RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VMA21, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA21	YGR105W	YGR050C	P53231	118 aa		0.8	□□□□□ -2.28
VMA21	YGR105W	YHR007C-A	Q07074	71 aa		0.8	□□□□□ -2.28
VMA21	YGR105W	FAS1	P07149	2051 aa	Known RBP	0.8	□□□□□ -2.28
VMA21	YGR105W	RPL27A	P0C2H6	136 aa	Known RBP	0.79	□□□□□ -2.28
VMA21	YGR105W	ATP15	P21306	62 aa		0.79	□□□□□ -2.28
VMA21	YGR105W	PTM1	P32857	523 aa		0.79	□□□□□ -2.28
VMA21	YGR105W	EDC3	P39998	551 aa	Known RBP	0.79	□□□□□ -2.28
VMA21	YGR105W	YER085C	P40058	173 aa		0.79	□□□□□ -2.28
VMA21	YGR105W	RPB3	P16370	318 aa	Known RBP	0.78	□□□□□ -2.28
VMA21	YGR105W	RPL24B	P24000	155 aa	Known RBP	0.78	□□□□□ -2.28
VMA21	YGR105W	MGM101	P32787	269 aa	Known RBP	0.78	□□□□□ -2.28
VMA21	YGR105W	YNL247W	P53852	767 aa	Known RBP	0.78	□□□□□ -2.28
VMA21	YGR105W	CWC27	Q02770	301 aa		0.78	□□□□□ -2.28
VMA21	YGR105W	PET191	Q02772	108 aa		0.78	□□□□□ -2.28
VMA21	YGR105W	YOL160W	Q08321	113 aa		0.78	□□□□□ -2.28
VMA21	YGR105W	SEC4	P07560	215 aa	Known RBP	0.77	□□□□□ -2.29
VMA21	YGR105W	YHL042W	P38729	150 aa		0.77	□□□□□ -2.29
VMA21	YGR105W	RTC3	P38804	111 aa	Predicted RBP	0.77	□□□□□ -2.29
VMA21	YGR105W	GCN3	P14741	305 aa		0.76	□□□□□ -2.29
VMA21	YGR105W	PPA2	P28239	310 aa		0.76	□□□□□ -2.29
VMA21	YGR105W	YER034W	P40022	185 aa	Known RBP	0.76	□□□□□ -2.29
VMA21	YGR105W	YPL073C	P40323	161 aa		0.76	□□□□□ -2.29
VMA21	YGR105W	HYR1	P40581	163 aa	Known RBP	0.76	□□□□□ -2.29
VMA21	YGR105W	AIM36	Q03798	255 aa		0.76	□□□□□ -2.29
VMA21	YGR105W	YKL183C-A	Q3E765	70 aa		0.76	□□□□□ -2.29
VMA21	YGR105W	MDM35	O60200	86 aa		0.75	□□□□□ -2.29
VMA21	YGR105W	PRX1	P34227	261 aa	Known RBP	0.75	□□□□□ -2.29
VMA21	YGR105W	TVP23	P38962	199 aa		0.75	□□□□□ -2.29
VMA21	YGR105W	ADO1	P47143	340 aa	Known RBP	0.75	□□□□□ -2.29
VMA21	YGR105W	MPC3	P53311	146 aa		0.75	□□□□□ -2.29
VMA21	YGR105W	PDR17	P53844	350 aa		0.75	□□□□□ -2.29
VMA21	YGR105W	YRA1	Q12159	226 aa	Known RBP	0.75	□□□□□ -2.29
VMA21	YGR105W	SEY1	Q99287	776 aa		0.75	□□□□□ -2.29
VMA21	YGR105W	YBR121C-A	P0C5L4	52 aa		0.74	□□□□□ -2.29
VMA21	YGR105W	SPO13	P23624	291 aa		0.74	□□□□□ -2.29
VMA21	YGR105W	MGA1	P53050	456 aa		0.74	□□□□□ -2.29
VMA21	YGR105W	YPR174C	Q06616	221 aa	Predicted RBP	0.74	□□□□□ -2.29
VMA21	YGR105W	JLP1	Q12358	412 aa		0.74	□□□□□ -2.29
VMA21	YGR105W	ERG28	P40030	148 aa		0.73	□□□□□ -2.29
VMA21	YGR105W	YFH7	P43591	353 aa		0.73	□□□□□ -2.29
VMA21	YGR105W	COG5	P53951	403 aa		0.73	□□□□□ -2.29
VMA21	YGR105W	YNG1	Q08465	219 aa		0.73	□□□□□ -2.29
VMA21	YGR105W	CKS1	P20486	150 aa	Known RBP	0.72	□□□□□ -2.29
VMA21	YGR105W	YCL042W	P25572	119 aa		0.72	□□□□□ -2.29
VMA21	YGR105W	YNL194C	P40169	301 aa		0.72	□□□□□ -2.29
VMA21	YGR105W	LSM7	P53905	115 aa	Known RBP	0.72	□□□□□ -2.29
VMA21	YGR105W	YMR252C	Q04814	134 aa		0.72	□□□□□ -2.29
VMA21	YGR105W	RPL25	P04456	142 aa	Known RBP	0.71	□□□□□ -2.3
VMA21	YGR105W	POR1	P04840	283 aa	Known RBP	0.71	□□□□□ -2.3
VMA21	YGR105W	CBT1	P36038	271 aa	Predicted RBP	0.71	□□□□□ -2.3
VMA21	YGR105W	YEL008W	P40001	126 aa		0.71	□□□□□ -2.3
VMA21	YGR105W	RTR1	P40084	226 aa	Predicted RBP	0.71	□□□□□ -2.3
VMA21	YGR105W	IRC18	P47056	224 aa		0.71	□□□□□ -2.3
VMA21	YGR105W	DGA1	Q08650	418 aa		0.71	□□□□□ -2.3
VMA21	YGR105W	YDR157W	A0A023PZE8	133 aa		0.7	□□□□□ -2.3
VMA21	YGR105W	NHP6B	P11633	99 aa	Known RBP	0.7	□□□□□ -2.3
VMA21	YGR105W	MER1	P16523	270 aa		0.7	□□□□□ -2.3
VMA21	YGR105W	MAG1	P22134	296 aa	Known RBP	0.7	□□□□□ -2.3
VMA21	YGR105W	HNT1	Q04344	158 aa	Known RBP	0.7	□□□□□ -2.3
VMA21	YGR105W	ODC2	Q99297	307 aa		0.7	□□□□□ -2.3
VMA21	YGR105W	IKI3	Q06706	1349 aa	Known RBP	0.69	□□□□□ -2.3
VMA21	YGR105W	SPS18	P32572	300 aa		0.69	□□□□□ -2.3
VMA21	YGR105W	BMH2	P34730	273 aa	Known RBP	0.69	□□□□□ -2.3
VMA21	YGR105W	OTU1	P43558	301 aa		0.69	□□□□□ -2.3
VMA21	YGR105W	YHL018W	P38744	120 aa	Predicted RBP	0.68	□□□□□ -2.3
VMA21	YGR105W	YRB1	P41920	201 aa	Known RBP	0.68	□□□□□ -2.3
VMA21	YGR105W	RAD17	P48581	401 aa		0.68	□□□□□ -2.3
VMA21	YGR105W	GET1	P53192	235 aa		0.68	□□□□□ -2.3
VMA21	YGR105W	MDM32	Q12171	622 aa		0.68	□□□□□ -2.3
VMA21	YGR105W	OCH1	P31755	480 aa		0.67	□□□□□ -2.3
VMA21	YGR105W	PAN3	P36102	679 aa	Predicted RBP	0.67	□□□□□ -2.3
VMA21	YGR105W	ECM4	P36156	370 aa		0.67	□□□□□ -2.3
VMA21	YGR105W	TRM5	P38793	499 aa		0.67	□□□□□ -2.3
VMA21	YGR105W	HMF1	P40037	129 aa	Known RBP	0.67	□□□□□ -2.3
VMA21	YGR105W	STE18	P18852	110 aa		0.66	□□□□□ -2.3
VMA21	YGR105W	PRP18	P33411	251 aa	Predicted RBP	0.66	□□□□□ -2.3
VMA21	YGR105W	HPA3	P39979	161 aa		0.66	□□□□□ -2.3
VMA21	YGR105W	ERG10	P41338	398 aa	Known RBP	0.66	□□□□□ -2.3
VMA21	YGR105W	CWC23	P52868	283 aa	Predicted RBP	0.66	□□□□□ -2.3
VMA21	YGR105W	IRC23	Q08416	157 aa		0.66	□□□□□ -2.3
VMA21	YGR105W	FIT2	Q08906	153 aa		0.66	□□□□□ -2.3
VMA21	YGR105W	CDC33	P07260	213 aa	Known RBP	0.65	□□□□□ -2.31
VMA21	YGR105W	COQ1	P18900	473 aa		0.65	□□□□□ -2.31
VMA21	YGR105W	AIM25	P47140	327 aa		0.65	□□□□□ -2.31
VMA21	YGR105W	YLR460C	P54007	376 aa		0.65	□□□□□ -2.31
VMA21	YGR105W	DAD4	P69851	72 aa		0.65	□□□□□ -2.31
VMA21	YGR105W	DIG2	Q03373	323 aa	Known RBP	0.65	□□□□□ -2.31
VMA21	YGR105W	RNH202	Q05635	350 aa		0.65	□□□□□ -2.31
VMA21	YGR105W	LCL2	Q08045	131 aa		0.65	□□□□□ -2.31
VMA21	YGR105W	COA3	Q3E7B2	85 aa		0.65	□□□□□ -2.31
VMA21	YGR105W	COX8	P04039	78 aa		0.64	□□□□□ -2.31
VMA21	YGR105W	STP22	P25604	385 aa		0.64	□□□□□ -2.31
VMA21	YGR105W	YCR090C	P25654	182 aa	Known RBP	0.64	□□□□□ -2.31
VMA21	YGR105W	YCR087C-A	P37263	153 aa		0.64	□□□□□ -2.31
VMA21	YGR105W	YEA4	P40004	342 aa		0.64	□□□□□ -2.31
VMA21	YGR105W	YMR099C	Q03161	297 aa	Known RBP	0.64	□□□□□ -2.31
VMA21	YGR105W	GGA1	Q06336	557 aa		0.64	□□□□□ -2.31
VMA21	YGR105W	PRP11	Q07350	266 aa	Predicted RBP	0.64	□□□□□ -2.31
VMA21	YGR105W	NCB2	Q92317	146 aa		0.64	□□□□□ -2.31
VMA21	YGR105W	CDC36	P06100	191 aa	Predicted RBP	0.63	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms