RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W YIL029CP40538 142 aa2.9□□□□□ -1.95
NUP60YAR002W EMC5P40540 141 aa2.9□□□□□ -1.95
NUP60YAR002W OST1P41543 476 aaKnown RBP2.9□□□□□ -1.95
NUP60YAR002W YFL015CP43578 164 aa2.9□□□□□ -1.95
NUP60YAR002W RPA34P47006 233 aaPredicted RBP2.9□□□□□ -1.95
NUP60YAR002W HAM1P47119 197 aaKnown RBP2.9□□□□□ -1.95
NUP60YAR002W SOL1P50278 321 aa2.9□□□□□ -1.95
NUP60YAR002W FMP41P53889 259 aaKnown RBP2.9□□□□□ -1.95
NUP60YAR002W YNL092WP53934 400 aa2.9□□□□□ -1.95
NUP60YAR002W APJ1P53940 528 aa2.9□□□□□ -1.95
NUP60YAR002W MEH1Q02205 184 aa2.9□□□□□ -1.95
NUP60YAR002W RCE1Q03530 315 aa2.9□□□□□ -1.95
NUP60YAR002W NCE102Q12207 173 aaRIP-Chip data2.9□□□□□ -1.95not detected
NUP60YAR002W PRS5Q12265 496 aaKnown RBP2.9□□□□□ -1.95
NUP60YAR002W BLM10P43583 2143 aa2.89□□□□□ -1.95
NUP60YAR002W TDH1P00360 332 aaKnown RBP2.89□□□□□ -1.95
NUP60YAR002W MRP2P10663 115 aaPredicted RBP2.89□□□□□ -1.95
NUP60YAR002W MSI1P13712 422 aa2.89□□□□□ -1.95
NUP60YAR002W MRS4P23500 304 aa2.89□□□□□ -1.95
NUP60YAR002W MNS1P32906 549 aa2.89□□□□□ -1.95
NUP60YAR002W YKL162CP36052 402 aa2.89□□□□□ -1.95
NUP60YAR002W PRS2P38620 318 aaKnown RBP2.89□□□□□ -1.95
NUP60YAR002W FLX1P40464 311 aa2.89□□□□□ -1.95
NUP60YAR002W SEC24P40482 926 aaKnown RBP2.89□□□□□ -1.95
NUP60YAR002W YIL024CP40543 189 aa2.89□□□□□ -1.95
NUP60YAR002W MRX5P47007 382 aa2.89□□□□□ -1.95
NUP60YAR002W YJR012CP47087 207 aa2.89□□□□□ -1.95
NUP60YAR002W YIF1P53845 314 aaKnown RBP2.89□□□□□ -1.95
NUP60YAR002W YCL001W-AP87012 153 aa2.89□□□□□ -1.95
NUP60YAR002W YMR254CQ04838 102 aa2.89□□□□□ -1.95
NUP60YAR002W YPR098CQ06089 161 aa2.89□□□□□ -1.95
NUP60YAR002W PIN3Q06449 215 aa2.89□□□□□ -1.95
NUP60YAR002W RAF1Q06891 181 aa2.89□□□□□ -1.95
NUP60YAR002W YDL242WQ07746 117 aa2.89□□□□□ -1.95
NUP60YAR002W SDO1Q07953 250 aaKnown RBP2.89□□□□□ -1.95
NUP60YAR002W FIT3Q08907 204 aa2.89□□□□□ -1.95
NUP60YAR002W FRE8Q12209 686 aa2.89□□□□□ -1.95
NUP60YAR002W MPD1Q12404 318 aaKnown RBP2.89□□□□□ -1.95
NUP60YAR002W YPR108W-AQ3E7B3 70 aa2.89□□□□□ -1.95
NUP60YAR002W PCC1Q3E833 88 aa2.89□□□□□ -1.95
NUP60YAR002W SEC16P48415 2195 aaKnown RBP2.88□□□□□ -1.95
NUP60YAR002W ATG15P25641 520 aa2.88□□□□□ -1.95
NUP60YAR002W IMP1P28627 190 aa2.88□□□□□ -1.95
NUP60YAR002W MSK1P32048 576 aa2.88□□□□□ -1.95
NUP60YAR002W ECM31P38122 312 aa2.88□□□□□ -1.95
NUP60YAR002W SWD3P38123 315 aa2.88□□□□□ -1.95
NUP60YAR002W SHG1P38337 142 aa2.88□□□□□ -1.95
NUP60YAR002W YEL057CP39983 233 aa2.88□□□□□ -1.95
NUP60YAR002W YEA4P40004 342 aa2.88□□□□□ -1.95
NUP60YAR002W RFC2P40348 353 aa2.88□□□□□ -1.95
NUP60YAR002W PRM5P40476 318 aa2.88□□□□□ -1.95
NUP60YAR002W EGT2P42835 1041 aa2.88□□□□□ -1.95
NUP60YAR002W YIP5P53108 310 aa2.88□□□□□ -1.95
NUP60YAR002W MSO1P53604 210 aaKnown RBP2.88□□□□□ -1.95
NUP60YAR002W CAF40P53829 373 aa2.88□□□□□ -1.95
NUP60YAR002W MRPS17Q03246 237 aaPredicted RBP2.88□□□□□ -1.95
NUP60YAR002W TSA2Q04120 196 aa2.88□□□□□ -1.95
NUP60YAR002W YOL029CQ08187 201 aa2.88□□□□□ -1.95
NUP60YAR002W ATP16Q12165 160 aa2.88□□□□□ -1.95
NUP60YAR002W AIM45Q12480 344 aaKnown RBP2.88□□□□□ -1.95
NUP60YAR002W ATG40Q99325 256 aa2.88□□□□□ -1.95
NUP60YAR002W ACC1Q00955 2233 aaKnown RBP2.87□□□□□ -1.95
NUP60YAR002W GDH1P07262 454 aaKnown RBP2.87□□□□□ -1.95
NUP60YAR002W AQY1P0CD91 305 aa2.87□□□□□ -1.95
NUP60YAR002W YML003WP0CF16 290 aa2.87□□□□□ -1.95
NUP60YAR002W SIP1P32578 815 aa2.87□□□□□ -1.95
NUP60YAR002W YUH1P35127 236 aa2.87□□□□□ -1.95
NUP60YAR002W NTC20P38302 140 aaPredicted RBP2.87□□□□□ -1.95
NUP60YAR002W SLM6P38343 150 aa2.87□□□□□ -1.95
NUP60YAR002W YMR262WP38430 313 aa2.87□□□□□ -1.95
NUP60YAR002W IKI1P38874 309 aa2.87□□□□□ -1.95
NUP60YAR002W SPC25P40014 221 aa2.87□□□□□ -1.95
NUP60YAR002W POG1P40473 351 aa2.87□□□□□ -1.95
NUP60YAR002W SLM1P40485 686 aa2.87□□□□□ -1.95
NUP60YAR002W PHB1P40961 287 aa2.87□□□□□ -1.95
NUP60YAR002W TAX4P47030 604 aa2.87□□□□□ -1.95
NUP60YAR002W YJR056CP47115 236 aa2.87□□□□□ -1.95
NUP60YAR002W SIP18P50263 79 aa2.87□□□□□ -1.95
NUP60YAR002W SKO1Q02100 647 aa2.87□□□□□ -1.95
NUP60YAR002W YMR279CQ03263 540 aa2.87□□□□□ -1.95
NUP60YAR002W YDR415CQ04033 374 aaPredicted RBP2.87□□□□□ -1.95
NUP60YAR002W YMR082CQ04276 118 aa2.87□□□□□ -1.95
NUP60YAR002W DPB4Q04603 196 aaKnown RBP2.87□□□□□ -1.95
NUP60YAR002W UPS1Q05776 175 aa2.87□□□□□ -1.95
NUP60YAR002W YOL118CQ08259 102 aa2.87□□□□□ -1.95
NUP60YAR002W RRS1Q08746 203 aaKnown RBP2.87□□□□□ -1.95
NUP60YAR002W COX19Q3E731 98 aa2.87□□□□□ -1.95
NUP60YAR002W YOR192C-CQ3E736 78 aa2.87□□□□□ -1.95
NUP60YAR002W COA2Q3E823 68 aa2.87□□□□□ -1.95
NUP60YAR002W HUG1Q6Q5K6 68 aa2.87□□□□□ -1.95
NUP60YAR002W HEM4P06174 275 aa2.86□□□□□ -1.95
NUP60YAR002W RPL35AP0CX84 120 aaKnown RBP2.86□□□□□ -1.95
NUP60YAR002W RPL35BP0CX85 120 aaKnown RBP2.86□□□□□ -1.95
NUP60YAR002W CLB6P32943 380 aa2.86□□□□□ -1.95
NUP60YAR002W HOT13P36078 116 aa2.86□□□□□ -1.95
NUP60YAR002W YBR292CP38357 123 aa2.86□□□□□ -1.95
NUP60YAR002W PRS3P38689 320 aaKnown RBP2.86□□□□□ -1.95
NUP60YAR002W HHO1P53551 258 aa2.86□□□□□ -1.95
NUP60YAR002W YNR066CP53752 436 aa2.86□□□□□ -1.95
NUP60YAR002W YPL077CQ02831 240 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms