RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W YOL073CQ08232 322 aa3.35□□□□□ -1.87
CHD1YER164W CET1O13297 549 aaPredicted RBP3.35□□□□□ -1.87
CHD1YER164W DPM1P14020 267 aaKnown RBP3.35□□□□□ -1.87
CHD1YER164W TIR2P33890 251 aa3.35□□□□□ -1.87
CHD1YER164W YBR096WP38256 230 aa3.35□□□□□ -1.87
CHD1YER164W AIR1P40507 360 aaKnown RBP3.35□□□□□ -1.87
CHD1YER164W CTK2P46962 323 aa3.35□□□□□ -1.87
CHD1YER164W TPC1P53257 314 aa3.35□□□□□ -1.87
CHD1YER164W TPP1Q03796 238 aa3.35□□□□□ -1.87
CHD1YER164W MES1P00958 751 aaKnown RBP3.35□□□□□ -1.87
CHD1YER164W GAL7P08431 366 aa3.35□□□□□ -1.87
CHD1YER164W MEK1P24719 497 aaPredicted RBP3.35□□□□□ -1.87
CHD1YER164W EMP24P32803 203 aaKnown RBP3.35□□□□□ -1.87
CHD1YER164W SOF1P33750 489 aaKnown RBP3.35□□□□□ -1.87
CHD1YER164W OYE3P41816 400 aaPredicted RBP3.35□□□□□ -1.87
CHD1YER164W YGL118CP53132 145 aa3.35□□□□□ -1.87
CHD1YER164W YGR126WP53274 230 aa3.35□□□□□ -1.87
CHD1YER164W OCA2P53949 197 aa3.35□□□□□ -1.87
CHD1YER164W ATC1Q04005 294 aa3.35□□□□□ -1.87
CHD1YER164W XYL2Q07993 356 aa3.35□□□□□ -1.87
CHD1YER164W ALG6Q12001 544 aaKnown RBP3.35□□□□□ -1.87
CHD1YER164W ISU2Q12056 156 aa3.35□□□□□ -1.87
CHD1YER164W TRA1P38811 3744 aa3.35□□□□□ -1.87
CHD1YER164W MRP49P32388 137 aa3.35□□□□□ -1.87
CHD1YER164W OTU1P43558 301 aa3.35□□□□□ -1.87
CHD1YER164W HIT1P46973 164 aa3.35□□□□□ -1.87
CHD1YER164W YGR149WP48236 432 aa3.35□□□□□ -1.87
CHD1YER164W YMR310CQ04867 317 aaPredicted RBP3.35□□□□□ -1.87
CHD1YER164W PAL1Q05518 499 aaKnown RBP3.35□□□□□ -1.87
CHD1YER164W YLR030WQ07967 263 aa3.35□□□□□ -1.87
CHD1YER164W COX2P00410 251 aa3.34□□□□□ -1.87
CHD1YER164W WSC4P38739 605 aa3.34□□□□□ -1.87
CHD1YER164W POP1P41812 875 aa3.34□□□□□ -1.87
CHD1YER164W TNA1P53322 534 aa3.34□□□□□ -1.87
CHD1YER164W DAP1Q12091 152 aa3.34□□□□□ -1.87
CHD1YER164W Q0142Q9ZZW4 58 aa3.34□□□□□ -1.87
CHD1YER164W SAG1P20840 650 aa3.34□□□□□ -1.87
CHD1YER164W ELO2P25358 347 aa3.34□□□□□ -1.87
CHD1YER164W GSP2P32836 220 aaKnown RBP3.34□□□□□ -1.87
CHD1YER164W YKL071WP36086 256 aa3.34□□□□□ -1.87
CHD1YER164W PRE5P40302 234 aaKnown RBP3.34□□□□□ -1.87
CHD1YER164W TAX4P47030 604 aa3.34□□□□□ -1.87
CHD1YER164W EOS1P53938 366 aa3.34□□□□□ -1.87
CHD1YER164W SWT1Q12104 458 aa3.34□□□□□ -1.87
CHD1YER164W Q0144Q9ZZW2 109 aa3.34□□□□□ -1.87
CHD1YER164W RPL9AP05738 191 aaKnown RBP3.34□□□□□ -1.88
CHD1YER164W GAS1P22146 559 aaKnown RBP3.34□□□□□ -1.88
CHD1YER164W HSP12P22943 109 aaKnown RBP3.34□□□□□ -1.88
CHD1YER164W SRX1P36077 127 aa3.34□□□□□ -1.88
CHD1YER164W SDS24P38314 527 aa3.34□□□□□ -1.88
CHD1YER164W PSD1P39006 500 aa3.34□□□□□ -1.88
CHD1YER164W LTP1P40347 161 aa3.34□□□□□ -1.88
CHD1YER164W YJR012CP47087 207 aa3.34□□□□□ -1.88
CHD1YER164W RPL9BP51401 191 aaKnown RBP3.34□□□□□ -1.88
CHD1YER164W YGL204CP53089 101 aa3.34□□□□□ -1.88
CHD1YER164W COX19Q3E731 98 aa3.34□□□□□ -1.88
CHD1YER164W CBS1P14066 229 aa3.33□□□□□ -1.88
CHD1YER164W NOP1P15646 327 aaKnown RBP3.33□□□□□ -1.88
CHD1YER164W PRO1P32264 428 aa3.33□□□□□ -1.88
CHD1YER164W ATG27P46989 271 aa3.33□□□□□ -1.88
CHD1YER164W UBC9P50623 157 aaPredicted RBP3.33□□□□□ -1.88
CHD1YER164W CAB4P53332 305 aa3.33□□□□□ -1.88
CHD1YER164W YNR048WP53740 393 aa3.33□□□□□ -1.88
CHD1YER164W MRPL51Q06090 140 aaPredicted RBP3.33□□□□□ -1.88
CHD1YER164W YOR385WQ08909 290 aa3.33□□□□□ -1.88
CHD1YER164W FSF1Q12029 327 aaKnown RBP3.33□□□□□ -1.88
CHD1YER164W ADH2P00331 348 aaKnown RBP3.33□□□□□ -1.88
CHD1YER164W CTA1P15202 515 aa3.33□□□□□ -1.88
CHD1YER164W YKL187CP34231 750 aa3.33□□□□□ -1.88
CHD1YER164W SMK1P41808 388 aa3.33□□□□□ -1.88
CHD1YER164W YJL163CP46996 555 aa3.33□□□□□ -1.88
CHD1YER164W STD1Q02794 444 aa3.33□□□□□ -1.88
CHD1YER164W YDR286CQ05530 114 aa3.33□□□□□ -1.88
CHD1YER164W ORT1Q12375 292 aa3.33□□□□□ -1.88
CHD1YER164W YPR015CQ12531 247 aa3.33□□□□□ -1.88
CHD1YER164W DET1Q99288 334 aaKnown RBP3.33□□□□□ -1.88
CHD1YER164W ATG40Q99325 256 aa3.33□□□□□ -1.88
CHD1YER164W RPL35AP0CX84 120 aaKnown RBP3.33□□□□□ -1.88
CHD1YER164W RPL35BP0CX85 120 aaKnown RBP3.33□□□□□ -1.88
CHD1YER164W PCL1P24867 279 aa3.33□□□□□ -1.88
CHD1YER164W GLC7P32598 312 aaKnown RBP3.33□□□□□ -1.88
CHD1YER164W SPG5P42933 373 aa3.33□□□□□ -1.88
CHD1YER164W LSB3P43603 459 aaKnown RBP3.33□□□□□ -1.88
CHD1YER164W TDA4P47153 279 aa3.33□□□□□ -1.88
CHD1YER164W CRZ1P53968 678 aa3.33□□□□□ -1.88
CHD1YER164W LOA1Q06508 300 aa3.33□□□□□ -1.88
CHD1YER164W YDL242WQ07746 117 aa3.33□□□□□ -1.88
CHD1YER164W IRC19Q07843 230 aa3.33□□□□□ -1.88
CHD1YER164W FRE8Q12209 686 aa3.33□□□□□ -1.88
CHD1YER164W ATG5Q12380 294 aa3.33□□□□□ -1.88
CHD1YER164W PAD1P33751 242 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
CHD1YER164W YFR054CP43622 192 aa3.33□□□□□ -1.88
CHD1YER164W NAM8Q00539 523 aaKnown RBP3.33□□□□□ -1.88
CHD1YER164W RIM9Q04734 239 aa3.33□□□□□ -1.88
CHD1YER164W YMR253CQ04835 414 aa3.33□□□□□ -1.88
CHD1YER164W HRI1Q05905 244 aaKnown RBP3.33□□□□□ -1.88
CHD1YER164W PIN3Q06449 215 aa3.33□□□□□ -1.88
CHD1YER164W PAU23Q07987 124 aa3.33□□□□□ -1.88
CHD1YER164W PAU17Q12370 124 aa3.33□□□□□ -1.88
CHD1YER164W TEL1P38110 2787 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms