RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W YGR050CP53231 118 aa1.78□□□□□ -2.12
RPN9YDR427W BUD25P85052 153 aa1.78□□□□□ -2.12
RPN9YDR427W TY1B-JR2P47100 1755 aaKnown RBP1.77□□□□□ -2.13
RPN9YDR427W TY1B-ER2Q03619 1755 aa1.77□□□□□ -2.13
RPN9YDR427W TY1B-MR1Q04214 1755 aa1.77□□□□□ -2.13
RPN9YDR427W TY1B-MR2Q04670 1755 aaKnown RBP1.77□□□□□ -2.13
RPN9YDR427W TY1B-LR1Q12088 1755 aaKnown RBP1.77□□□□□ -2.13
RPN9YDR427W TY1B-NL1Q12112 1755 aa1.77□□□□□ -2.13
RPN9YDR427W TY1B-GR1Q12141 1755 aa1.77□□□□□ -2.13
RPN9YDR427W TY1B-BLQ12490 1755 aa1.77□□□□□ -2.13
RPN9YDR427W CDC36P06100 191 aaPredicted RBP1.77□□□□□ -2.13
RPN9YDR427W SML1Q04964 104 aa1.77□□□□□ -2.13
RPN9YDR427W RPA190P10964 1664 aaKnown RBP1.77□□□□□ -2.13
RPN9YDR427W NTE1Q04958 1679 aa1.77□□□□□ -2.13
RPN9YDR427W BPT1P14772 1559 aa1.76□□□□□ -2.13
RPN9YDR427W RKR1Q04781 1562 aa1.76□□□□□ -2.13
RPN9YDR427W YPK9Q12697 1472 aa1.76□□□□□ -2.13
RPN9YDR427W TUS1Q06412 1307 aa1.76□□□□□ -2.13
RPN9YDR427W TIM9O74700 87 aa1.76□□□□□ -2.13
RPN9YDR427W YOL162WP0CF19 215 aa1.76□□□□□ -2.13
RPN9YDR427W MGM101P32787 269 aaKnown RBP1.76□□□□□ -2.13
RPN9YDR427W YKT6P36015 200 aaKnown RBP1.76□□□□□ -2.13
RPN9YDR427W SKG1P36169 355 aa1.76□□□□□ -2.13
RPN9YDR427W UMP1P38293 148 aa1.76□□□□□ -2.13
RPN9YDR427W IKI1P38874 309 aa1.76□□□□□ -2.13
RPN9YDR427W TSC3Q3E790 80 aa1.76□□□□□ -2.13
RPN9YDR427W YHR214C-EQ8TGK0 99 aa1.76□□□□□ -2.13
RPN9YDR427W YCF1P39109 1515 aaKnown RBP1.76□□□□□ -2.13
RPN9YDR427W YGL010WP25338 174 aa1.75□□□□□ -2.13
RPN9YDR427W RFA3P26755 122 aaKnown RBP1.75□□□□□ -2.13
RPN9YDR427W SPS18P32572 300 aa1.75□□□□□ -2.13
RPN9YDR427W YCR087C-AP37263 153 aa1.75□□□□□ -2.13
RPN9YDR427W YBR219CP38317 127 aa1.75□□□□□ -2.13
RPN9YDR427W RMD6P39975 231 aa1.75□□□□□ -2.13
RPN9YDR427W YNL217WP40152 326 aa1.75□□□□□ -2.13
RPN9YDR427W LSM7P53905 115 aaKnown RBP1.75□□□□□ -2.13
RPN9YDR427W YPL162CQ12042 273 aa1.75□□□□□ -2.13
RPN9YDR427W CDC25P04821 1589 aa1.75□□□□□ -2.13
RPN9YDR427W DNF1P32660 1571 aa1.75□□□□□ -2.13
RPN9YDR427W RPO21P04050 1733 aaKnown RBP1.74□□□□□ -2.13
RPN9YDR427W ULS1Q08562 1619 aa1.74□□□□□ -2.13
RPN9YDR427W KSS1P14681 368 aa1.74□□□□□ -2.13
RPN9YDR427W FZF1P32805 299 aa1.74□□□□□ -2.13
RPN9YDR427W PTM1P32857 523 aa1.74□□□□□ -2.13
RPN9YDR427W YET1P35723 206 aa1.74□□□□□ -2.13
RPN9YDR427W YBR220CP38318 560 aa1.74□□□□□ -2.13
RPN9YDR427W GLE2P40066 365 aa1.74□□□□□ -2.13
RPN9YDR427W GVP36P40531 326 aaKnown RBP1.74□□□□□ -2.13
RPN9YDR427W YNR077CP53758 84 aa1.74□□□□□ -2.13
RPN9YDR427W CWC21Q03375 135 aaKnown RBP1.74□□□□□ -2.13
RPN9YDR427W YDR249CQ03787 373 aa1.74□□□□□ -2.13
RPN9YDR427W YNG1Q08465 219 aa1.74□□□□□ -2.13
RPN9YDR427W YRF1-1P0CX20 1796 aa1.74□□□□□ -2.13
RPN9YDR427W YRF1-5P0CX21 1796 aa1.74□□□□□ -2.13
RPN9YDR427W YRF1-8P0CX22 1796 aa1.74□□□□□ -2.13
RPN9YDR427W RPO31P04051 1460 aa1.74□□□□□ -2.13
RPN9YDR427W SKI3P17883 1432 aaKnown RBP1.74□□□□□ -2.13
RPN9YDR427W MLP2P40457 1679 aa1.74□□□□□ -2.13
RPN9YDR427W PDR18P53756 1333 aa1.73□□□□□ -2.13
RPN9YDR427W MER1P16523 270 aa1.73□□□□□ -2.13
RPN9YDR427W SNC2P33328 115 aa1.73□□□□□ -2.13
RPN9YDR427W YKR045CP36138 183 aa1.73□□□□□ -2.13
RPN9YDR427W CUS2P53830 285 aaPredicted RBP1.73□□□□□ -2.13
RPN9YDR427W COG5P53951 403 aa1.73□□□□□ -2.13
RPN9YDR427W YLR162WQ06235 118 aa1.73□□□□□ -2.13
RPN9YDR427W CSI2Q08054 341 aa1.73□□□□□ -2.13
RPN9YDR427W GPM2Q12008 311 aa1.73□□□□□ -2.13
RPN9YDR427W FSF1Q12029 327 aaKnown RBP1.73□□□□□ -2.13
RPN9YDR427W YFR032C-BQ8TGU2 87 aa1.73□□□□□ -2.13
RPN9YDR427W POL1P13382 1468 aa1.73□□□□□ -2.13
RPN9YDR427W UFD4P33202 1483 aa1.73□□□□□ -2.13
RPN9YDR427W STU1P38198 1513 aa1.72□□□□□ -2.13
RPN9YDR427W YBT1P32386 1661 aa1.72□□□□□ -2.13
RPN9YDR427W YOR1P53049 1477 aa1.72□□□□□ -2.13
RPN9YDR427W JIP3O13555 125 aa1.72□□□□□ -2.13
RPN9YDR427W HTB1P02293 131 aaKnown RBP1.72□□□□□ -2.13
RPN9YDR427W HTB2P02294 131 aa1.72□□□□□ -2.13
RPN9YDR427W URA5P13298 226 aaKnown RBP1.72□□□□□ -2.13
RPN9YDR427W RPB3P16370 318 aaKnown RBP1.72□□□□□ -2.13
RPN9YDR427W BET1P22804 142 aa1.72□□□□□ -2.13
RPN9YDR427W TRM5P38793 499 aa1.72□□□□□ -2.13
RPN9YDR427W AST2P39945 430 aaKnown RBP1.72□□□□□ -2.13
RPN9YDR427W MZM1Q03429 123 aaPredicted RBP1.72□□□□□ -2.13
RPN9YDR427W GRX3Q03835 250 aa1.72□□□□□ -2.13
RPN9YDR427W YMR226CQ05016 267 aaKnown RBP1.72□□□□□ -2.13
RPN9YDR427W ADF1Q2V2Q1 113 aa1.72□□□□□ -2.13
RPN9YDR427W YCL012CQ8J0M4 134 aa1.72□□□□□ -2.13
RPN9YDR427W RPL25P04456 142 aaKnown RBP1.71□□□□□ -2.14
RPN9YDR427W MAG1P22134 296 aaKnown RBP1.71□□□□□ -2.14
RPN9YDR427W UPS2P35200 230 aa1.71□□□□□ -2.14
RPN9YDR427W GAA1P39012 614 aa1.71□□□□□ -2.14
RPN9YDR427W RFC4P40339 323 aaKnown RBP1.71□□□□□ -2.14
RPN9YDR427W GGA1Q06336 557 aa1.71□□□□□ -2.14
RPN9YDR427W YRA1Q12159 226 aaKnown RBP1.71□□□□□ -2.14
RPN9YDR427W FLO9P39712 1322 aa1.7□□□□□ -2.14
RPN9YDR427W ATP15P21306 62 aa1.7□□□□□ -2.14
RPN9YDR427W EAF6P47128 113 aa1.7□□□□□ -2.14
RPN9YDR427W YOL160WQ08321 113 aa1.7□□□□□ -2.14
RPN9YDR427W MDM32Q12171 622 aa1.7□□□□□ -2.14
RPN9YDR427W SPO14P36126 1683 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms