RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	ADH3	P07246	375 aa	Known RBP	5.11	□□□□□ -1.59
SUB2	YDL084W	PDX3	P38075	228 aa	Known RBP	5.11	□□□□□ -1.59
SUB2	YDL084W	GEP4	P38812	185 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	TRR2	P38816	342 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	SYS1	P41544	203 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	THG1	P53215	237 aa	Known RBP	5.11	□□□□□ -1.59
SUB2	YDL084W	CLD1	P53264	445 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	PDR17	P53844	350 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	YKR011C	Q02209	353 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	MRPS16	Q02608	121 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	YOL131W	Q08270	108 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	YOR376W	Q08900	122 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	ERV2	Q12284	196 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	HUT1	Q12520	339 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	YNR034W-A	Q3E841	98 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	IGO2	Q9P305	131 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	TY4B-H	P0C2J7	1802 aa		5.11	□□□□□ -1.59
SUB2	YDL084W	VTH1	P40438	1549 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	VTH2	P40890	1549 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	YOL163W	P0CF20	169 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	RPL20A	P0CX23	172 aa	Known RBP	5.1	□□□□□ -1.59
SUB2	YDL084W	RPL20B	P0CX24	172 aa	Predicted RBP	5.1	□□□□□ -1.59
SUB2	YDL084W	INO4	P13902	151 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	MRPL6	P32904	214 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	CLB6	P32943	380 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	YKL187C	P34231	750 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	YBR032W	P38223	100 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	PEX22	P39718	180 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	GET2	P40056	285 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	MOB2	P43563	287 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	WSC2	P53832	503 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	YNL095C	P53932	642 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	CYT2	Q00873	224 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	DOT1	Q04089	582 aa	Known RBP	5.1	□□□□□ -1.59
SUB2	YDL084W	ECI1	Q05871	280 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	PIN3	Q06449	215 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	POS5	Q06892	414 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	PAU23	Q07987	124 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	THI20	Q08224	551 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	YPL264C	Q08980	353 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	YPL245W	Q12179	454 aa	Known RBP	5.1	□□□□□ -1.59
SUB2	YDL084W	TIR4	Q12218	487 aa	Predicted RBP	5.1	□□□□□ -1.59
SUB2	YDL084W	UTP23	Q12339	254 aa	Known RBP	5.1	□□□□□ -1.59
SUB2	YDL084W	PAU17	Q12370	124 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	MED11	Q99278	115 aa		5.1	□□□□□ -1.59
SUB2	YDL084W	DNF1	P32660	1571 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	RPL2A	P0CX45	254 aa	Known RBP	5.09	□□□□□ -1.59
SUB2	YDL084W	RPL2B	P0CX46	254 aa	Known RBP	5.09	□□□□□ -1.59
SUB2	YDL084W	ERS1	P17261	260 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	ATG15	P25641	520 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	ATS1	P31386	333 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	TMA19	P35691	167 aa	Known RBP	5.09	□□□□□ -1.59
SUB2	YDL084W	NDT80	P38830	627 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	YHR177W	P38867	453 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	MIT1	P40002	666 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	HMF1	P40037	129 aa	Known RBP	5.09	□□□□□ -1.59
SUB2	YDL084W	VFA1	P40080	203 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	DLS1	P40366	167 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	XBP1	P40489	647 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	SAS2	P40963	338 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	POP1	P41812	875 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	YFR045W	P43617	309 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	SDT1	P53078	280 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	PRM8	P53174	237 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	CPR8	P53728	308 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	BSP1	Q06604	576 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	PBP4	Q07362	185 aa	Known RBP	5.09	□□□□□ -1.59
SUB2	YDL084W	RRS1	Q08746	203 aa	Known RBP	5.09	□□□□□ -1.59
SUB2	YDL084W	YLR126C	Q12288	251 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	YPR145C-A	Q2V2P0	78 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	VMA9	Q3E7B6	73 aa		5.09	□□□□□ -1.59
SUB2	YDL084W	ILV1	P00927	576 aa	Known RBP	5.08	□□□□□ -1.6
SUB2	YDL084W	SNF4	P12904	322 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	RPB3	P16370	318 aa	Known RBP	5.08	□□□□□ -1.6
SUB2	YDL084W	MKK1	P32490	508 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	COX13	P32799	129 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	AVT7	P40501	490 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	EGT2	P42835	1041 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	TTI2	P47168	421 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	ERG25	P53045	309 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	YGR219W	P53307	113 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	CPD1	P53314	239 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	YIF1	P53845	314 aa	Known RBP	5.08	□□□□□ -1.6
SUB2	YDL084W	YMR087W	Q04299	284 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	ASA1	Q06822	443 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	YLR042C	Q07990	161 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	CSI2	Q08054	341 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	YPR053C	Q6Q5F3	151 aa		5.08	□□□□□ -1.6
SUB2	YDL084W	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.07	□□□□□ -1.6
SUB2	YDL084W	COX10	P21592	462 aa		5.07	□□□□□ -1.6
SUB2	YDL084W	MRPL11	P36521	249 aa	Predicted RBP	5.07	□□□□□ -1.6
SUB2	YDL084W	SDH4	P37298	181 aa		5.07	□□□□□ -1.6
SUB2	YDL084W	TEM1	P38987	245 aa		5.07	□□□□□ -1.6
SUB2	YDL084W	YER079W	P40052	210 aa	Known RBP	5.07	□□□□□ -1.6
SUB2	YDL084W	MSL1	P40567	111 aa	Predicted RBP	5.07	□□□□□ -1.6
SUB2	YDL084W	YNL320W	P42840	284 aa		5.07	□□□□□ -1.6
SUB2	YDL084W	PFS2	P42841	465 aa	Known RBP	5.07	□□□□□ -1.6
SUB2	YDL084W	PAM16	P42949	149 aa		5.07	□□□□□ -1.6
SUB2	YDL084W	SFT1	P43682	97 aa		5.07	□□□□□ -1.6
SUB2	YDL084W	PRY1	P47032	299 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms