa2.21□□□□□ -2.06
TRA1YHR099W SAF1P38352 637 aa2.21□□□□□ -2.06
TRA1YHR099W DAN4P47179 1161 aa2.21□□□□□ -2.06
TRA1YHR099W BOL2P53082 120 aa2.21□□□□□ -2.06
TRA1YHR099W ALO1P54783 526 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W OLI1P61829 76 aa2.21□□□□□ -2.06
TRA1YHR099W YDR102CQ03864 110 aa2.21□□□□□ -2.06
TRA1YHR099W GPI11Q06636 219 aa2.21□□□□□ -2.06
TRA1YHR099W RAF1Q06891 181 aa2.21□□□□□ -2.06
TRA1YHR099W BGL2P15703 313 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W UME6P39001 836 aa2.21□□□□□ -2.06
TRA1YHR099W TIF34P40217 347 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W YNL234WP53857 426 aa2.21□□□□□ -2.06
TRA1YHR099W ASM4Q05166 528 aa2.21□□□□□ -2.06
TRA1YHR099W YPR147CQ06522 304 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W PFA4Q12006 378 aa2.21□□□□□ -2.06
TRA1YHR099W KRE1P17260 313 aa2.21□□□□□ -2.06
TRA1YHR099W PAU2P32612 120 aa2.21□□□□□ -2.06
TRA1YHR099W PEP8P40335 379 aa2.21□□□□□ -2.06
TRA1YHR099W YIL108WP40483 696 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W SGF73P53165 657 aa2.21□□□□□ -2.06
TRA1YHR099W SWS2P53937 143 aa2.21□□□□□ -2.06
TRA1YHR099W BNI1P41832 1953 aa2.21□□□□□ -2.06
TRA1YHR099W PHO80P20052 293 aa2.21□□□□□ -2.06
TRA1YHR099W RPD3P32561 433 aa2.21□□□□□ -2.06
TRA1YHR099W YKR051WP36142 418 aa2.21□□□□□ -2.06
TRA1YHR099W ECM33P38248 429 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W GOS1P38736 223 aa2.21□□□□□ -2.06
TRA1YHR099W RPL10P41805 221 aaKnown RBP2.21□□□□□ -2.06
TRA1YHR099W ZRT1P32804 376 aa2.2□□□□□ -2.06
TRA1YHR099W YEL068CP39977 110 aa2.2□□□□□ -2.06
TRA1YHR099W RRT13P40042 185 aa2.2□□□□□ -2.06
TRA1YHR099W SMA1Q02651 245 aa2.2□□□□□ -2.06
TRA1YHR099W YDL180WQ12301 547 aa2.2□□□□□ -2.06
TRA1YHR099W CSR2Q12734 1121 aa2.2□□□□□ -2.06
TRA1YHR099W YHR213W-AQ8TGT4 77 aa2.2□□□□□ -2.06
TRA1YHR099W ERV1P27882 189 aa2.2□□□□□ -2.06
TRA1YHR099W IST3P40565 148 aaPredicted RBP2.2□□□□□ -2.06
TRA1YHR099W YIR016WP40572 265 aa2.2□□□□□ -2.06
TRA1YHR099W SFT1P43682 97 aa2.2□□□□□ -2.06
TRA1YHR099W SOK2P53438 785 aaPredicted RBP2.2□□□□□ -2.06
TRA1YHR099W RPL21AQ02753 160 aaKnown RBP2.2□□□□□ -2.06
TRA1YHR099W RPL21BQ12672 160 aaKnown RBP2.2□□□□□ -2.06
TRA1YHR099W MDH2P22133 377 aa2.2□□□□□ -2.06
TRA1YHR099W VMA3P25515 160 aa2.2□□□□□ -2.06
TRA1YHR099W VBA3P25594 458 aa2.2□□□□□ -2.06
TRA1YHR099W EMP24P32803 203 aaKnown RBP2.2□□□□□ -2.06
TRA1YHR099W YJL163CP46996 555 aa2.2□□□□□ -2.06
TRA1YHR099W SUR7P54003 302 aa2.2□□□□□ -2.06
TRA1YHR099W GCY1P14065 312 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
TRA1YHR099W YCR041WP37265 110 aa2.2□□□□□ -2.06
TRA1YHR099W YIL152WP40455 235 aa2.2□□□□□ -2.06
TRA1YHR099W TTI2P47168 421 aa2.2□□□□□ -2.06
TRA1YHR099W YGL185CP53100 379 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 87.2 ms