RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C ECM15P35195 104 aa0.96□□□□□ -2.26
VAM6YDL077C PAN3P36102 679 aaPredicted RBP0.96□□□□□ -2.26
VAM6YDL077C SHB17P36136 271 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C MRPL11P36521 249 aaPredicted RBP0.96□□□□□ -2.26
VAM6YDL077C EHT1P38295 451 aa0.96□□□□□ -2.26
VAM6YDL077C PSD1P39006 500 aa0.96□□□□□ -2.26
VAM6YDL077C EAF5P39995 279 aa0.96□□□□□ -2.26
VAM6YDL077C YER085CP40058 173 aa0.96□□□□□ -2.26
VAM6YDL077C FAU1P40099 211 aa0.96□□□□□ -2.26
VAM6YDL077C PRM5P40476 318 aa0.96□□□□□ -2.26
VAM6YDL077C MAF1P41910 395 aa0.96□□□□□ -2.26
VAM6YDL077C ERJ5P43613 295 aaPredicted RBP0.96□□□□□ -2.26
VAM6YDL077C BNS1P50084 137 aa0.96□□□□□ -2.26
VAM6YDL077C MIC26P50087 233 aa0.96□□□□□ -2.26
VAM6YDL077C TPC1P53257 314 aa0.96□□□□□ -2.26
VAM6YDL077C PDR16P53860 351 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C PGA1P53896 198 aa0.96□□□□□ -2.26
VAM6YDL077C YNL092WP53934 400 aa0.96□□□□□ -2.26
VAM6YDL077C EFM6P53970 246 aa0.96□□□□□ -2.26
VAM6YDL077C ABF2Q02486 183 aa0.96□□□□□ -2.26
VAM6YDL077C YMR210WQ03649 449 aa0.96□□□□□ -2.26
VAM6YDL077C YML083CQ04526 418 aa0.96□□□□□ -2.26
VAM6YDL077C SEI1Q06058 285 aa0.96□□□□□ -2.26
VAM6YDL077C SHH4Q06236 168 aa0.96□□□□□ -2.26
VAM6YDL077C ATG33Q06485 197 aa0.96□□□□□ -2.26
VAM6YDL077C YOL159CQ08300 171 aa0.96□□□□□ -2.26
VAM6YDL077C NAT5Q08689 176 aa0.96□□□□□ -2.26
VAM6YDL077C PFA4Q12006 378 aa0.96□□□□□ -2.26
VAM6YDL077C ATG41Q12048 136 aa0.96□□□□□ -2.26
VAM6YDL077C YDL157CQ12082 118 aa0.96□□□□□ -2.26
VAM6YDL077C MSL5Q12186 476 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26not detected
VAM6YDL077C RPL7BQ12213 244 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C YGL194C-AQ2V2P6 80 aa0.96□□□□□ -2.26
VAM6YDL077C YLR363W-AQ3E747 85 aa0.96□□□□□ -2.26
VAM6YDL077C YMR030W-AQ3E760 96 aa0.96□□□□□ -2.26
VAM6YDL077C ISD11Q6Q560 94 aa0.96□□□□□ -2.26
VAM6YDL077C UBR1P19812 1950 aa0.96□□□□□ -2.26
VAM6YDL077C YLR415CO13578 112 aa0.96□□□□□ -2.26
VAM6YDL077C HEM13P11353 328 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C RPB10P22139 70 aa0.96□□□□□ -2.26
VAM6YDL077C MF(ALPHA)2P32435 120 aa0.96□□□□□ -2.26
VAM6YDL077C PPZ2P33329 710 aa0.96□□□□□ -2.26
VAM6YDL077C YKL044WP36092 106 aa0.96□□□□□ -2.26
VAM6YDL077C TCD2P36101 447 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C PAU24P38155 120 aa0.96□□□□□ -2.26
VAM6YDL077C MRP21P38175 177 aa0.96□□□□□ -2.26
VAM6YDL077C REG2P38232 338 aa0.96□□□□□ -2.26
VAM6YDL077C HTD2P38790 280 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C YEL068CP39977 110 aa0.96□□□□□ -2.26
VAM6YDL077C CYB5P40312 120 aa0.96□□□□□ -2.26
VAM6YDL077C LRO1P40345 661 aa0.96□□□□□ -2.26
VAM6YDL077C YJL213WP40896 331 aa0.96□□□□□ -2.26
VAM6YDL077C GPI2P46961 280 aa0.96□□□□□ -2.26
VAM6YDL077C SBH1P52870 82 aa0.96□□□□□ -2.26
VAM6YDL077C YGL230CP53074 147 aa0.96□□□□□ -2.26
VAM6YDL077C BOL2P53082 120 aa0.96□□□□□ -2.26
VAM6YDL077C PAU4P53427 120 aa0.96□□□□□ -2.26
VAM6YDL077C SKO1Q02100 647 aa0.96□□□□□ -2.26
VAM6YDL077C GIP3Q03016 1276 aa0.96□□□□□ -2.26
VAM6YDL077C YDR415CQ04033 374 aaPredicted RBP0.96□□□□□ -2.26
VAM6YDL077C INM2Q05533 292 aa0.96□□□□□ -2.26
VAM6YDL077C SYM1Q06563 197 aa0.96□□□□□ -2.26
VAM6YDL077C POS5Q06892 414 aa0.96□□□□□ -2.26
VAM6YDL077C TEN1Q07921 160 aa0.96□□□□□ -2.26
VAM6YDL077C IZH3Q07959 543 aa0.96□□□□□ -2.26
VAM6YDL077C YOL029CQ08187 201 aa0.96□□□□□ -2.26
VAM6YDL077C HSP33Q08914 237 aaKnown RBP0.96□□□□□ -2.26
VAM6YDL077C PRM3Q08931 133 aa0.96□□□□□ -2.26
VAM6YDL077C FRE7Q12333 620 aa0.96□□□□□ -2.26
VAM6YDL077C YPR071WQ12346 211 aa0.96□□□□□ -2.26
VAM6YDL077C JID1Q12350 301 aa0.96□□□□□ -2.26
VAM6YDL077C BOL1Q3E793 110 aa0.96□□□□□ -2.26
VAM6YDL077C YCR075W-AQ3E830 75 aa0.96□□□□□ -2.26
VAM6YDL077C YIL134C-AQ45U18 67 aa0.96□□□□□ -2.26
VAM6YDL077C ADH1P00330 348 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C COX2P00410 251 aa0.95□□□□□ -2.26
VAM6YDL077C DFR1P07807 211 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
VAM6YDL077C UBC5P15732 148 aa0.95□□□□□ -2.26
VAM6YDL077C NUP1P20676 1076 aa0.95□□□□□ -2.26
VAM6YDL077C MDH2P22133 377 aa0.95□□□□□ -2.26
VAM6YDL077C PCL1P24867 279 aa0.95□□□□□ -2.26
VAM6YDL077C YGL010WP25338 174 aa0.95□□□□□ -2.26
VAM6YDL077C MRP20P32387 263 aa0.95□□□□□ -2.26
VAM6YDL077C REC114P32841 428 aa0.95□□□□□ -2.26
VAM6YDL077C AIM26P32858 118 aa0.95□□□□□ -2.26
VAM6YDL077C NTF2P33331 125 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C SGE1P33335 543 aa0.95□□□□□ -2.26
VAM6YDL077C YKR070WP36151 352 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C THI2P38141 450 aa0.95□□□□□ -2.26
VAM6YDL077C YPT10P38146 199 aa0.95□□□□□ -2.26
VAM6YDL077C SHE1P38200 338 aa0.95□□□□□ -2.26
VAM6YDL077C YBL029WP38201 376 aa0.95□□□□□ -2.26
VAM6YDL077C YHL026CP38740 315 aa0.95□□□□□ -2.26
VAM6YDL077C YHR138CP38841 114 aaPredicted RBP0.95□□□□□ -2.26
VAM6YDL077C LTP1P40347 161 aa0.95□□□□□ -2.26
VAM6YDL077C IST3P40565 148 aaPredicted RBP0.95□□□□□ -2.26
VAM6YDL077C YIR016WP40572 265 aa0.95□□□□□ -2.26
VAM6YDL077C GZF3P42944 551 aaKnown RBP0.95□□□□□ -2.26
VAM6YDL077C OTU1P43558 301 aa0.95□□□□□ -2.26
VAM6YDL077C YGL118CP53132 145 aa0.95□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms